Guide to the Human Genome
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Name: AGPAT1 Sequence: fasta or formatted (283aa) NCBI GI: 5453718
Description:

1-acylglycerol-3-phosphate O-acyltransferase 1

Referenced in:

Lipid Metabolism

Other entries for this name:
alt mRNA [283aa] 1-acylglycerol-3-phosphate O-acyltransferase 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         19           1
 C cysteine            2.1          6           1
 D aspartate           3.9         11           2
 E glutamate           3.2          9           1
 F phenylalanine       5.3         15           2
 G glycine             8.5         24           4
 H histidine           2.5          7           2
 I isoleucine          4.2         12           1
 K lysine              3.9         11           2
 L leucine            13.4         38           5
 M methionine          3.9         11           2
 N asparagine          2.1          6           1
 P proline             6.7         19           2
 Q glutamine           3.2          9           1
 R arginine            6.7         19           2
 S serine              5.3         15           2
 T threonine           3.5         10           1
 V valine              9.5         27           3
 W tryptophan          2.5          7           1
 Y tyrosine            2.8          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   1-acylglycerol-3-phosphate O-acyltransferase 1 
AGPAT1                1.000   1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo...
AGPAT2                0.404   1-acylglycerol-3-phosphate O-acyltransferase 2 isofor...
AGPAT2                0.280   1-acylglycerol-3-phosphate O-acyltransferase 2 isofo...
LPCAT4                0.022   lysophosphatidylcholine acyltransferase 4 
LPCAT1                0.018   lysophosphatidylcholine acyltransferase 1 
AGPAT6                0.016   lysophosphatidic acid acyltransferase zeta precursor...
LPCAT2                0.014   lysophosphatidylcholine acyltransferase 2 
AGPAT9                0.014   1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo...
LCLAT1                0.013   lysocardiolipin acyltransferase 1 isoform 1 
LCLAT1                0.013   lysocardiolipin acyltransferase 1 isoform 2 
TAZ                   0.011   tafazzin isoform 2 
C14orf49              0.009   nesprin-3 
HNRPLL                0.005   heterogeneous nuclear ribonucleoprotein L-like isof...
HNRPLL                0.005   heterogeneous nuclear ribonucleoprotein L-like isofo...
MYC                   0.005   myc proto-oncogene protein 
PAPPA2                0.005   pappalysin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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