Guide to the Human Genome
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Name: TOLLIP Sequence: fasta or formatted (274aa) NCBI GI: 21361619
Description:

toll interacting protein

Referenced in:

Lysosomes and Related Organelles
Toll-like Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         24           2
 C cysteine            1.5          4           1
 D aspartate           5.1         14           2
 E glutamate           4.7         13           2
 F phenylalanine       1.8          5           1
 G glycine             7.3         20           2
 H histidine           1.1          3           1
 I isoleucine          4.7         13           1
 K lysine              3.3          9           1
 L leucine             7.3         20           2
 M methionine          5.1         14           1
 N asparagine          3.6         10           1
 P proline             8.4         23           2
 Q glutamine           8.0         22           3
 R arginine            5.5         15           1
 S serine              4.0         11           1
 T threonine           5.5         15           2
 V valine              9.1         25           2
 W tryptophan          1.1          3           1
 Y tyrosine            4.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   toll interacting protein 
ITSN2                 0.028   intersectin 2 isoform 3 
ITSN2                 0.028   intersectin 2 isoform 1 
CUEDC1                0.026   CUE domain-containing 1 
MCTP2                 0.024   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.024   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.024   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
NEDD4L                0.019   neural precursor cell expressed, developmentally dow...
NEDD4L                0.019   neural precursor cell expressed, developmentally do...
NEDD4L                0.019   neural precursor cell expressed, developmentally do...
NEDD4L                0.019   neural precursor cell expressed, developmentally do...
ITCH                  0.019   itchy homolog E3 ubiquitin protein ligase 
RASA1                 0.017   RAS p21 protein activator 1 isoform 1 
RASA1                 0.017   RAS p21 protein activator 1 isoform 2 
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 1 [...
SYT9                  0.017   synaptotagmin IX 
MLL3                  0.015   myeloid/lymphoid or mixed-lineage leukemia 3 
NEDD4                 0.015   neural precursor cell expressed, developmentally do...
ESYT1                 0.015   extended synaptotagmin-like protein 1 
SFRS15                0.015   splicing factor, arginine/serine-rich 15 isoform 3 ...
DTX1                  0.013   deltex homolog 1 
MCTP1                 0.011   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.011   multiple C2 domains, transmembrane 1 isoform L [Hom...
LOC100294444          0.009   PREDICTED: similar to family with sequence similari...
FAM48B2               0.009   family with sequence similarity 48, member B2 [Homo...
ANXA11                0.008   annexin A11 
ANXA11                0.008   annexin A11 
ANXA11                0.008   annexin A11 
MAPK7                 0.008   mitogen-activated protein kinase 7 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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