Guide to the Human Genome
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Name: LYZL6 Sequence: fasta or formatted (148aa) NCBI GI: 9966905
Description:

lysozyme-like 6

Referenced in:

Galactose and Lactose

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1          9           1
 C cysteine            5.4          8           1
 D aspartate           6.1          9           1
 E glutamate           4.1          6           1
 F phenylalanine       4.7          7           1
 G glycine             6.1          9           1
 H histidine           2.7          4           1
 I isoleucine          4.7          7           1
 K lysine              3.4          5           1
 L leucine            15.5         23           2
 M methionine          1.4          2           1
 N asparagine          7.4         11           2
 P proline             1.4          2           1
 Q glutamine           3.4          5           1
 R arginine            4.7          7           1
 S serine              9.5         14           2
 T threonine           1.4          2           1
 V valine              4.1          6           1
 W tryptophan          3.4          5           1
 Y tyrosine            4.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysozyme-like 6 
SPACA5                0.426   sperm acrosome associated 5 
SPACA5B               0.426   sperm acrosome associated 5B 
SPACA3                0.392   sperm acrosome associated 3 
LYZL1                 0.344   lysozyme-like 1 
LYZ                   0.340   lysozyme precursor 
LYZL2                 0.337   lysozyme-like 2 
LYZL4                 0.326   lysozyme-like 4 
LALBA                 0.175   lactalbumin, alpha- precursor 
CAPS2                 0.010   calcyphosine 2 
PAPPA                 0.007   pregnancy-associated plasma protein A preproprotein ...
IPP                   0.007   intracisternal A particle-promoted polypeptide isofor...
SMPD3                 0.007   neutral sphingomyelin phosphodiesterase 3 
IPP                   0.007   intracisternal A particle-promoted polypeptide isof...
MYO18A                0.007   myosin 18A isoform b 
MYO18A                0.007   myosin 18A isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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