Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 21362092

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9
[Homo sapiens]
         (434 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo...   874   0.0  
gi|30520329 lysophosphatidic acid acyltransferase zeta precursor...   614   e-176
gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo sapi...    67   3e-11
gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo sapi...    64   3e-10
gi|33946291 lysophosphatidylcholine acyltransferase 1 [Homo sapi...    57   4e-08
gi|5453718 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo ...    33   0.39 
gi|15100175 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo...    33   0.39 
gi|226371746 peptide transporter 2 isoform a [Homo sapiens]            32   1.1  
gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens]        31   2.5  
gi|6041665 1-acylglycerol-3-phosphate O-acyltransferase 2 isofor...    30   3.3  
gi|209862760 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, ...    30   4.3  
gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform ...    29   7.3  
gi|57863295 hypothetical protein LOC23313 isoform b [Homo sapiens]     29   7.3  
gi|57863293 hypothetical protein LOC23313 isoform a [Homo sapiens]     29   7.3  
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]             29   9.5  
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]             29   9.5  
gi|4503549 neutrophil elastase preproprotein [Homo sapiens]            29   9.5  

>gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo
           sapiens]
          Length = 434

 Score =  874 bits (2257), Expect = 0.0
 Identities = 434/434 (100%), Positives = 434/434 (100%)

Query: 1   MEGAELAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTPKE 60
           MEGAELAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTPKE
Sbjct: 1   MEGAELAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTPKE 60

Query: 61  SILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVTQRFSSEE 120
           SILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVTQRFSSEE
Sbjct: 61  SILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVTQRFSSEE 120

Query: 121 LVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQ 180
           LVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQ
Sbjct: 121 LVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQ 180

Query: 181 LPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPIDVLILTT 240
           LPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPIDVLILTT
Sbjct: 181 LPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPIDVLILTT 240

Query: 241 DGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLPILI 300
           DGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLPILI
Sbjct: 241 DGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLPILI 300

Query: 301 FPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSW 360
           FPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSW
Sbjct: 301 FPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSW 360

Query: 361 AIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDIFKEEQQ 420
           AIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDIFKEEQQ
Sbjct: 361 AIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDIFKEEQQ 420

Query: 421 KNYSKMIVGNGSLS 434
           KNYSKMIVGNGSLS
Sbjct: 421 KNYSKMIVGNGSLS 434


>gi|30520329 lysophosphatidic acid acyltransferase zeta precursor
           [Homo sapiens]
          Length = 456

 Score =  614 bits (1583), Expect = e-176
 Identities = 301/436 (69%), Positives = 356/436 (81%), Gaps = 11/436 (2%)

Query: 6   LAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTP-KESILK 64
           L G  L+   TL+L FI++P++FGVS GI ++YMK L+K   WAT+R+E+G   K   L 
Sbjct: 14  LLGISLTVLFTLLLVFIIVPAIFGVSFGIRKLYMKSLLKIFAWATLRMERGAKEKNHQLY 73

Query: 65  NSASVGIIQRDESPMEKGLSGLRGR----------DFELSDVFYFSKKGLEAIVEDEVTQ 114
              + GII +D + +E+ +  +R            +FELSD+FYF +KG+E I++DEVT+
Sbjct: 74  KPYTNGIIAKDPTSLEEEIKEIRRSGSSKALDNTPEFELSDIFYFCRKGMETIMDDEVTK 133

Query: 115 RFSSEELVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIG 174
           RFS+EEL SWNLL+RTN NFQYISLRLT++W LGV++RYC LLPLR+ LAF GISLLV+G
Sbjct: 134 RFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVVG 193

Query: 175 TTLVGQLPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPID 234
           TT+VG LP+   K ++S+ VHL C RICVRAL+  I YH+++ RP+ GGICVANHTSPID
Sbjct: 194 TTVVGYLPNGRFKEFMSKHVHLMCYRICVRALTAIITYHDRENRPRNGGICVANHTSPID 253

Query: 235 VLILTTDGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKK 294
           V+IL +DG YAMVGQVHGGLMG+IQRAMVKACPHVWFERSE+KDRHLV KRL EH+ DK 
Sbjct: 254 VIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKS 313

Query: 295 KLPILIFPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLL 354
           KLPILIFPEGTCINNTSVMMFKKGSFEIG T++PVAIKY+PQFGDAFWNSSKY MV+YLL
Sbjct: 314 KLPILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWNSSKYGMVTYLL 373

Query: 355 RMMTSWAIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDI 414
           RMMTSWAIVC VWY+PPMTRE  EDAVQFANRVKSAIA QGGL +L WDGGLKR KVKD 
Sbjct: 374 RMMTSWAIVCSVWYLPPMTREADEDAVQFANRVKSAIARQGGLVDLLWDGGLKREKVKDT 433

Query: 415 FKEEQQKNYSKMIVGN 430
           FKEEQQK YSKMIVGN
Sbjct: 434 FKEEQQKLYSKMIVGN 449


>gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo
           sapiens]
          Length = 544

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 19/267 (7%)

Query: 138 SLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLL----VIGTTLVGQLPDSSLKNWLSEL 193
           S R   + +LG+I     LLP+RV L  + + L      I T    +     +  W  ++
Sbjct: 52  SARRVQIVLLGII-----LLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGWRRKI 106

Query: 194 VHLTCCRICVRALSGTIHY----HNKQYRPQKGGICVAN-HTSPIDVLILTTDGCYAMVG 248
              T  +   RA+  ++ +      K   P +  + VA  H++  D +     G  +MV 
Sbjct: 107 TQ-TALKFLGRAMFFSMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGLPSMVS 165

Query: 249 QVHGGLMGIIQRAMVKACPHVWFERSEMKDR-HLVTKRLKEHIADKKKLPILIFPEGTCI 307
           +     + +I R +++A   V   R +   R + + + +K   +  +   IL+FPEGTC 
Sbjct: 166 RNENAQVPLIGR-LLRAVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVFPEGTCT 224

Query: 308 NNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVW 367
           N + ++ FK G+F  G  + PV ++Y  +     W    Y  +   +          +V 
Sbjct: 225 NRSCLITFKPGAFIPGVPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFTKVEVE 284

Query: 368 YMPPM--TREEGEDAVQFANRVKSAIA 392
           +MP      EE  D V FAN+V++ +A
Sbjct: 285 FMPVQVPNDEEKNDPVLFANKVRNLMA 311


>gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo
           sapiens]
          Length = 524

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 22/276 (7%)

Query: 151 VRYCVL----LPLRVTLAFIGISLLVIGTTL-VGQLPDSSLKNWLSELVHLTCCRICVRA 205
           V++C+L     P+RV LAFI + LL     L V  L +  L+  ++     T C   V  
Sbjct: 37  VKFCLLGALLAPIRVLLAFIVLFLLWPFAWLQVAGLSEEQLQEPITGW-RKTVCHNGVLG 95

Query: 206 LSGTIHY----------HNKQYRPQKGGICVANHTSPIDVLILTTDGCYAMVGQVHGGLM 255
           LS  + +            +  R Q   +  A H++  D ++L       +V +     +
Sbjct: 96  LSRLLFFLLGFLRIRVRGQRASRLQAPVLVAAPHSTFFDPIVLLPCDLPKVVSRAENLSV 155

Query: 256 GIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLP-ILIFPEGTCINNTSVMM 314
            +I  A+++    +   R +   R  V + ++       K P +L FPEGTC N  +++ 
Sbjct: 156 PVIG-ALLRFNQAILVSRHDPASRRRVVEEVRRRATSGGKWPQVLFFPEGTCSNKKALLK 214

Query: 315 FKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVWYMPPM-- 372
           FK G+F  G  + PV I+Y        W      ++  L    +    + DV ++P    
Sbjct: 215 FKPGAFIAGVPVQPVLIRYPNSLDTTSWAWRGPGVLKVLWLTASQPCSIVDVEFLPVYHP 274

Query: 373 TREEGEDAVQFANRVKSAIAIQGGL--TELPWDGGL 406
           + EE  D   +AN V+  +A   G+  TE  + G L
Sbjct: 275 SPEESRDPTLYANNVQRVMAQALGIPATECEFVGSL 310


>gi|33946291 lysophosphatidylcholine acyltransferase 1 [Homo
           sapiens]
          Length = 534

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 16/267 (5%)

Query: 139 LRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQL------PDSSLKNWLSE 192
           LRL+ +    V +    L P+R+ +A   + LL     LV  L      P+     W   
Sbjct: 36  LRLSALQKAQVALMTLTLFPVRLLVA-AAMMLLAWPLALVASLGSAEKEPEQPPALWRKV 94

Query: 193 LVHLTCCRICVRALSGTIH---YHNKQYRPQKGGIC-VANHTSPIDVLILTTDGCYAMVG 248
           +  L    +     +G  H      +Q  P +  I  +A H+S  D + +T      ++ 
Sbjct: 95  VDFLLKAIMRTMWFAGGFHRVAVKGRQALPTEAAILTLAPHSSYFDAIPVTMTMSSIVMK 154

Query: 249 QVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLP-ILIFPEGTCI 307
                +   I   +++    V+  RS+   R    + +K       K P I+IFPEGTC 
Sbjct: 155 AESRDIP--IWGTLIQYIRPVFVSRSDQDSRRKTVEEIKRRAQSNGKWPQIMIFPEGTCT 212

Query: 308 NNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVW 367
           N T ++ FK G+F  G  + PV ++Y  +     W       +  L   +  +    ++ 
Sbjct: 213 NRTCLITFKPGAFIPGAPVQPVVLRYPNKLDTITWTWQGPGALEILWLTLCQFHNQVEIE 272

Query: 368 YMP--PMTREEGEDAVQFANRVKSAIA 392
           ++P    + EE  +   +A+ V+  +A
Sbjct: 273 FLPVYSPSEEEKRNPALYASNVRRVMA 299


>gi|5453718 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo
           sapiens]
          Length = 283

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 32/187 (17%)

Query: 217 YRPQKGGICVANHTSPIDVLILTTDGCYAMVGQVHGGLMGIIQRAMVKA---------CP 267
           + P +  + V+NH S +D+L         M+  + G  + I +R ++ A           
Sbjct: 92  FPPSQPYVVVSNHQSSLDLL--------GMMEVLPGRCVPIAKRELLWAGSAGLACWLAG 143

Query: 268 HVWFERSEMKDRHLVTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIH 327
            ++ +R    D   V   + + +  +  + + +FPEGT  +N S++ FK+G+F +     
Sbjct: 144 VIFIDRKRTGDAISVMSEVAQTLLTQD-VRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQ 202

Query: 328 -PVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVWYMPPMTRE--EGEDAVQFA 384
            P+       + D +             R  TS    C V  +PP+  E    +D    A
Sbjct: 203 VPIVPIVMSSYQDFYCKKE---------RRFTSGQ--CQVRVLPPVPTEGLTPDDVPALA 251

Query: 385 NRVKSAI 391
           +RV+ ++
Sbjct: 252 DRVRHSM 258


>gi|15100175 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo
           sapiens]
          Length = 283

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 32/187 (17%)

Query: 217 YRPQKGGICVANHTSPIDVLILTTDGCYAMVGQVHGGLMGIIQRAMVKA---------CP 267
           + P +  + V+NH S +D+L         M+  + G  + I +R ++ A           
Sbjct: 92  FPPSQPYVVVSNHQSSLDLL--------GMMEVLPGRCVPIAKRELLWAGSAGLACWLAG 143

Query: 268 HVWFERSEMKDRHLVTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIH 327
            ++ +R    D   V   + + +  +  + + +FPEGT  +N S++ FK+G+F +     
Sbjct: 144 VIFIDRKRTGDAISVMSEVAQTLLTQD-VRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQ 202

Query: 328 -PVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVWYMPPMTRE--EGEDAVQFA 384
            P+       + D +             R  TS    C V  +PP+  E    +D    A
Sbjct: 203 VPIVPIVMSSYQDFYCKKE---------RRFTSGQ--CQVRVLPPVPTEGLTPDDVPALA 251

Query: 385 NRVKSAI 391
           +RV+ ++
Sbjct: 252 DRVRHSM 258


>gi|226371746 peptide transporter 2 isoform a [Homo sapiens]
          Length = 729

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 49/162 (30%)

Query: 54  EKGTPKESILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVT 113
           +K   KE++    +   +  R  SP +K    + G ++ LS  F         IV +E  
Sbjct: 5   QKNESKETLFSPVSIEEVPPRPPSPPKKPSPTICGSNYPLSIAF---------IVVNEFC 55

Query: 114 QRFSSEEL-----------VSWNLLTRTNVNFQYISL----------------------- 139
           +RFS   +           + WN  T T++   + SL                       
Sbjct: 56  ERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTII 115

Query: 140 RLTMVWVLGVIVRYCVLLPL------RVTLAFIGISLLVIGT 175
            L++V+VLG +++    LP+         L+ IG+SL+ +GT
Sbjct: 116 YLSLVYVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGT 157


>gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens]
          Length = 305

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 29  GVSLGISEIYMKILVKTLEWATI--RIEKGTPKESILKNSAS 68
           G+S+G+++I   IL  TL WA    R E GT +   LKN  S
Sbjct: 227 GISIGVTQILAMILTITLLWALYYDRREPGTDQMMSLKNDNS 268


>gi|6041665 1-acylglycerol-3-phosphate O-acyltransferase 2 isoform a
           [Homo sapiens]
          Length = 278

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 293 KKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSK 346
           ++ L + I+PEGT  +N  ++ FKKG+F +        +        +F+N+ K
Sbjct: 162 RENLKVWIYPEGTRNDNGDLLPFKKGAFYLAVQAQVPIVPVVYSSFSSFYNTKK 215


>gi|209862760 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11,
           17.3kDa isoform 2 [Homo sapiens]
          Length = 153

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)

Query: 165 FIGISL-LVIGTTLVGQLPDSSLKNW 189
           F G+S+ LV+G+T V  LPD  +K W
Sbjct: 92  FFGVSIILVLGSTFVAYLPDYRMKEW 117


>gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform 2
           [Homo sapiens]
          Length = 2044

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 231 SPIDVLILTTDGCYAMVGQ--VHGGLMGIIQRAMVKACPHVWFERSEMKD 278
           SP+DVLI+   GC  + G   ++  +  + Q+  VKA   V+    + KD
Sbjct: 592 SPLDVLIIDQLGCLVITGNQYIYQEVWNLFQQISVKASSVVYSATKDYKD 641


>gi|57863295 hypothetical protein LOC23313 isoform b [Homo sapiens]
          Length = 404

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 190 LSELVHLTCCRICVRALSGTIHYHNKQ 216
           L +L ++  C +C RA  G IH H K+
Sbjct: 110 LQKLDYMVTCAVCTRADGGDIHIHKKK 136


>gi|57863293 hypothetical protein LOC23313 isoform a [Homo sapiens]
          Length = 409

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 190 LSELVHLTCCRICVRALSGTIHYHNKQ 216
           L +L ++  C +C RA  G IH H K+
Sbjct: 115 LQKLDYMVTCAVCTRADGGDIHIHKKK 141


>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
          Length = 1123

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 282 VTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGG 324
           V  RLK+ +A+++  P+L   +GT I+      FKK + EI G
Sbjct: 266 VRSRLKQKVAERRSSPLLRRKDGTVIST-----FKKRAVEITG 303


>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
          Length = 1122

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 282 VTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGG 324
           V  RLK+ +A+++  P+L   +GT I+      FKK + EI G
Sbjct: 265 VRSRLKQKVAERRSSPLLRRKDGTVIST-----FKKRAVEITG 302


>gi|4503549 neutrophil elastase preproprotein [Homo sapiens]
          Length = 267

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 23/117 (19%)

Query: 167 GISLLVIGTTLVGQLPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICV 226
           G+  L +G  L+G+  +  + + L EL       +C R+   T+       R ++ G+C 
Sbjct: 148 GVQCLAMGWGLLGR--NRGIASVLQELNVTVVTSLCRRSNVCTL------VRGRQAGVCF 199

Query: 227 ANHTSPI-------DVLILTTDGC--------YAMVGQVHGGLMGIIQRAMVKACPH 268
            +  SP+        +      GC        +A V Q    +  IIQR+    CPH
Sbjct: 200 GDSGSPLVCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQRSEDNPCPH 256


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,582,711
Number of Sequences: 37866
Number of extensions: 657597
Number of successful extensions: 1291
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1279
Number of HSP's gapped (non-prelim): 17
length of query: 434
length of database: 18,247,518
effective HSP length: 105
effective length of query: 329
effective length of database: 14,271,588
effective search space: 4695352452
effective search space used: 4695352452
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press