Guide to the Human Genome
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Name: ZNF141 Sequence: fasta or formatted (474aa) NCBI GI: 4507993
Description:

zinc finger protein 141

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         18           1
 C cysteine            6.1         29           1
 D aspartate           3.2         15           1
 E glutamate           8.6         41           2
 F phenylalanine       5.5         26           1
 G glycine             5.1         24           2
 H histidine           6.8         32           1
 I isoleucine          4.6         22           2
 K lysine             15.0         71           2
 L leucine             5.5         26           2
 M methionine          0.6          3           1
 N asparagine          3.8         18           1
 P proline             3.6         17           2
 Q glutamine           3.2         15           2
 R arginine            5.3         25           2
 S serine              6.5         31           3
 T threonine           6.3         30           2
 V valine              3.2         15           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 141 
LOC654254             0.767   zinc finger protein LOC654254 
ZNF595                0.677   zinc finger protein 595 
ZNF718                0.667   zinc finger protein 718 
ZNF431                0.654   zinc finger protein 431 
ZNF273                0.654   zinc finger protein 273 
LOC646864             0.652   PREDICTED: similar to hCG36734 
LOC646864             0.652   PREDICTED: similar to hCG36734 
LOC646864             0.652   PREDICTED: similar to hCG36734 
ZNF737                0.644   zinc finger protein 737 
ZNF737                0.644   PREDICTED: zinc finger protein 737 
ZNF737                0.644   PREDICTED: zinc finger protein 737 
ZNF737                0.644   PREDICTED: zinc finger protein 737 
ZNF479                0.642   zinc finger protein 479 
ZNF85                 0.641   zinc finger protein 85 
ZNF708                0.638   zinc finger protein 708 
ZNF92                 0.638   zinc finger protein 92 isoform 2 
ZNF726                0.637   PREDICTED: zinc finger protein 726 
ZNF726                0.637   PREDICTED: zinc finger protein 726 
LOC730110             0.637   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF726                0.637   PREDICTED: zinc finger protein 726 
LOC730110             0.637   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
LOC730110             0.635   PREDICTED: Zinc finger protein ENSP00000351689 [Hom...
ZNF93                 0.634   zinc finger protein 93 
ZNF675                0.633   zinc finger protein 675 
ZNF730                0.632   PREDICTED: zinc finger protein 730 
ZNF730                0.632   PREDICTED: zinc finger protein 730 
ZNF626                0.632   zinc finger protein 626 isoform 1 
ZNF429                0.632   zinc finger protein 429 
ZNF716                0.631   zinc finger protein 716 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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