VPS53 13024

Name: VPS53	Sequence: fasta or formatted (670aa)		NCBI GI: 21361728
Description: vacuolar protein sorting 53 isoform 2		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [832aa] vacuolar protein sorting 53 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 42 2 C cysteine 2.1 14 1 D aspartate 5.1 34 2 E glutamate 8.8 59 4 F phenylalanine 4.5 30 1 G glycine 4.5 30 2 H histidine 1.9 13 1 I isoleucine 6.4 43 2 K lysine 7.0 47 2 L leucine 10.4 70 3 M methionine 2.4 16 2 N asparagine 3.6 24 1 P proline 4.8 32 3 Q glutamine 5.8 39 2 R arginine 5.1 34 3 S serine 5.1 34 3 T threonine 6.6 44 3 V valine 6.4 43 2 W tryptophan 0.9 6 1 Y tyrosine 2.4 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vacuolar protein sorting 53 isoform 2 VPS53 0.981 vacuolar protein sorting 53 isoform 1 CCDC150 0.013 coiled-coil domain containing 150 CEP290 0.007 centrosomal protein 290kDa GEFT 0.005 RhoA/RAC/CDC42 exchange factor isoform 1 GEFT 0.005 RhoA/RAC/CDC42 exchange factor isoform 3 ZFP64 0.005 zinc finger protein 64 isoform d ZFP64 0.005 zinc finger protein 64 isoform c ZFP64 0.005 zinc finger protein 64 isoform a CNKSR1 0.005 connector enhancer of kinase suppressor of Ras 1 [H... CCDC57 0.005 coiled-coil domain containing 57 CCDC97 0.005 coiled-coil domain containing 97 GPATCH8 0.005 G patch domain containing 8 RTN4 0.004 reticulon 4 isoform E RTN4 0.004 reticulon 4 isoform A NDP 0.004 norrin precursor IKZF1 0.004 zinc finger protein, subfamily 1A, 1 (Ikaros) MPDZ 0.004 multiple PDZ domain protein C11orf2 0.004 chromosome 11 open reading frame2 ZFP64 0.004 zinc finger protein 64 isoform b GPR112 0.004 G-protein coupled receptor 112 ZNF618 0.004 zinc finger protein 618 TBXAS1 0.004 thromboxane A synthase 1, platelet isoform TXS-II [... TBXAS1 0.004 thromboxane A synthase 1, platelet isoform TXS-I [H... TBXAS1 0.004 thromboxane A synthase 1, platelet isoform TXS-I [H... IVL 0.004 involucrin MYH4 0.004 myosin, heavy polypeptide 4, skeletal muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.