Guide to the Human Genome
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Search of human proteins with 210147407

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|210147407 sphingomyelin synthase 2 [Homo sapiens]
         (365 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|210147409 sphingomyelin synthase 2 [Homo sapiens]                  774   0.0  
gi|210147407 sphingomyelin synthase 2 [Homo sapiens]                  774   0.0  
gi|22749271 sphingomyelin synthase 2 [Homo sapiens]                   774   0.0  
gi|29789379 sphingomyelin synthase 1 [Homo sapiens]                   461   e-130
gi|21389545 sterile alpha motif domain containing 8 [Homo sapiens]    162   6e-40
gi|219842266 usherin isoform B [Homo sapiens]                          32   0.69 
gi|219842259 usherin isoform A [Homo sapiens]                          32   0.69 
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is...    32   0.69 
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is...    32   0.69 
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    31   2.0  
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit...    31   2.0  
gi|52630445 monocyte to macrophage differentiation-associated pr...    30   3.4  
gi|16418457 solute carrier family 26, member 8 isoform a [Homo s...    30   4.4  
gi|20336285 solute carrier family 26, member 8 isoform b [Homo s...    30   4.4  
gi|50843837 hypothetical protein LOC55701 [Homo sapiens]               30   4.4  
gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform ...    29   5.8  
gi|8923754 serine/threonine kinase 32B [Homo sapiens]                  29   7.6  
gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens]                    28   9.9  

>gi|210147409 sphingomyelin synthase 2 [Homo sapiens]
          Length = 365

 Score =  774 bits (1999), Expect = 0.0
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
           MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI
Sbjct: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60

Query: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
           QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY
Sbjct: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120

Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
           IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180

Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
           VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240

Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
           KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300

Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
           KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360

Query: 361 NEKST 365
           NEKST
Sbjct: 361 NEKST 365


>gi|210147407 sphingomyelin synthase 2 [Homo sapiens]
          Length = 365

 Score =  774 bits (1999), Expect = 0.0
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
           MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI
Sbjct: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60

Query: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
           QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY
Sbjct: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120

Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
           IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180

Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
           VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240

Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
           KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300

Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
           KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360

Query: 361 NEKST 365
           NEKST
Sbjct: 361 NEKST 365


>gi|22749271 sphingomyelin synthase 2 [Homo sapiens]
          Length = 365

 Score =  774 bits (1999), Expect = 0.0
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
           MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI
Sbjct: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60

Query: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
           QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY
Sbjct: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120

Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
           IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP
Sbjct: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180

Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
           VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI
Sbjct: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240

Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
           KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL
Sbjct: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300

Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360
           KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED
Sbjct: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRVQKIGED 360

Query: 361 NEKST 365
           NEKST
Sbjct: 361 NEKST 365


>gi|29789379 sphingomyelin synthase 1 [Homo sapiens]
          Length = 413

 Score =  461 bits (1185), Expect = e-130
 Identities = 215/354 (60%), Positives = 272/354 (76%), Gaps = 5/354 (1%)

Query: 1   MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI 60
           +D+IET K+E HLE   +   N +      V+    +G+   K   +G+  G +K  + I
Sbjct: 61  LDMIETLKMEHHLEAHKNGHANGHLNIG--VDIPTPDGSFSIKIKPNGMPNGYRK--EMI 116

Query: 61  QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY 120
           +I MP   R+++P+EW KT +AF+YA+   VLTTVMI+VVHERVPPKE+ PPLPD FFD+
Sbjct: 117 KIPMPELERSQYPMEWGKTFLAFLYALSCFVLTTVMISVVHERVPPKEVQPPLPDTFFDH 176

Query: 121 IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP 180
            +RV+WAFS+ EING+ILVGLW+ QWL L+YKSI+ RRF  I+GTLYLYRCITMYVTTLP
Sbjct: 177 FNRVQWAFSICEINGMILVGLWLIQWLLLKYKSIISRRFFCIVGTLYLYRCITMYVTTLP 236

Query: 181 VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI 240
           VPGMHF C+PKL GD +A+++RI++LI+GGGLSITGSH +CGD+L+SGHTV LTLTYLFI
Sbjct: 237 VPGMHFNCSPKLFGDWEAQLRRIMKLIAGGGLSITGSHNMCGDYLYSGHTVMLTLTYLFI 296

Query: 241 KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKNL 300
           KEYSPR  WWYH ICWLLS  GI CIL+AH+HYT+DV++AYYITTRLFWWYH+MAN++ L
Sbjct: 297 KEYSPRRLWWYHWICWLLSVVGIFCILLAHDHYTVDVVVAYYITTRLFWWYHTMANQQVL 356

Query: 301 KVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFSWPLSWPPGCFKSSCKKYSRV 354
           K +SQ N L+R WW+  F +FEKNVQG +P  + WP  WP     S   KYSR+
Sbjct: 357 KEASQMNLLARVWWYRPFQYFEKNVQGIVPRSYHWPFPWPV-VHLSRQVKYSRL 409


>gi|21389545 sterile alpha motif domain containing 8 [Homo sapiens]
          Length = 326

 Score =  162 bits (409), Expect = 6e-40
 Identities = 74/168 (44%), Positives = 111/168 (66%), Gaps = 1/168 (0%)

Query: 75  EWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDYIDRVKWAFSVSEIN 134
           E+WKT ++ IY       T+ ++ +VHERVP  +  PPLPD F D + R+ WAF+++E+ 
Sbjct: 148 EYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMTEVC 207

Query: 135 GIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLPVPGMHFQCAPKLNG 194
           G+IL  +W+   L  +++SI+ RR C ++GT++L RC TM+VT+L VPG H QC  K+ G
Sbjct: 208 GMILCYIWLLVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKIYG 267

Query: 195 DSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFIKE 242
               K+ R   + SG G+++TG H  CGD++FSGHTV LT+   F+ E
Sbjct: 268 SVWEKLHRAFAIWSGFGMTLTGVH-TCGDYMFSGHTVVLTMLNFFVTE 314


>gi|219842266 usherin isoform B [Homo sapiens]
          Length = 5202

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 92   LTTVMITVVHERVPPKELSPPLPDKFFDYIDRVKWAFSVSEINGIIL 138
            L ++ ITV   + PP+ LSPP   K       V+W+   +E+NGII+
Sbjct: 1229 LHSLPITVTTAQAPPQRLSPPKMQKISSTELHVEWS-PPAELNGIII 1274


>gi|219842259 usherin isoform A [Homo sapiens]
          Length = 1546

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 92   LTTVMITVVHERVPPKELSPPLPDKFFDYIDRVKWAFSVSEINGIIL 138
            L ++ ITV   + PP+ LSPP   K       V+W+   +E+NGII+
Sbjct: 1229 LHSLPITVTTAQAPPQRLSPPKMQKISSTELHVEWS-PPAELNGIII 1274


>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
           isoform b [Homo sapiens]
          Length = 1176

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 19/62 (30%), Positives = 27/62 (43%)

Query: 10  EEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESR 69
           EE  E +  +         E  EE+ ++GN   +S SSG RK  KK+        P+  R
Sbjct: 300 EEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVKPSRKR 359

Query: 70  NK 71
            K
Sbjct: 360 RK 361


>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
           isoform a [Homo sapiens]
          Length = 1210

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 19/62 (30%), Positives = 27/62 (43%)

Query: 10  EEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESR 69
           EE  E +  +         E  EE+ ++GN   +S SSG RK  KK+        P+  R
Sbjct: 300 EEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSSGRRKAKKKWRKDSPWVKPSRKR 359

Query: 70  NK 71
            K
Sbjct: 360 RK 361


>gi|238624188 diffuse panbronchiolitis critical region 1 protein
           [Homo sapiens]
          Length = 1393

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSL---SSGLRKGTKKYPDYIQI 62
           +A+  EH E  P    NT   PAEP E   +  N K        +  R+ T         
Sbjct: 697 SAEPTEHGERTPLANENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSP 756

Query: 63  AMPTESRNKFPLEWWKT 79
           A PTE+ ++ PL   KT
Sbjct: 757 AQPTENGDRTPLANEKT 773



 Score = 30.8 bits (68), Expect = 2.0
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 16/64 (25%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMP 65
           +A+  EH E  P    NT + PAEP E   +  N K           T ++P     A P
Sbjct: 798 SAEPTEHAERTPLANENTTSSPAEPTENRERTANEK-----------TTQFP-----AEP 841

Query: 66  TESR 69
           TE+R
Sbjct: 842 TENR 845



 Score = 30.0 bits (66), Expect = 3.4
 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGK-----PKSLSSGLRKGTKKYPDYI 60
           +A+  EH E  P    NT   PAEP E   +  N K      +   +G R          
Sbjct: 516 SAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTP 575

Query: 61  QIAMPTESRNKFPLEWWKT 79
            +A PTE+  + P    KT
Sbjct: 576 SLAEPTENGQRTPFANEKT 594



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
           +A+  EH E  P    NT   PAEP E   +  N       +G    R+ T      +  
Sbjct: 598 SAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFP 657

Query: 63  AMPTESRNK 71
           A PTE+R +
Sbjct: 658 AEPTENRER 666



 Score = 28.9 bits (63), Expect = 7.6
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
           +A+  EH E  P    NT   PAEP E   +  N       +G    R+ T      +  
Sbjct: 417 SAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSP 476

Query: 63  AMPTESR 69
             PTE+R
Sbjct: 477 VEPTENR 483


>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
           critical region 1 [Homo sapiens]
          Length = 1400

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 16/64 (25%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMP 65
           +A+  EH E  P    NT + PAEP E   +  N K           T ++P     A P
Sbjct: 860 SAEPTEHAERTPLANENTTSSPAEPTENRERTANEK-----------TTQFP-----AEP 903

Query: 66  TESR 69
           TE+R
Sbjct: 904 TENR 907



 Score = 30.0 bits (66), Expect = 3.4
 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGK-----PKSLSSGLRKGTKKYPDYI 60
           +A+  EH E  P    NT   PAEP E   +  N K      +   +G R          
Sbjct: 578 SAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTP 637

Query: 61  QIAMPTESRNKFPLEWWKT 79
            +A PTE+  + P    KT
Sbjct: 638 SLAEPTENGQRTPFANEKT 656



 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
           +A+  EH E  P    NT   PAEP E   +  N       +G    R+ T      +  
Sbjct: 660 SAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFP 719

Query: 63  AMPTESRNK 71
           A PTE+R +
Sbjct: 720 AEPTENRER 728



 Score = 28.9 bits (63), Expect = 7.6
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 6   TAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSG---LRKGTKKYPDYIQI 62
           +A+  EH E  P    NT   PAEP E   +  N       +G    R+ T      +  
Sbjct: 479 SAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRETTANEKTTLSP 538

Query: 63  AMPTESR 69
             PTE+R
Sbjct: 539 VEPTENR 545


>gi|52630445 monocyte to macrophage differentiation-associated
           precursor [Homo sapiens]
          Length = 238

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%)

Query: 237 YLFIKEYSP--RHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYIT 284
           +L ++E  P   H  W+    WL++A G I + + HE Y + V + +Y+T
Sbjct: 115 WLNLRELGPLASHMRWF---IWLMAAGGTIYVFLYHEKYKV-VELFFYLT 160


>gi|16418457 solute carrier family 26, member 8 isoform a [Homo
           sapiens]
          Length = 970

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 19  DPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESRNKFPLE 75
           D + T  R  E   E +KN N + K  SS L       P +I+I  P E  ++  LE
Sbjct: 809 DESETVIR--ETYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLE 863


>gi|20336285 solute carrier family 26, member 8 isoform b [Homo
           sapiens]
          Length = 865

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 19  DPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAMPTESRNKFPLE 75
           D + T  R  E   E +KN N + K  SS L       P +I+I  P E  ++  LE
Sbjct: 704 DESETVIR--ETYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLE 758


>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
          Length = 1519

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 5   ETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYIQIAM 64
           E A  +E L N PS   + +  P   + +E   G+GKP+S    L+   +K P   +   
Sbjct: 406 EDASHQEALGNLPSP--SEHKLPECHLVKEEYEGSGKPESEPKELKTAGEKEPQLSEACG 463

Query: 65  PTE 67
           PTE
Sbjct: 464 PTE 466


>gi|155030226 phosphatidylinositol 4-kinase type 3 alpha isoform 2
           [Homo sapiens]
          Length = 2044

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 89  NLVLTTVMITVVHERVPP-KELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQW 146
           NL +   +I V+  R+PP KE  P L   F D+     W +SV     +   GLW  +W
Sbjct: 708 NLGVLIPVIAVLTRRLPPIKEAKPRLQKLFRDF-----WLYSVLMGFAVEGSGLWPEEW 761


>gi|8923754 serine/threonine kinase 32B [Homo sapiens]
          Length = 414

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 52  GTKKY--PDYIQIAMPTESRNKFPLEWWKTGI 81
           GTK Y  P+  Q+ M       +P++WW  GI
Sbjct: 182 GTKPYMAPEVFQVYMDRGPGYSYPVDWWSLGI 213


>gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens]
          Length = 301

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 15/61 (24%)

Query: 240 IKEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKN 299
           +KE +P+H  +  L+CW      I+C+LV       ++I   Y+T +  W Y ++   ++
Sbjct: 119 LKEKAPKHVGFSVLLCW------IVCMLV-------NIIFPMYVTGK--WNYTNITVNED 163

Query: 300 L 300
           L
Sbjct: 164 L 164


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.140    0.465 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,815,717
Number of Sequences: 37866
Number of extensions: 656341
Number of successful extensions: 2149
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2100
Number of HSP's gapped (non-prelim): 39
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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