Guide to the Human Genome
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Name: TBXAS1 Sequence: fasta or formatted (460aa) NCBI GI: 195972900
Description:

thromboxane A synthase 1, platelet isoform TXS-II

Referenced in:

Arachidonate, Prostaglandins, and Leukotrienes
Cytochrome P450 Enzymes
Platelets and Megakaryocytes

Other entries for this name:
alt prot [534aa] thromboxane A synthase 1, platelet isoform TXS-I
alt prot [534aa] thromboxane A synthase 1, platelet isoform TXS-I
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         36           2
 C cysteine            2.4         11           1
 D aspartate           4.8         22           1
 E glutamate           7.2         33           2
 F phenylalanine       7.0         32           2
 G glycine             4.6         21           1
 H histidine           2.0          9           2
 I isoleucine          4.3         20           2
 K lysine              3.9         18           1
 L leucine            11.3         52           3
 M methionine          3.7         17           2
 N asparagine          3.5         16           1
 P proline             7.0         32           2
 Q glutamine           3.5         16           2
 R arginine            7.0         32           3
 S serine              6.3         29           2
 T threonine           3.5         16           2
 V valine              6.7         31           2
 W tryptophan          1.1          5           1
 Y tyrosine            2.6         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thromboxane A synthase 1, platelet isoform TXS-II [... 
TBXAS1                0.991   thromboxane A synthase 1, platelet isoform TXS-I [H...
TBXAS1                0.991   thromboxane A synthase 1, platelet isoform TXS-I [H...
CYP3A4                0.248   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A7                0.243   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP3A5                0.243   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A43               0.237   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.236   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A43               0.233   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4V2                0.076   cytochrome P450, family 4, subfamily v, polypeptide...
CYP2C19               0.074   cytochrome P450, family 2, subfamily C, polypeptide 1...
CYP2J2                0.069   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP17A1               0.068   cytochrome P450, family 17 
CYP46A1               0.068   cytochrome P450, family 46 
CYP2U1                0.065   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2C8                0.064   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2C9                0.063   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP4F8                0.063   cytochrome P450, family 4, subfamily F, polypeptide 8...
CYP2C18               0.063   cytochrome P450 family 2 subfamily C polypeptide 18 ...
CYP4F3                0.062   cytochrome P450, family 4, subfamily F, polypeptide...
CYP1A2                0.062   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP2F1                0.059   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP4X1                0.059   cytochrome P450, family 4, subfamily X, polypeptide ...
CYP2E1                0.055   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP4F22               0.055   cytochrome P450, family 4, subfamily F, polypeptide...
CYP4F2                0.054   cytochrome P450, family 4, subfamily F, polypeptide ...
CYP4F12               0.054   cytochrome P450, family 4, subfamily F, polypeptide...
CYP1A1                0.052   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP4A11               0.052   cytochrome P450, family 4, subfamily A, polypeptide...
CYP4F11               0.052   cytochrome P450 family 4 subfamily F polypeptide 11...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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