Search of human proteins with 21237783

Search of human proteins with 21237783

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21237783 component of oligomeric golgi complex 1 [Homo
sapiens]
         (980 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21237783 component of oligomeric golgi complex 1 [Homo sapiens]   1927   0.0  
gi|65507253 hypothetical protein LOC55196 [Homo sapiens]               35   0.26 
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa...    35   0.45 
gi|4826878 oxidative-stress responsive 1 [Homo sapiens]                33   1.7  
gi|167466164 glutathione S-transferase theta 1 [Homo sapiens]          32   2.2  
gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]           32   2.2  
gi|38348344 hypothetical protein LOC374355 [Homo sapiens]              32   3.8  
gi|32483361 apoptotic peptidase activating factor 1 isoform d [H...    31   5.0  
gi|32483359 apoptotic peptidase activating factor 1 isoform c [H...    31   5.0  
gi|4502123 apoptotic peptidase activating factor 1 isoform b [Ho...    31   5.0  
gi|7108333 apoptotic peptidase activating factor 1 isoform a [Ho...    31   5.0  
gi|149944526 additional sex combs like 3 [Homo sapiens]                31   5.0  
gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Hom...    31   6.5  
gi|156104874 envoplakin [Homo sapiens]                                 31   6.5  
gi|223972648 t-SNARE domain containing 1 [Homo sapiens]                31   6.5  
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo...    31   6.5  
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo...    31   6.5  
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         30   8.5  
gi|48255929 periphilin 1 isoform 1 [Homo sapiens]                      30   8.5  
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ...    30   8.5  

>gi|21237783 component of oligomeric golgi complex 1 [Homo sapiens]
          Length = 980

 Score = 1927 bits (4992), Expect = 0.0
 Identities = 980/980 (100%), Positives = 980/980 (100%)

Query: 1   MATAATSPALKRLDLRDPAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLI 60
           MATAATSPALKRLDLRDPAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLI
Sbjct: 1   MATAATSPALKRLDLRDPAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLI 60

Query: 61  EAADTIGQMRRCAVGLVDAVKATDQYCARLRQAGSAAPRPPRAQQPQQPSQEKFYSMAAQ 120
           EAADTIGQMRRCAVGLVDAVKATDQYCARLRQAGSAAPRPPRAQQPQQPSQEKFYSMAAQ
Sbjct: 61  EAADTIGQMRRCAVGLVDAVKATDQYCARLRQAGSAAPRPPRAQQPQQPSQEKFYSMAAQ 120

Query: 121 IKLLLEIPEKIWSSMEASQCLHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQV 180
           IKLLLEIPEKIWSSMEASQCLHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQV
Sbjct: 121 IKLLLEIPEKIWSSMEASQCLHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQV 180

Query: 181 AAASHFRSTILHESKMLLKCQGVSDQAVAEALCSIMLLEESSPRQALTDFLLARKATIQK 240
           AAASHFRSTILHESKMLLKCQGVSDQAVAEALCSIMLLEESSPRQALTDFLLARKATIQK
Sbjct: 181 AAASHFRSTILHESKMLLKCQGVSDQAVAEALCSIMLLEESSPRQALTDFLLARKATIQK 240

Query: 241 LLNQPHHGAGIKAQICSLVELLATTLKQAHALFYTLPEGLLPDPALPCGLLFSTLETITG 300
           LLNQPHHGAGIKAQICSLVELLATTLKQAHALFYTLPEGLLPDPALPCGLLFSTLETITG
Sbjct: 241 LLNQPHHGAGIKAQICSLVELLATTLKQAHALFYTLPEGLLPDPALPCGLLFSTLETITG 300

Query: 301 QHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPTLRTLAHPISQEYLKDTLQKWIHMCNE 360
           QHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPTLRTLAHPISQEYLKDTLQKWIHMCNE
Sbjct: 301 QHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPTLRTLAHPISQEYLKDTLQKWIHMCNE 360

Query: 361 DIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCRRLLEKPLLFWEDMMQQ 420
           DIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCRRLLEKPLLFWEDMMQQ
Sbjct: 361 DIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCRRLLEKPLLFWEDMMQQ 420

Query: 421 LFLDRLQTLTKEGFDSISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSLFLWSESP 480
           LFLDRLQTLTKEGFDSISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSLFLWSESP
Sbjct: 421 LFLDRLQTLTKEGFDSISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSLFLWSESP 480

Query: 481 NDLPSDAAWVSVANRGQFASSGLSMKAQAISPCVQNFCSALDSKLKVKLDDLLAYLPSDD 540
           NDLPSDAAWVSVANRGQFASSGLSMKAQAISPCVQNFCSALDSKLKVKLDDLLAYLPSDD
Sbjct: 481 NDLPSDAAWVSVANRGQFASSGLSMKAQAISPCVQNFCSALDSKLKVKLDDLLAYLPSDD 540

Query: 541 SSLPKDVSPTQAKSSAFDRYADAGTVQEMLRTQSVACIKHIVDCIRAELQSIEEGVQGQQ 600
           SSLPKDVSPTQAKSSAFDRYADAGTVQEMLRTQSVACIKHIVDCIRAELQSIEEGVQGQQ
Sbjct: 541 SSLPKDVSPTQAKSSAFDRYADAGTVQEMLRTQSVACIKHIVDCIRAELQSIEEGVQGQQ 600

Query: 601 DALNSAKLHSVLFMARLCQSLGELCPHLKQCILGKSESSEKPAREFRALRKQGKVKTQEI 660
           DALNSAKLHSVLFMARLCQSLGELCPHLKQCILGKSESSEKPAREFRALRKQGKVKTQEI
Sbjct: 601 DALNSAKLHSVLFMARLCQSLGELCPHLKQCILGKSESSEKPAREFRALRKQGKVKTQEI 660

Query: 661 IPTQAKWQEVKEVLLQQSVMGYQVWSSAVVKVLIHGFTQSLLLDDAGSVLATATSWDELE 720
           IPTQAKWQEVKEVLLQQSVMGYQVWSSAVVKVLIHGFTQSLLLDDAGSVLATATSWDELE
Sbjct: 661 IPTQAKWQEVKEVLLQQSVMGYQVWSSAVVKVLIHGFTQSLLLDDAGSVLATATSWDELE 720

Query: 721 IQEEAESGSSVTSKIRLPAQPSWYVQSFLFSLCQEINRVGGHALPKVTLQEMLKSCMVQV 780
           IQEEAESGSSVTSKIRLPAQPSWYVQSFLFSLCQEINRVGGHALPKVTLQEMLKSCMVQV
Sbjct: 721 IQEEAESGSSVTSKIRLPAQPSWYVQSFLFSLCQEINRVGGHALPKVTLQEMLKSCMVQV 780

Query: 781 VAAYEKLSEEKQIKKEGAFPVTQNRALQLLYDLRYLNIVLTAKGDEVKSGRSKPDSRIEK 840
           VAAYEKLSEEKQIKKEGAFPVTQNRALQLLYDLRYLNIVLTAKGDEVKSGRSKPDSRIEK
Sbjct: 781 VAAYEKLSEEKQIKKEGAFPVTQNRALQLLYDLRYLNIVLTAKGDEVKSGRSKPDSRIEK 840

Query: 841 VTDHLEALIDPFDLDVFTPHLNSNLHRLVQRTSVLFGLVTGTENQLAPRSSTFNSQEPHN 900
           VTDHLEALIDPFDLDVFTPHLNSNLHRLVQRTSVLFGLVTGTENQLAPRSSTFNSQEPHN
Sbjct: 841 VTDHLEALIDPFDLDVFTPHLNSNLHRLVQRTSVLFGLVTGTENQLAPRSSTFNSQEPHN 900

Query: 901 ILPLASSQIRFGLLPLSMTSTRKAKSTRNIETKAQVVPPARSTAGDPTVPGSLFRQLVSE 960
           ILPLASSQIRFGLLPLSMTSTRKAKSTRNIETKAQVVPPARSTAGDPTVPGSLFRQLVSE
Sbjct: 901 ILPLASSQIRFGLLPLSMTSTRKAKSTRNIETKAQVVPPARSTAGDPTVPGSLFRQLVSE 960

Query: 961 EDNTSAPSLFKLGWLSSMTK 980
           EDNTSAPSLFKLGWLSSMTK
Sbjct: 961 EDNTSAPSLFKLGWLSSMTK 980


>gi|65507253 hypothetical protein LOC55196 [Homo sapiens]
          Length = 1747

 Score = 35.4 bits (80), Expect = 0.26
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 720  EIQEEAESGSSVTSKIRLPAQPSWYVQSFLFSLCQEINRVGGHALPKVTLQEMLKSCMVQ 779
            E+Q+++   +  T    LP      V     S C ++N +  H   K+   E+      +
Sbjct: 1250 ELQDDSRKDTPKTKHKSLPRTEQELVAGQFSSKCDKLNPLQNHKRKKLRFHEVTFHSSNK 1309

Query: 780  VVAAYEKLSEEKQIKKEGAFPVTQN 804
            + A+YE+ S+E + KK     VTQN
Sbjct: 1310 MTASYEQASQETRQKKH----VTQN 1330


>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
            sapiens]
          Length = 2113

 Score = 34.7 bits (78), Expect = 0.45
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 907  SQIRFGLLPLSMTSTRKAKSTRN------IETKAQVVPPARSTAGDPTVPGSLFRQLVSE 960
            S IR G  P+S  + + A STRN        TK Q   PAR+   D    GS     V+E
Sbjct: 1780 SDIRPGTNPVSRKNVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTE 1839

Query: 961  EDNTSA 966
             D+ SA
Sbjct: 1840 SDSYSA 1845


>gi|4826878 oxidative-stress responsive 1 [Homo sapiens]
          Length = 527

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 70/310 (22%), Positives = 114/310 (36%), Gaps = 26/310 (8%)

Query: 595 GVQGQQDALNSAKLHSVLFMARLCQSLGELCPHLKQCILGKSESSEKPAREFRALRKQGK 654
           G+   + A  +A  H    M  L  +L    P L+  +  K E  +K  + FR +     
Sbjct: 214 GITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK-EMLKKYGKSFRKMISLCL 272

Query: 655 VKTQEIIPTQAK------WQEVK--EVLLQQSVMGYQVWSSAVVKVL-IHGFTQSLLLDD 705
            K  E  PT A+      +Q+ K  E L ++++      S    KV  + G +  L   +
Sbjct: 273 QKDPEKRPTAAELLRHKFFQKAKNKEFLQEKTLQRAPTISERAKKVRRVPGSSGRLHKTE 332

Query: 706 AGSVLATATSWDELEIQEEAESGSSVTSKIRLPAQPSWYVQSFLF-------SLCQEINR 758
            G        W + E  EE+E G +  S++R P        S LF       +L Q   +
Sbjct: 333 DGG-----WEWSDDEFDEESEEGKAAISQLRSPRVKESISNSELFPTTDPVGTLLQVPEQ 387

Query: 759 VGGHALPKVTLQEMLKSCMVQVVAAYEKLSEEKQIKKEGAFPVTQNRALQLLYDLRYLNI 818
           +  H LP+   Q   +   V +    E  ++  Q    G+        + L+  LR    
Sbjct: 388 ISAH-LPQPAGQIATQPTQVSLPPTAEP-AKTAQALSSGSGSQETKIPISLVLRLRNSKK 445

Query: 819 VLTAKGDEVKSGRSKPDSRIEKVTDHLEALIDPFDLDVFTPHLNSNLHRLVQRTSVLFGL 878
            L     E   GR   +   +++      L+D  DL +   +L   +       SV F L
Sbjct: 446 ELNDIRFEFTPGRDTAEGVSQELIS--AGLVDGRDLVIVAANLQKIVEEPQSNRSVTFKL 503

Query: 879 VTGTENQLAP 888
            +G E    P
Sbjct: 504 ASGVEGSDIP 513


>gi|167466164 glutathione S-transferase theta 1 [Homo sapiens]
          Length = 240

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 9/105 (8%)

Query: 260 ELLATTLKQAHALFYTLPEGLLPDPALPCG--LLFSTLETITG-QHPAGKGTGVLQEEMK 316
           + LA TL +       L +  L + A   G  +  + L  IT   HP G G  V +   K
Sbjct: 131 QTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVAITELMHPVGAGCQVFEGRPK 190

Query: 317 LCSWFKHLPASIVE--FQPT----LRTLAHPISQEYLKDTLQKWI 355
           L +W + + A++ E  FQ      L+    P +   +K  L  W+
Sbjct: 191 LATWRQRVEAAVGEDLFQEAHEVILKAKDFPPADPTIKQKLMPWV 235


>gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]
          Length = 903

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 488 AWVSVANRGQFASSGLSMKAQAISPCVQNFCSALDSKLKVKLDDLLAYLPS---DDSSLP 544
           +WVS   RG  +S   +++ QAI  C +     +   LK     L +  P+   +DS + 
Sbjct: 79  SWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIK 138

Query: 545 KDVSPTQAKSSAFDRYADAGTVQEMLRTQSVACIKHIVDCIRAELQSIEEGVQGQQDALN 604
            D    + +S+  D  AD    +   R     C+  + DC + E++ +    +G    LN
Sbjct: 139 SDKESVEQRSTVVDNDADFQGTKRACR-----CL-ILDDCEKREIKKVNVSEEG---PLN 189

Query: 605 SAKLHSV 611
           SA +  +
Sbjct: 190 SAVVEEI 196


>gi|38348344 hypothetical protein LOC374355 [Homo sapiens]
          Length = 258

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 16/48 (33%), Positives = 27/48 (56%)

Query: 21 LFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQ 68
          +F  H AEE R L R+VR+EI   +E++++   E   + I+    + Q
Sbjct: 11 IFTEHQAEESRRLMREVRSEITRCREKIKKATEELNEEKIKLESKVQQ 58


>gi|32483361 apoptotic peptidase activating factor 1 isoform d [Homo
           sapiens]
          Length = 1205

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 345 EYLKDTLQKWIHMCNEDIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCR 404
           E L + +   + M  EDIK+  T+L +  K +K    +   +W++ T E  +     + +
Sbjct: 362 EALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVED-----ILQ 416

Query: 405 RLLEKPLLFWE--DMMQQLFLDRLQT--LTKEGFDSISSSSKELLVSALQELESSTSNSP 460
             + K LLF +      + +L  LQ   LT++    +    K+ +++  Q      + SP
Sbjct: 417 EFVNKSLLFCDRNGKSFRYYLHDLQVDFLTEKNCSQLQDLHKK-IITQFQRYHQPHTLSP 475

Query: 461 SNKHIHFEYN 470
             +   + YN
Sbjct: 476 DQEDCMYWYN 485


>gi|32483359 apoptotic peptidase activating factor 1 isoform c [Homo
           sapiens]
          Length = 1248

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 345 EYLKDTLQKWIHMCNEDIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCR 404
           E L + +   + M  EDIK+  T+L +  K +K    +   +W++ T E  +     + +
Sbjct: 362 EALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVED-----ILQ 416

Query: 405 RLLEKPLLFWE--DMMQQLFLDRLQT--LTKEGFDSISSSSKELLVSALQELESSTSNSP 460
             + K LLF +      + +L  LQ   LT++    +    K+ +++  Q      + SP
Sbjct: 417 EFVNKSLLFCDRNGKSFRYYLHDLQVDFLTEKNCSQLQDLHKK-IITQFQRYHQPHTLSP 475

Query: 461 SNKHIHFEYN 470
             +   + YN
Sbjct: 476 DQEDCMYWYN 485


>gi|4502123 apoptotic peptidase activating factor 1 isoform b [Homo
           sapiens]
          Length = 1194

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 345 EYLKDTLQKWIHMCNEDIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCR 404
           E L + +   + M  EDIK+  T+L +  K +K    +   +W++ T E  +     + +
Sbjct: 351 EALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVED-----ILQ 405

Query: 405 RLLEKPLLFWE--DMMQQLFLDRLQT--LTKEGFDSISSSSKELLVSALQELESSTSNSP 460
             + K LLF +      + +L  LQ   LT++    +    K+ +++  Q      + SP
Sbjct: 406 EFVNKSLLFCDRNGKSFRYYLHDLQVDFLTEKNCSQLQDLHKK-IITQFQRYHQPHTLSP 464

Query: 461 SNKHIHFEYN 470
             +   + YN
Sbjct: 465 DQEDCMYWYN 474


>gi|7108333 apoptotic peptidase activating factor 1 isoform a [Homo
           sapiens]
          Length = 1237

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 345 EYLKDTLQKWIHMCNEDIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCR 404
           E L + +   + M  EDIK+  T+L +  K +K    +   +W++ T E  +     + +
Sbjct: 351 EALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVED-----ILQ 405

Query: 405 RLLEKPLLFWE--DMMQQLFLDRLQT--LTKEGFDSISSSSKELLVSALQELESSTSNSP 460
             + K LLF +      + +L  LQ   LT++    +    K+ +++  Q      + SP
Sbjct: 406 EFVNKSLLFCDRNGKSFRYYLHDLQVDFLTEKNCSQLQDLHKK-IITQFQRYHQPHTLSP 464

Query: 461 SNKHIHFEYN 470
             +   + YN
Sbjct: 465 DQEDCMYWYN 474


>gi|149944526 additional sex combs like 3 [Homo sapiens]
          Length = 2248

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 55/252 (21%), Positives = 94/252 (37%), Gaps = 37/252 (14%)

Query: 443 ELLVSALQELESSTSNSP-SNKHIHFEYNMSLFLWSESPNDLPSDAAWVSVANRGQFASS 501
           E+ +   QE+E      P   K     Y   L +  E    L +        +     +S
Sbjct: 331 EMQLRIRQEIEKEKKTEPWKEKFFERFYGEKLGMSREESVKLTTGPNNAGAQSSSSCGTS 390

Query: 502 GLSMKAQAI----------SPCVQN--FCSALDSKLKVKLDDLLAYLPSDDSSLPKDVSP 549
           GL + AQ            SP      FC+ L   +++   D++A L S+D  +P++ S 
Sbjct: 391 GLPVSAQTALAEQQPKSMKSPASPEPGFCATLCPMVEIPPKDIMAELESEDILIPEE-SV 449

Query: 550 TQAKSSAFDRYADAGTVQEMLRTQSVACIKH---IVDCIRAELQSIEEGVQGQQDALNSA 606
            Q +            + E + T    C       +     E +S+    +  Q A    
Sbjct: 450 IQEE------------IAEEVETSICECQDENHKTIPEFSEEAESLTNSHEEPQIAPPED 497

Query: 607 KLHSVLFMARLCQSLGELCPHLKQCILGKSESSEKPAREFRALRKQGKVKTQEIIPTQAK 666
            L S + M  + ++L    PH++  I GKSES   P  E   +  Q +V    +IP+ + 
Sbjct: 498 NLESCVMMNDVLETL----PHIEVKIEGKSES---PQEEMTVVIDQLEV-CDSLIPSTSS 549

Query: 667 WQEVKEVLLQQS 678
              V +   ++S
Sbjct: 550 MTHVSDTEHKES 561


>gi|4504217 guanylate cyclase 2D, membrane (retina-specific) [Homo
           sapiens]
          Length = 1103

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 19/133 (14%)

Query: 18  PAALFE----------THGAEEIRGLERQVRAEIEHKKEELRQMV-GERYRDLIEAADTI 66
           PAAL+E          T G+ +    +R+++ +   K   L  ++ G RY      A   
Sbjct: 607 PAALWEGNLAVVSEHCTRGSLQDLLAQREIKLDWMFKSSLLLDLIKGIRYLHHRGVAHGR 666

Query: 67  GQMRRCAVGLVDAVKATDQYCARLRQAGSAAPRPPRAQQP--------QQPSQEKFYSMA 118
            + R C V     +K TD    RL +A    P PPRA+          + P+ E+  ++A
Sbjct: 667 LKSRNCIVDGRFVLKITDHGHGRLLEAQKVLPEPPRAEDQLWTAPELLRDPALERRGTLA 726

Query: 119 AQIKLLLEIPEKI 131
             +  L  I +++
Sbjct: 727 GDVFSLAIIMQEV 739


>gi|156104874 envoplakin [Homo sapiens]
          Length = 2033

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)

Query: 42   EHKKEELRQMVGERYRDLIEAADTIGQM-RRCAVGLVDAVKATDQYCARLRQAGSAAPRP 100
            E    + R+    R R+ I+ A+T+G+   R    L  A    DQ C RL+Q   A  R 
Sbjct: 1546 ERTARQAREEEARRLRERIDRAETLGRTWSREESELQRARDQADQECGRLQQELRALERQ 1605

Query: 101  PRAQQPQQPSQEKFYSMAAQ 120
             + Q  Q   + K  S   +
Sbjct: 1606 KQQQTLQLQEESKLLSQKTE 1625


>gi|223972648 t-SNARE domain containing 1 [Homo sapiens]
          Length = 513

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 32  GLERQVRAEIEHKKEELRQMVGERYRDLIEAA----DTIGQMRRCAVGLVDAVKATDQYC 87
           G  R+   +++HK  +LR +V  +  DL +AA       G+ +  A+  V+ V A    C
Sbjct: 175 GYCRRDVVDLKHKWRDLRAVVRRKLGDLRKAAHGPSPGSGKPQALALTPVEQVVAKTFSC 234

Query: 88  ARLRQAGSAAPRPPRAQQPQQPS-QEKFYSMAAQI 121
             L   G +   PPRA Q    + QE F  M+A +
Sbjct: 235 QALPSEGFSL-EPPRATQVDPCNLQELFQEMSANV 268


>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
           sapiens]
          Length = 1077

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 9/62 (14%)

Query: 635 KSESSEKPAR---EFRALRKQGKVKTQEIIPTQAKWQEVKEVLLQQSVMGYQVWSSAVVK 691
           K   SEK A    E +A R++       I+P +A+ ++ K++LL++ V  +  W   + K
Sbjct: 613 KDIDSEKEAAMEAEIKAARERA------IVPLEARMKQFKDMLLERGVSAFSTWEKELHK 666

Query: 692 VL 693
           ++
Sbjct: 667 IV 668


>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
           sapiens]
          Length = 1098

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 9/62 (14%)

Query: 635 KSESSEKPAR---EFRALRKQGKVKTQEIIPTQAKWQEVKEVLLQQSVMGYQVWSSAVVK 691
           K   SEK A    E +A R++       I+P +A+ ++ K++LL++ V  +  W   + K
Sbjct: 634 KDIDSEKEAAMEAEIKAARERA------IVPLEARMKQFKDMLLERGVSAFSTWEKELHK 687

Query: 692 VL 693
           ++
Sbjct: 688 IV 689


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 9/110 (8%)

Query: 5    ATSPALKRLDLRDPAALFET--HGAEEIRGLERQVRAEIEHKKE---ELRQMVGERYRDL 59
            A SP  K + L  P+ + E    G EE    ER+V+AE+E   E   EL  +        
Sbjct: 1125 ALSPEDKPIRL-SPSKITEPLREGPEEEPLAEREVKAEVEDMDEGPTELPPLESPLPLPA 1183

Query: 60   IEAADTIGQMRRCAVGLVD--AVKATDQYCARLRQAGSAAPRP-PRAQQP 106
             EA  T      C  GL++  A+ AT Q CA   +       P PR   P
Sbjct: 1184 AEAMATPSPAGGCGGGLLEAQALSATGQSCAEPSECPDFVEGPEPRVDSP 1233


>gi|48255929 periphilin 1 isoform 1 [Homo sapiens]
          Length = 458

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)

Query: 92  QAGSAAPRPPRAQQPQQPSQEKFYSMAAQIKLLLEIPEKIW-----SSMEASQCLHATQ 145
           +   +AP+PP+A QP QP ++K      Q++     P+  W     ++ EA + L  TQ
Sbjct: 371 ETAQSAPQPPQAPQPLQP-RKKRVRRTTQLRRTTGAPDITWGMLKKTTQEAERILLRTQ 428


>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
            transmembrane signal), 1 [Homo sapiens]
          Length = 3259

 Score = 30.4 bits (67), Expect = 8.5
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 398  SWDVLCRRLLEKPLLFWEDMMQQLFLDRLQTLTKEGFDSISSSSKELLVSALQELESSTS 457
            SW++  RR+ E+ L+   D  QQ  L  LQ L +E   S SS ++ L V   ++    TS
Sbjct: 2958 SWEIHERRMKEQYLMAISDKDQQ--LSHLQNLIRE-LRSSSSQTQPLKVQYQRQASPETS 3014

Query: 458  NSP 460
             SP
Sbjct: 3015 ASP 3017


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.130    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,715,415
Number of Sequences: 37866
Number of extensions: 1550086
Number of successful extensions: 5672
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 5657
Number of HSP's gapped (non-prelim): 32
length of query: 980
length of database: 18,247,518
effective HSP length: 112
effective length of query: 868
effective length of database: 14,006,526
effective search space: 12157664568
effective search space used: 12157664568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.