Search of human proteins with 21361394

Search of human proteins with 21361394

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361394 adaptor-related protein complex 4, sigma 1 subunit
isoform 1 [Homo sapiens]
         (159 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361394 adaptor-related protein complex 4, sigma 1 subunit i...   326   6e-90
gi|189409104 adaptor-related protein complex 4, sigma 1 subunit ...   209   1e-54
gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [H...    95   3e-20
gi|70906430 adaptor-related protein complex 2, sigma 1 subunit i...    94   4e-20
gi|88703051 adaptor-related protein complex 1, sigma 3 subunit [...    92   1e-19
gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [H...    92   2e-19
gi|4502861 adaptor-related protein complex 3, sigma 1 subunit [H...    73   9e-14
gi|5031581 adaptor-related protein complex 3, sigma 2 subunit [H...    72   2e-13
gi|11038643 adaptor-related protein complex 2, sigma 1 subunit i...    42   2e-04
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo...    30   0.67 
gi|11863154 archain isoform 1 [Homo sapiens]                           30   0.67 
gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2 [...    30   1.1  
gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...    30   1.1  
gi|11342664 myxovirus resistance protein 2 [Homo sapiens]              30   1.1  
gi|68799814 adaptor-related protein complex 2, mu 1 subunit isof...    28   3.3  
gi|14917109 adaptor-related protein complex 2, mu 1 subunit isof...    28   3.3  
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [...    27   5.6  
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H...    27   5.6  
gi|117553586 dedicator of cytokinesis 5 [Homo sapiens]                 27   5.6  
gi|224831262 calcium channel, voltage-dependent, beta 4 subunit ...    27   9.6  
gi|54607068 calcium channel, voltage-dependent, beta 4 subunit i...    27   9.6  
gi|54607066 calcium channel, voltage-dependent, beta 4 subunit i...    27   9.6  
gi|54607064 calcium channel, voltage-dependent, beta 4 subunit i...    27   9.6  
gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo sap...    27   9.6  
gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo sap...    27   9.6  
gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo sap...    27   9.6  
gi|148833504 interleukin 16 isoform 2 [Homo sapiens]                   27   9.6  
gi|93204867 G protein-coupled receptor 158 [Homo sapiens]              27   9.6  

>gi|21361394 adaptor-related protein complex 4, sigma 1 subunit
           isoform 1 [Homo sapiens]
          Length = 159

 Score =  326 bits (835), Expect = 6e-90
 Identities = 159/159 (100%), Positives = 159/159 (100%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR
Sbjct: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSFFNTVFHSTWQMHSGP 120
           QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSFFNTVFHSTWQMHSGP
Sbjct: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSFFNTVFHSTWQMHSGP 120

Query: 121 YQEPIDELPKICSALEPQQTCFSPDSSSFKGAASTTPIY 159
           YQEPIDELPKICSALEPQQTCFSPDSSSFKGAASTTPIY
Sbjct: 121 YQEPIDELPKICSALEPQQTCFSPDSSSFKGAASTTPIY 159


>gi|189409104 adaptor-related protein complex 4, sigma 1 subunit
           isoform 2 [Homo sapiens]
          Length = 144

 Score =  209 bits (531), Expect = 1e-54
 Identities = 103/105 (98%), Positives = 104/105 (99%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR
Sbjct: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105
           QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELD+ F
Sbjct: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF 105


>gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [Homo
           sapiens]
          Length = 157

 Score = 94.7 bits (234), Expect = 3e-20
 Identities = 38/104 (36%), Positives = 71/104 (68%)

Query: 2   IKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYRQ 61
           ++F L+ ++QG+ RL K+Y  +   ++  +  E++++ L+R  + CSF+E++D K++Y++
Sbjct: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60

Query: 62  YAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105
           YA+L+    + D +NE+   E IH +VE+LD+YF  V ELD+ F
Sbjct: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIF 104


>gi|70906430 adaptor-related protein complex 2, sigma 1 subunit
           isoform AP17 [Homo sapiens]
          Length = 142

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 46/105 (43%), Positives = 70/105 (66%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           MI+F L+ N+ G+TRL+K+Y   D +++  L  EV      R  +  +F+E+++FK+IYR
Sbjct: 1   MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR 60

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105
           +YA L+  + V+  +N +A  E IHNFVEVL+EYF  V ELD+ F
Sbjct: 61  RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVF 105


>gi|88703051 adaptor-related protein complex 1, sigma 3 subunit
           [Homo sapiens]
          Length = 154

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 39/105 (37%), Positives = 69/105 (65%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           MI F L+ ++QG+ RL K+Y  +   +R  +  E+++  LSR +   SF+++K+ KL+Y+
Sbjct: 1   MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK 60

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105
           +YA+L+    + + +NE+   E +H +VE+LD+YF  V ELD+ F
Sbjct: 61  RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIF 105


>gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo
           sapiens]
          Length = 158

 Score = 92.0 bits (227), Expect = 2e-19
 Identities = 39/105 (37%), Positives = 69/105 (65%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           M++F L+ ++QG+ RL K+Y      +R  +  E+++  L+R  + CSF+E++D K++Y+
Sbjct: 1   MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK 60

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105
           +YA+L+    +   +NE+   E IH +VE+LD+YF  V ELD+ F
Sbjct: 61  RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIF 105


>gi|4502861 adaptor-related protein complex 3, sigma 1 subunit [Homo
           sapiens]
          Length = 193

 Score = 73.2 bits (178), Expect = 9e-14
 Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 6/118 (5%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEY------KD 54
           MIK  L+ N  G+ RLSK+Y+    + +  +  E       R    C+F+E        D
Sbjct: 1   MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD 60

Query: 55  FKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSFFNTVFHS 112
            KLIYR YA L+ V  V+ +E+E+ I + I  FVE LD+ F  V ELD+ F     H+
Sbjct: 61  NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHN 118


>gi|5031581 adaptor-related protein complex 3, sigma 2 subunit [Homo
           sapiens]
          Length = 193

 Score = 72.4 bits (176), Expect = 2e-13
 Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 6/117 (5%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEY------KD 54
           MI+  L+ N  G+ RL ++Y+      +  +  E     L R +  C+F+E        D
Sbjct: 1   MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD 60

Query: 55  FKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSFFNTVFH 111
           +KLIYR YA L+ V  V+ +E+E+ I + I  FVE LD+ F  V ELD+ F     H
Sbjct: 61  YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVH 117


>gi|11038643 adaptor-related protein complex 2, sigma 1 subunit
           isoform AP17delta [Homo sapiens]
          Length = 104

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 38/105 (36%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           MI+F L+ N+ G+TRL+K+Y   D +++  L  EV                         
Sbjct: 1   MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEV------------------------- 35

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSF 105
                  VV V D ++         NFVEVL+EYF  V ELD+ F
Sbjct: 36  -----HAVVTVRDAKHT--------NFVEVLNEYFHNVCELDLVF 67


>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
           sapiens]
          Length = 423

 Score = 30.4 bits (67), Expect = 0.67
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 58  IYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSE 100
           ++ +++ L++V   +   N   +Y F++  +EV  EYF  + E
Sbjct: 58  LWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEE 100


>gi|11863154 archain isoform 1 [Homo sapiens]
          Length = 511

 Score = 30.4 bits (67), Expect = 0.67
 Identities = 15/65 (23%), Positives = 32/65 (49%)

Query: 40  LSRSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVS 99
           L  + +Q +F+E +  + +Y+    L++V+      N +   E +  F  V+ EY   + 
Sbjct: 39  LMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALE 98

Query: 100 ELDVS 104
           E ++S
Sbjct: 99  ENEIS 103


>gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2
           [Homo sapiens]
          Length = 676

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 13/34 (38%), Positives = 24/34 (70%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKS 38
           F  V K  +TR+ ++++++  NK+T+ E EV+KS
Sbjct: 408 FRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKS 441


>gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Homo
           sapiens]
          Length = 694

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 13/34 (38%), Positives = 24/34 (70%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKS 38
           F  V K  +TR+ ++++++  NK+T+ E EV+KS
Sbjct: 426 FRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKS 459


>gi|11342664 myxovirus resistance protein 2 [Homo sapiens]
          Length = 715

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 42  RSNEQCSFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSEL 101
           R  E   F+ YK F++I  QY    +   ++  +  M I +    F+ V  ++F     L
Sbjct: 488 RGKELLGFVNYKTFEIIVHQYIQQLVEPALSMLQKAMEIIQ--QAFINVAKKHFGEFFNL 545

Query: 102 DVSFFNTV 109
           + +  +T+
Sbjct: 546 NQTVQSTI 553


>gi|68799814 adaptor-related protein complex 2, mu 1 subunit isoform
           b [Homo sapiens]
          Length = 433

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 2/103 (1%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           MI    + N +G+  +S+ Y   DI  R  ++   +    +R   +            + 
Sbjct: 1   MIGGLFIYNHKGEVLISRVYRD-DIG-RNAVDAFRVNVIHARQQVRSPVTNIARTSFFHV 58

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDV 103
           + + +++        N   ++EF++   +V+  YF ++SE ++
Sbjct: 59  KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENI 101


>gi|14917109 adaptor-related protein complex 2, mu 1 subunit isoform
           a [Homo sapiens]
          Length = 435

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 2/103 (1%)

Query: 1   MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR 60
           MI    + N +G+  +S+ Y   DI  R  ++   +    +R   +            + 
Sbjct: 1   MIGGLFIYNHKGEVLISRVYRD-DIG-RNAVDAFRVNVIHARQQVRSPVTNIARTSFFHV 58

Query: 61  QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDV 103
           + + +++        N   ++EF++   +V+  YF ++SE ++
Sbjct: 59  KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENI 101


>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
           [Homo sapiens]
          Length = 759

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 12/33 (36%), Positives = 23/33 (69%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIK 37
           F  V+K  + R+ K+++++  NK+T+ E EV+K
Sbjct: 492 FRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLK 524


>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
           sapiens]
          Length = 690

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 12/33 (36%), Positives = 23/33 (69%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIK 37
           F  V+K  + R+ K+++++  NK+T+ E EV+K
Sbjct: 423 FRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLK 455


>gi|117553586 dedicator of cytokinesis 5 [Homo sapiens]
          Length = 1870

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 48   SFIEYKDFKLIYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDVSFFN 107
            +FI +KD  +    YA  ++V+  N T+N + +   I+ F EVL  +F   +  ++  +N
Sbjct: 989  TFIMFKDL-IGKNVYAKDWMVM--NMTQNRVFL-RAINQFAEVLTRFFMDQASFELQLWN 1044

Query: 108  TVFH 111
              FH
Sbjct: 1045 NYFH 1048


>gi|224831262 calcium channel, voltage-dependent, beta 4 subunit
           isoform d [Homo sapiens]
          Length = 458

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYK-DFKLIYRQYA 63
           FL     G+  +++    + + KR++L     ++ + RSN + S  E + + + I+    
Sbjct: 245 FLKHRFDGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFELAR 304

Query: 64  ALFIVVGVNDTENEMA 79
           +L +VV   DT N  A
Sbjct: 305 SLQLVVLDADTINHPA 320


>gi|54607068 calcium channel, voltage-dependent, beta 4 subunit
           isoform a [Homo sapiens]
          Length = 486

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYK-DFKLIYRQYA 63
           FL     G+  +++    + + KR++L     ++ + RSN + S  E + + + I+    
Sbjct: 211 FLKHRFDGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFELAR 270

Query: 64  ALFIVVGVNDTENEMA 79
           +L +VV   DT N  A
Sbjct: 271 SLQLVVLDADTINHPA 286


>gi|54607066 calcium channel, voltage-dependent, beta 4 subunit
           isoform c [Homo sapiens]
          Length = 502

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYK-DFKLIYRQYA 63
           FL     G+  +++    + + KR++L     ++ + RSN + S  E + + + I+    
Sbjct: 227 FLKHRFDGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFELAR 286

Query: 64  ALFIVVGVNDTENEMA 79
           +L +VV   DT N  A
Sbjct: 287 SLQLVVLDADTINHPA 302


>gi|54607064 calcium channel, voltage-dependent, beta 4 subunit
           isoform b [Homo sapiens]
          Length = 520

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)

Query: 5   FLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYK-DFKLIYRQYA 63
           FL     G+  +++    + + KR++L     ++ + RSN + S  E + + + I+    
Sbjct: 245 FLKHRFDGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFELAR 304

Query: 64  ALFIVVGVNDTENEMA 79
           +L +VV   DT N  A
Sbjct: 305 SLQLVVLDADTINHPA 320


>gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo sapiens]
          Length = 1826

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 121  YQEPIDELPKICSALEPQQTCFSPDSSSFKGAASTTPI 158
            Y +P   LP      +PQ  CFSP S      A++ P+
Sbjct: 1593 YHQP--PLPFTLQGAQPQVLCFSPPSMPAPAPAASAPV 1628


>gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo sapiens]
          Length = 1826

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 121  YQEPIDELPKICSALEPQQTCFSPDSSSFKGAASTTPI 158
            Y +P   LP      +PQ  CFSP S      A++ P+
Sbjct: 1593 YHQP--PLPFTLQGAQPQVLCFSPPSMPAPAPAASAPV 1628


>gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo sapiens]
          Length = 1826

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 121  YQEPIDELPKICSALEPQQTCFSPDSSSFKGAASTTPI 158
            Y +P   LP      +PQ  CFSP S      A++ P+
Sbjct: 1593 YHQP--PLPFTLQGAQPQVLCFSPPSMPAPAPAASAPV 1628


>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
          Length = 1332

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 7/37 (18%)

Query: 129 PKICSALEP-------QQTCFSPDSSSFKGAASTTPI 158
           P +CS L P         TC + DSSSF   + + PI
Sbjct: 307 PSLCSHLSPPLCRSLSSSTCITKDSSSFALESPSAPI 343


>gi|93204867 G protein-coupled receptor 158 [Homo sapiens]
          Length = 1215

 Score = 26.6 bits (57), Expect = 9.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 100 ELDV----SFFNTVFHSTWQMHSGPYQEPIDELPKICSALE 136
           ELD+    S+ N+  +S W  HS   ++  DEL K+ + LE
Sbjct: 686 ELDMGRSGSYLNSSINSAWSEHSLDPEDIRDELKKLYAQLE 726


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,699,201
Number of Sequences: 37866
Number of extensions: 225282
Number of successful extensions: 607
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 589
Number of HSP's gapped (non-prelim): 29
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.