Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CCDC124 Sequence: fasta or formatted (223aa) NCBI GI: 209969700
Description:

coiled-coil domain containing 124

Referenced in:

Coiled-Coil Proteins

Other entries for this name:
alt mRNA [223aa] coiled-coil domain containing 124
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.0         29           3
 C cysteine            0.0          0           0
 D aspartate           5.8         13           3
 E glutamate          13.5         30           3
 F phenylalanine       1.8          4           1
 G glycine             1.8          4           2
 H histidine           1.8          4           1
 I isoleucine          1.3          3           1
 K lysine             11.7         26           2
 L leucine             8.5         19           2
 M methionine          2.2          5           1
 N asparagine          3.6          8           1
 P proline             4.9         11           1
 Q glutamine           5.4         12           1
 R arginine           11.2         25           2
 S serine              4.0          9           2
 T threonine           3.6          8           1
 V valine              4.5         10           1
 W tryptophan          0.9          2           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 124 
CCDC124               1.000   coiled-coil domain containing 124 
EIF5B                 0.078   eukaryotic translation initiation factor 5B 
MAP7D2                0.078   MAP7 domain containing 2 
INCENP                0.063   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.063   inner centromere protein antigens 135/155kDa isofor...
LOC727832             0.058   golgi autoantigen, golgin subfamily a-like 
PLEC1                 0.058   plectin 1 isoform 11 
PLEC1                 0.058   plectin 1 isoform 10 
PLEC1                 0.058   plectin 1 isoform 8 
PLEC1                 0.058   plectin 1 isoform 7 
PLEC1                 0.058   plectin 1 isoform 6 
PLEC1                 0.058   plectin 1 isoform 3 
PLEC1                 0.058   plectin 1 isoform 2 
PLEC1                 0.058   plectin 1 isoform 1 
CHAF1A                0.056   chromatin assembly factor 1, subunit A (p150) 
LOC283685             0.054   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.054   trichohyalin 
MYH10                 0.054   myosin, heavy polypeptide 10, non-muscle 
GIGYF2                0.051   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.051   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.051   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.051   GRB10 interacting GYF protein 2 isoform b 
DYX1C1                0.051   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
DYX1C1                0.051   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.051   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
DEF6                  0.049   differentially expressed in FDCP 6 homolog 
MYO18A                0.049   myosin 18A isoform b 
MYO18A                0.049   myosin 18A isoform a 
MINK1                 0.049   misshapen/NIK-related kinase isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press