Guide to the Human Genome
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Name: SPACA5 Sequence: fasta or formatted (159aa) NCBI GI: 118498373
Description:

sperm acrosome associated 5

Referenced in:

Galactose and Lactose

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         11           2
 C cysteine            5.0          8           1
 D aspartate           8.2         13           2
 E glutamate           3.8          6           1
 F phenylalanine       1.9          3           1
 G glycine             8.2         13           1
 H histidine           5.7          9           1
 I isoleucine          5.0          8           1
 K lysine              5.0          8           1
 L leucine             9.4         15           2
 M methionine          3.1          5           1
 N asparagine          4.4          7           1
 P proline             2.5          4           1
 Q glutamine           1.9          3           1
 R arginine            3.8          6           1
 S serine              6.3         10           2
 T threonine           5.0          8           1
 V valine              6.3         10           3
 W tryptophan          4.4          7           2
 Y tyrosine            3.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sperm acrosome associated 5 
SPACA5B               1.000   sperm acrosome associated 5B 
SPACA3                0.389   sperm acrosome associated 3 
LYZL6                 0.383   lysozyme-like 6 
LYZL1                 0.383   lysozyme-like 1 
LYZL2                 0.370   lysozyme-like 2 
LYZ                   0.367   lysozyme precursor 
LYZL4                 0.269   lysozyme-like 4 
LALBA                 0.176   lactalbumin, alpha- precursor 
FRAS1                 0.019   Fraser syndrome 1 
TGFBI                 0.009   transforming growth factor, beta-induced, 68kDa precu...
RGS16                 0.009   regulator of G-protein signalling 16 
WDR24                 0.009   WD repeat domain 24 
MAD2L2                0.006   MAD2 homolog 
MAD2L2                0.006   MAD2 homolog 
COMTD1                0.006   catechol-O-methyltransferase domain containing 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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