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Search of human proteins with 210147407
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|210147407 sphingomyelin synthase 2 [Homo sapiens]
(365 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|210147409 sphingomyelin synthase 2 [Homo sapiens] 774 0.0
gi|210147407 sphingomyelin synthase 2 [Homo sapiens] 774 0.0
gi|22749271 sphingomyelin synthase 2 [Homo sapiens] 774 0.0
gi|29789379 sphingomyelin synthase 1 [Homo sapiens] 461 e-130
gi|21389545 sterile alpha motif domain containing 8 [Homo sapiens] 162 6e-40
gi|219842266 usherin isoform B [Homo sapiens] 32 0.69
gi|219842259 usherin isoform A [Homo sapiens] 32 0.69
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 32 0.69
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 32 0.69
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 31 2.0
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 31 2.0
gi|52630445 monocyte to macrophage differentiation-associated pr... 30 3.4
gi|16418457 solute carrier family 26, member 8 isoform a [Homo s... 30 4.4
gi|20336285 solute carrier family 26, member 8 isoform b [Homo s... 30 4.4
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 30 4.4
gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform ... 29 5.8
gi|8923754 serine/threonine kinase 32B [Homo sapiens] 29 7.6
gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens] 28 9.9
>gi|210147409 sphingomyelin synthase 2 [Homo sapiens]
Length = 365
Score = 774 bits (1999), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI
Sbjct: 1 MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
Query: 61 QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY
Sbjct: 61 QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
Query: 361 NEKST 365
NEKST
Sbjct: 361 NEKST 365
>gi|210147407 sphingomyelin synthase 2 [Homo sapiens]
Length = 365
Score = 774 bits (1999), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI
Sbjct: 1 MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
Query: 61 QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY
Sbjct: 61 QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
Query: 361 NEKST 365
NEKST
Sbjct: 361 NEKST 365
>gi|22749271 sphingomyelin synthase 2 [Homo sapiens]
Length = 365
Score = 774 bits (1999), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI
Sbjct: 1 MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
Query: 61 QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY
Sbjct: 61 QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
Query: 361 NEKST 365
NEKST
Sbjct: 361 NEKST 365
>gi|29789379 sphingomyelin synthase 1 [Homo sapiens]
Length = 413
Score = 461 bits (1185), Expect = e-130
Identities = 215/354 (60%), Positives = 272/354 (76%), Gaps = 5/354 (1%)
Query: 1 MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
+D+IET K+E HLE + N + V+ +G+ K +G+ G +K + I
Sbjct: 61 LDMIETLKMEHHLEAHKNGHANGHLNIG--VDIPTPDGSFSIKIKPNGMPNGYRK--EMI 116
Query: 61 QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
+I MP R+++P+EW KT +AF+YA+ VLTTVMI+VVHERVPPKE+ PPLPD FFD+
Sbjct: 117 KIPMPELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDH 176
Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
+RV+WAFS+ EING+ILVGLW+ QWL L+YKSI+ RRF I+GTLYLYRCITMYVTTLP
Sbjct: 177 FNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLP 236
Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
VPGMHF C+PKL GD +A+++RI++LI+GGGLSITGSH +CGD+L+SGHTV LTLTYLFI
Sbjct: 237 VPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFI 296
Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
KEYSPR WWYH ICWLLS GI CIL+AH+HYT+DV++AYYITTRLFWWYH+MAN++ L
Sbjct: 297 KEYSPRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVL 356
Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRV 354
K +SQ N L+R WW+ F +FEKNVQG +P + WP WP S KYSR+
Sbjct: 357 KEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPV-VHLSRQVKYSRL 409
>gi|21389545 sterile alpha motif domain containing 8 [Homo sapiens]
Length = 326
Score = 162 bits (409), Expect = 6e-40
Identities = 74/168 (44%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 75 EWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDYIDRVKWAFSVSEIN 134
E+WKT ++ IY T+ ++ +VHERVP + PPLPD F D + R+ WAF+++E+
Sbjct: 148 EYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMTEVC 207
Query: 135 GIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLPVPGMHFQCAPKLNG 194
G+IL +W+ L +++SI+ RR C ++GT++L RC TM+VT+L VPG H QC K+ G
Sbjct: 208 GMILCYIWLLVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKIYG 267
Query: 195 DSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFIKE 242
K+ R + SG G+++TG H CGD++FSGHTV LT+ F+ E
Sbjct: 268 SVWEKLHRAFAIWSGFGMTLTGVH-TCGDYMFSGHTVVLTMLNFFVTE 314
>gi|219842266 usherin isoform B [Homo sapiens]
Length = 5202
Score = 32.3 bits (72), Expect = 0.69
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 92 LTTVMITVVHERVPPKELSPPLPDKFFDYIDRVKWAFSVSEINGIIL 138
L ++ ITV + PP+ LSPP K V+W+ +E+NGII+
Sbjct: 1229 LHSLPITVTTAQAPPQRLSPPKMQKISSTELHVEWS-PPAELNGIII 1274
>gi|219842259 usherin isoform A [Homo sapiens]
Length = 1546
Score = 32.3 bits (72), Expect = 0.69
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 92 LTTVMITVVHERVPPKELSPPLPDKFFDYIDRVKWAFSVSEINGIIL 138
L ++ ITV + PP+ LSPP K V+W+ +E+NGII+
Sbjct: 1229 LHSLPITVTTAQAPPQRLSPPKMQKISSTELHVEWS-PPAELNGIII 1274
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 32.3 bits (72), Expect = 0.69
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 10 EEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESR 69
EE E + + E EE+ ++GN +S SSG RK KK+ P+ R
Sbjct: 300 EEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVKPSRKR 359
Query: 70 NK 71
K
Sbjct: 360 RK 361
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 32.3 bits (72), Expect = 0.69
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 10 EEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESR 69
EE E + + E EE+ ++GN +S SSG RK KK+ P+ R
Sbjct: 300 EEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVKPSRKR 359
Query: 70 NK 71
K
Sbjct: 360 RK 361
>gi|238624188 diffuse panbronchiolitis critical region 1 protein
[Homo sapiens]
Length = 1393
Score = 30.8 bits (68), Expect = 2.0
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSL---SSGLRKGTKKYPDYIQI 62
+A+ EH E P NT PAEP E + N K + R+ T
Sbjct: 697 SAEPTEHGERTPLANENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSP 756
Query: 63 AMPTESRNKFPLEWWKT 79
A PTE+ ++ PL KT
Sbjct: 757 AQPTENGDRTPLANEKT 773
Score = 30.8 bits (68), Expect = 2.0
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 16/64 (25%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMP 65
+A+ EH E P NT + PAEP E + N K T ++P A P
Sbjct: 798 SAEPTEHAERTPLANENTTSSPAEPTENRERTANEK-----------TTQFP-----AEP 841
Query: 66 TESR 69
TE+R
Sbjct: 842 TENR 845
Score = 30.0 bits (66), Expect = 3.4
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGK-----PKSLSSGLRKGTKKYPDYI 60
+A+ EH E P NT PAEP E + N K + +G R
Sbjct: 516 SAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTP 575
Query: 61 QIAMPTESRNKFPLEWWKT 79
+A PTE+ + P KT
Sbjct: 576 SLAEPTENGQRTPFANEKT 594
Score = 29.6 bits (65), Expect = 4.4
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
+A+ EH E P NT PAEP E + N +G R+ T +
Sbjct: 598 SAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFP 657
Query: 63 AMPTESRNK 71
A PTE+R +
Sbjct: 658 AEPTENRER 666
Score = 28.9 bits (63), Expect = 7.6
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
+A+ EH E P NT PAEP E + N +G R+ T +
Sbjct: 417 SAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSP 476
Query: 63 AMPTESR 69
PTE+R
Sbjct: 477 VEPTENR 483
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 30.8 bits (68), Expect = 2.0
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 16/64 (25%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMP 65
+A+ EH E P NT + PAEP E + N K T ++P A P
Sbjct: 860 SAEPTEHAERTPLANENTTSSPAEPTENRERTANEK-----------TTQFP-----AEP 903
Query: 66 TESR 69
TE+R
Sbjct: 904 TENR 907
Score = 30.0 bits (66), Expect = 3.4
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGK-----PKSLSSGLRKGTKKYPDYI 60
+A+ EH E P NT PAEP E + N K + +G R
Sbjct: 578 SAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTP 637
Query: 61 QIAMPTESRNKFPLEWWKT 79
+A PTE+ + P KT
Sbjct: 638 SLAEPTENGQRTPFANEKT 656
Score = 29.6 bits (65), Expect = 4.4
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
+A+ EH E P NT PAEP E + N +G R+ T +
Sbjct: 660 SAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFP 719
Query: 63 AMPTESRNK 71
A PTE+R +
Sbjct: 720 AEPTENRER 728
Score = 28.9 bits (63), Expect = 7.6
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 6 TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
+A+ EH E P NT PAEP E + N +G R+ T +
Sbjct: 479 SAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSP 538
Query: 63 AMPTESR 69
PTE+R
Sbjct: 539 VEPTENR 545
>gi|52630445 monocyte to macrophage differentiation-associated
precursor [Homo sapiens]
Length = 238
Score = 30.0 bits (66), Expect = 3.4
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 237 YLFIKEYSP--RHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYIT 284
+L ++E P H W+ WL++A G I + + HE Y + V + +Y+T
Sbjct: 115 WLNLRELGPLASHMRWF---IWLMAAGGTIYVFLYHEKYKV-VELFFYLT 160
>gi|16418457 solute carrier family 26, member 8 isoform a [Homo
sapiens]
Length = 970
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 19 DPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESRNKFPLE 75
D + T R E E +KN N + K SS L P +I+I P E ++ LE
Sbjct: 809 DESETVIR--ETYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLE 863
>gi|20336285 solute carrier family 26, member 8 isoform b [Homo
sapiens]
Length = 865
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 19 DPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESRNKFPLE 75
D + T R E E +KN N + K SS L P +I+I P E ++ LE
Sbjct: 704 DESETVIR--ETYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLE 758
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 29.6 bits (65), Expect = 4.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 5 ETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAM 64
E A +E L N PS + + P + +E G+GKP+S L+ +K P +
Sbjct: 406 EDASHQEALGNLPSP--SEHKLPECHLVKEEYEGSGKPESEPKELKTAGEKEPQLSEACG 463
Query: 65 PTE 67
PTE
Sbjct: 464 PTE 466
>gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform 2
[Homo sapiens]
Length = 2044
Score = 29.3 bits (64), Expect = 5.8
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 89 NLVLTTVMITVVHERVPP-KELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQW 146
NL + +I V+ R+PP KE P L F D+ W +SV + GLW +W
Sbjct: 708 NLGVLIPVIAVLTRRLPPIKEAKPRLQKLFRDF-----WLYSVLMGFAVEGSGLWPEEW 761
>gi|8923754 serine/threonine kinase 32B [Homo sapiens]
Length = 414
Score = 28.9 bits (63), Expect = 7.6
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 52 GTKKY--PDYIQIAMPTESRNKFPLEWWKTGI 81
GTK Y P+ Q+ M +P++WW GI
Sbjct: 182 GTKPYMAPEVFQVYMDRGPGYSYPVDWWSLGI 213
>gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens]
Length = 301
Score = 28.5 bits (62), Expect = 9.9
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 15/61 (24%)
Query: 240 IKEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKN 299
+KE +P+H + L+CW I+C+LV ++I Y+T + W Y ++ ++
Sbjct: 119 LKEKAPKHVGFSVLLCW------IVCMLV-------NIIFPMYVTGK--WNYTNITVNED 163
Query: 300 L 300
L
Sbjct: 164 L 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,815,717
Number of Sequences: 37866
Number of extensions: 656341
Number of successful extensions: 2149
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2100
Number of HSP's gapped (non-prelim): 39
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.