BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo sapiens] (434 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo... 874 0.0 gi|30520329 lysophosphatidic acid acyltransferase zeta precursor... 614 e-176 gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo sapi... 67 3e-11 gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo sapi... 64 3e-10 gi|33946291 lysophosphatidylcholine acyltransferase 1 [Homo sapi... 57 4e-08 gi|5453718 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo ... 33 0.39 gi|15100175 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo... 33 0.39 gi|226371746 peptide transporter 2 isoform a [Homo sapiens] 32 1.1 gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens] 31 2.5 gi|6041665 1-acylglycerol-3-phosphate O-acyltransferase 2 isofor... 30 3.3 gi|209862760 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, ... 30 4.3 gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform ... 29 7.3 gi|57863295 hypothetical protein LOC23313 isoform b [Homo sapiens] 29 7.3 gi|57863293 hypothetical protein LOC23313 isoform a [Homo sapiens] 29 7.3 gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] 29 9.5 gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] 29 9.5 gi|4503549 neutrophil elastase preproprotein [Homo sapiens] 29 9.5 >gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo sapiens] Length = 434 Score = 874 bits (2257), Expect = 0.0 Identities = 434/434 (100%), Positives = 434/434 (100%) Query: 1 MEGAELAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTPKE 60 MEGAELAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTPKE Sbjct: 1 MEGAELAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTPKE 60 Query: 61 SILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVTQRFSSEE 120 SILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVTQRFSSEE Sbjct: 61 SILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVTQRFSSEE 120 Query: 121 LVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQ 180 LVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQ Sbjct: 121 LVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQ 180 Query: 181 LPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPIDVLILTT 240 LPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPIDVLILTT Sbjct: 181 LPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPIDVLILTT 240 Query: 241 DGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLPILI 300 DGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLPILI Sbjct: 241 DGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLPILI 300 Query: 301 FPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSW 360 FPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSW Sbjct: 301 FPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSW 360 Query: 361 AIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDIFKEEQQ 420 AIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDIFKEEQQ Sbjct: 361 AIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDIFKEEQQ 420 Query: 421 KNYSKMIVGNGSLS 434 KNYSKMIVGNGSLS Sbjct: 421 KNYSKMIVGNGSLS 434 >gi|30520329 lysophosphatidic acid acyltransferase zeta precursor [Homo sapiens] Length = 456 Score = 614 bits (1583), Expect = e-176 Identities = 301/436 (69%), Positives = 356/436 (81%), Gaps = 11/436 (2%) Query: 6 LAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTP-KESILK 64 L G L+ TL+L FI++P++FGVS GI ++YMK L+K WAT+R+E+G K L Sbjct: 14 LLGISLTVLFTLLLVFIIVPAIFGVSFGIRKLYMKSLLKIFAWATLRMERGAKEKNHQLY 73 Query: 65 NSASVGIIQRDESPMEKGLSGLRGR----------DFELSDVFYFSKKGLEAIVEDEVTQ 114 + GII +D + +E+ + +R +FELSD+FYF +KG+E I++DEVT+ Sbjct: 74 KPYTNGIIAKDPTSLEEEIKEIRRSGSSKALDNTPEFELSDIFYFCRKGMETIMDDEVTK 133 Query: 115 RFSSEELVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIG 174 RFS+EEL SWNLL+RTN NFQYISLRLT++W LGV++RYC LLPLR+ LAF GISLLV+G Sbjct: 134 RFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVVG 193 Query: 175 TTLVGQLPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPID 234 TT+VG LP+ K ++S+ VHL C RICVRAL+ I YH+++ RP+ GGICVANHTSPID Sbjct: 194 TTVVGYLPNGRFKEFMSKHVHLMCYRICVRALTAIITYHDRENRPRNGGICVANHTSPID 253 Query: 235 VLILTTDGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKK 294 V+IL +DG YAMVGQVHGGLMG+IQRAMVKACPHVWFERSE+KDRHLV KRL EH+ DK Sbjct: 254 VIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKS 313 Query: 295 KLPILIFPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLL 354 KLPILIFPEGTCINNTSVMMFKKGSFEIG T++PVAIKY+PQFGDAFWNSSKY MV+YLL Sbjct: 314 KLPILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWNSSKYGMVTYLL 373 Query: 355 RMMTSWAIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDI 414 RMMTSWAIVC VWY+PPMTRE EDAVQFANRVKSAIA QGGL +L WDGGLKR KVKD Sbjct: 374 RMMTSWAIVCSVWYLPPMTREADEDAVQFANRVKSAIARQGGLVDLLWDGGLKREKVKDT 433 Query: 415 FKEEQQKNYSKMIVGN 430 FKEEQQK YSKMIVGN Sbjct: 434 FKEEQQKLYSKMIVGN 449 >gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo sapiens] Length = 544 Score = 67.0 bits (162), Expect = 3e-11 Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 19/267 (7%) Query: 138 SLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLL----VIGTTLVGQLPDSSLKNWLSEL 193 S R + +LG+I LLP+RV L + + L I T + + W ++ Sbjct: 52 SARRVQIVLLGII-----LLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGWRRKI 106 Query: 194 VHLTCCRICVRALSGTIHY----HNKQYRPQKGGICVAN-HTSPIDVLILTTDGCYAMVG 248 T + RA+ ++ + K P + + VA H++ D + G +MV Sbjct: 107 TQ-TALKFLGRAMFFSMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGLPSMVS 165 Query: 249 QVHGGLMGIIQRAMVKACPHVWFERSEMKDR-HLVTKRLKEHIADKKKLPILIFPEGTCI 307 + + +I R +++A V R + R + + + +K + + IL+FPEGTC Sbjct: 166 RNENAQVPLIGR-LLRAVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVFPEGTCT 224 Query: 308 NNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVW 367 N + ++ FK G+F G + PV ++Y + W Y + + +V Sbjct: 225 NRSCLITFKPGAFIPGVPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFTKVEVE 284 Query: 368 YMPPM--TREEGEDAVQFANRVKSAIA 392 +MP EE D V FAN+V++ +A Sbjct: 285 FMPVQVPNDEEKNDPVLFANKVRNLMA 311 >gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo sapiens] Length = 524 Score = 63.5 bits (153), Expect = 3e-10 Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 22/276 (7%) Query: 151 VRYCVL----LPLRVTLAFIGISLLVIGTTL-VGQLPDSSLKNWLSELVHLTCCRICVRA 205 V++C+L P+RV LAFI + LL L V L + L+ ++ T C V Sbjct: 37 VKFCLLGALLAPIRVLLAFIVLFLLWPFAWLQVAGLSEEQLQEPITGW-RKTVCHNGVLG 95 Query: 206 LSGTIHY----------HNKQYRPQKGGICVANHTSPIDVLILTTDGCYAMVGQVHGGLM 255 LS + + + R Q + A H++ D ++L +V + + Sbjct: 96 LSRLLFFLLGFLRIRVRGQRASRLQAPVLVAAPHSTFFDPIVLLPCDLPKVVSRAENLSV 155 Query: 256 GIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLP-ILIFPEGTCINNTSVMM 314 +I A+++ + R + R V + ++ K P +L FPEGTC N +++ Sbjct: 156 PVIG-ALLRFNQAILVSRHDPASRRRVVEEVRRRATSGGKWPQVLFFPEGTCSNKKALLK 214 Query: 315 FKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVWYMPPM-- 372 FK G+F G + PV I+Y W ++ L + + DV ++P Sbjct: 215 FKPGAFIAGVPVQPVLIRYPNSLDTTSWAWRGPGVLKVLWLTASQPCSIVDVEFLPVYHP 274 Query: 373 TREEGEDAVQFANRVKSAIAIQGGL--TELPWDGGL 406 + EE D +AN V+ +A G+ TE + G L Sbjct: 275 SPEESRDPTLYANNVQRVMAQALGIPATECEFVGSL 310 >gi|33946291 lysophosphatidylcholine acyltransferase 1 [Homo sapiens] Length = 534 Score = 56.6 bits (135), Expect = 4e-08 Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 16/267 (5%) Query: 139 LRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQL------PDSSLKNWLSE 192 LRL+ + V + L P+R+ +A + LL LV L P+ W Sbjct: 36 LRLSALQKAQVALMTLTLFPVRLLVA-AAMMLLAWPLALVASLGSAEKEPEQPPALWRKV 94 Query: 193 LVHLTCCRICVRALSGTIH---YHNKQYRPQKGGIC-VANHTSPIDVLILTTDGCYAMVG 248 + L + +G H +Q P + I +A H+S D + +T ++ Sbjct: 95 VDFLLKAIMRTMWFAGGFHRVAVKGRQALPTEAAILTLAPHSSYFDAIPVTMTMSSIVMK 154 Query: 249 QVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLP-ILIFPEGTCI 307 + I +++ V+ RS+ R + +K K P I+IFPEGTC Sbjct: 155 AESRDIP--IWGTLIQYIRPVFVSRSDQDSRRKTVEEIKRRAQSNGKWPQIMIFPEGTCT 212 Query: 308 NNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVW 367 N T ++ FK G+F G + PV ++Y + W + L + + ++ Sbjct: 213 NRTCLITFKPGAFIPGAPVQPVVLRYPNKLDTITWTWQGPGALEILWLTLCQFHNQVEIE 272 Query: 368 YMP--PMTREEGEDAVQFANRVKSAIA 392 ++P + EE + +A+ V+ +A Sbjct: 273 FLPVYSPSEEEKRNPALYASNVRRVMA 299 >gi|5453718 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo sapiens] Length = 283 Score = 33.5 bits (75), Expect = 0.39 Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 32/187 (17%) Query: 217 YRPQKGGICVANHTSPIDVLILTTDGCYAMVGQVHGGLMGIIQRAMVKA---------CP 267 + P + + V+NH S +D+L M+ + G + I +R ++ A Sbjct: 92 FPPSQPYVVVSNHQSSLDLL--------GMMEVLPGRCVPIAKRELLWAGSAGLACWLAG 143 Query: 268 HVWFERSEMKDRHLVTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIH 327 ++ +R D V + + + + + + +FPEGT +N S++ FK+G+F + Sbjct: 144 VIFIDRKRTGDAISVMSEVAQTLLTQD-VRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQ 202 Query: 328 -PVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVWYMPPMTRE--EGEDAVQFA 384 P+ + D + R TS C V +PP+ E +D A Sbjct: 203 VPIVPIVMSSYQDFYCKKE---------RRFTSGQ--CQVRVLPPVPTEGLTPDDVPALA 251 Query: 385 NRVKSAI 391 +RV+ ++ Sbjct: 252 DRVRHSM 258 >gi|15100175 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo sapiens] Length = 283 Score = 33.5 bits (75), Expect = 0.39 Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 32/187 (17%) Query: 217 YRPQKGGICVANHTSPIDVLILTTDGCYAMVGQVHGGLMGIIQRAMVKA---------CP 267 + P + + V+NH S +D+L M+ + G + I +R ++ A Sbjct: 92 FPPSQPYVVVSNHQSSLDLL--------GMMEVLPGRCVPIAKRELLWAGSAGLACWLAG 143 Query: 268 HVWFERSEMKDRHLVTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIH 327 ++ +R D V + + + + + + +FPEGT +N S++ FK+G+F + Sbjct: 144 VIFIDRKRTGDAISVMSEVAQTLLTQD-VRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQ 202 Query: 328 -PVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVWYMPPMTRE--EGEDAVQFA 384 P+ + D + R TS C V +PP+ E +D A Sbjct: 203 VPIVPIVMSSYQDFYCKKE---------RRFTSGQ--CQVRVLPPVPTEGLTPDDVPALA 251 Query: 385 NRVKSAI 391 +RV+ ++ Sbjct: 252 DRVRHSM 258 >gi|226371746 peptide transporter 2 isoform a [Homo sapiens] Length = 729 Score = 32.0 bits (71), Expect = 1.1 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 49/162 (30%) Query: 54 EKGTPKESILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVT 113 +K KE++ + + R SP +K + G ++ LS F IV +E Sbjct: 5 QKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAF---------IVVNEFC 55 Query: 114 QRFSSEEL-----------VSWNLLTRTNVNFQYISL----------------------- 139 +RFS + + WN T T++ + SL Sbjct: 56 ERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTII 115 Query: 140 RLTMVWVLGVIVRYCVLLPL------RVTLAFIGISLLVIGT 175 L++V+VLG +++ LP+ L+ IG+SL+ +GT Sbjct: 116 YLSLVYVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGT 157 >gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens] Length = 305 Score = 30.8 bits (68), Expect = 2.5 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Query: 29 GVSLGISEIYMKILVKTLEWATI--RIEKGTPKESILKNSAS 68 G+S+G+++I IL TL WA R E GT + LKN S Sbjct: 227 GISIGVTQILAMILTITLLWALYYDRREPGTDQMMSLKNDNS 268 >gi|6041665 1-acylglycerol-3-phosphate O-acyltransferase 2 isoform a [Homo sapiens] Length = 278 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/54 (27%), Positives = 28/54 (51%) Query: 293 KKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSK 346 ++ L + I+PEGT +N ++ FKKG+F + + +F+N+ K Sbjct: 162 RENLKVWIYPEGTRNDNGDLLPFKKGAFYLAVQAQVPIVPVVYSSFSSFYNTKK 215 >gi|209862760 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa isoform 2 [Homo sapiens] Length = 153 Score = 30.0 bits (66), Expect = 4.3 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 165 FIGISL-LVIGTTLVGQLPDSSLKNW 189 F G+S+ LV+G+T V LPD +K W Sbjct: 92 FFGVSIILVLGSTFVAYLPDYRMKEW 117 >gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform 2 [Homo sapiens] Length = 2044 Score = 29.3 bits (64), Expect = 7.3 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 231 SPIDVLILTTDGCYAMVGQ--VHGGLMGIIQRAMVKACPHVWFERSEMKD 278 SP+DVLI+ GC + G ++ + + Q+ VKA V+ + KD Sbjct: 592 SPLDVLIIDQLGCLVITGNQYIYQEVWNLFQQISVKASSVVYSATKDYKD 641 >gi|57863295 hypothetical protein LOC23313 isoform b [Homo sapiens] Length = 404 Score = 29.3 bits (64), Expect = 7.3 Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 190 LSELVHLTCCRICVRALSGTIHYHNKQ 216 L +L ++ C +C RA G IH H K+ Sbjct: 110 LQKLDYMVTCAVCTRADGGDIHIHKKK 136 >gi|57863293 hypothetical protein LOC23313 isoform a [Homo sapiens] Length = 409 Score = 29.3 bits (64), Expect = 7.3 Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 190 LSELVHLTCCRICVRALSGTIHYHNKQ 216 L +L ++ C +C RA G IH H K+ Sbjct: 115 LQKLDYMVTCAVCTRADGGDIHIHKKK 141 >gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] Length = 1123 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Query: 282 VTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGG 324 V RLK+ +A+++ P+L +GT I+ FKK + EI G Sbjct: 266 VRSRLKQKVAERRSSPLLRRKDGTVIST-----FKKRAVEITG 303 >gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] Length = 1122 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Query: 282 VTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGG 324 V RLK+ +A+++ P+L +GT I+ FKK + EI G Sbjct: 265 VRSRLKQKVAERRSSPLLRRKDGTVIST-----FKKRAVEITG 302 >gi|4503549 neutrophil elastase preproprotein [Homo sapiens] Length = 267 Score = 28.9 bits (63), Expect = 9.5 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 23/117 (19%) Query: 167 GISLLVIGTTLVGQLPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICV 226 G+ L +G L+G+ + + + L EL +C R+ T+ R ++ G+C Sbjct: 148 GVQCLAMGWGLLGR--NRGIASVLQELNVTVVTSLCRRSNVCTL------VRGRQAGVCF 199 Query: 227 ANHTSPI-------DVLILTTDGC--------YAMVGQVHGGLMGIIQRAMVKACPH 268 + SP+ + GC +A V Q + IIQR+ CPH Sbjct: 200 GDSGSPLVCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQRSEDNPCPH 256 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,582,711 Number of Sequences: 37866 Number of extensions: 657597 Number of successful extensions: 1291 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1279 Number of HSP's gapped (non-prelim): 17 length of query: 434 length of database: 18,247,518 effective HSP length: 105 effective length of query: 329 effective length of database: 14,271,588 effective search space: 4695352452 effective search space used: 4695352452 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.