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Search of human proteins with 209862787
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209862787 hypothetical protein LOC100191040 [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209862787 hypothetical protein LOC100191040 [Homo sapiens] 732 0.0
gi|210147453 nuclear localized factor 3 [Homo sapiens] 159 5e-39
gi|147903292 nuclear localized factor 1 [Homo sapiens] 145 5e-35
gi|157278361 nuclear localized factor 2 [Homo sapiens] 122 5e-28
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 3e-06
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 48 1e-05
gi|238550198 synaptotagmin III [Homo sapiens] 47 3e-05
gi|238550196 synaptotagmin III [Homo sapiens] 47 3e-05
gi|14150054 synaptotagmin III [Homo sapiens] 47 3e-05
gi|156105697 ring finger and CCCH-type zinc finger domains 2 iso... 45 8e-05
gi|156105699 ring finger and CCCH-type zinc finger domains 2 iso... 45 8e-05
gi|14249614 synaptotagmin-like 1 [Homo sapiens] 44 3e-04
gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo sa... 43 5e-04
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 43 5e-04
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 43 5e-04
gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo s... 43 5e-04
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 43 5e-04
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 43 5e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 8e-04
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 42 8e-04
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 42 8e-04
gi|123173752 synaptotagmin XIV-like [Homo sapiens] 42 0.001
gi|216548478 synaptotagmin XI [Homo sapiens] 41 0.001
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 41 0.001
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 41 0.002
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 41 0.002
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 41 0.002
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 41 0.002
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 41 0.002
>gi|209862787 hypothetical protein LOC100191040 [Homo sapiens]
Length = 353
Score = 732 bits (1890), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MWLLEKAGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDP 60
MWLLEKAGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDP
Sbjct: 1 MWLLEKAGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDP 60
Query: 61 GGAVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPA 120
GGAVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPA
Sbjct: 61 GGAVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPA 120
Query: 121 AQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTS 180
AQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTS
Sbjct: 121 AQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTS 180
Query: 181 PHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVS 240
PHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVS
Sbjct: 181 PHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVS 240
Query: 241 AEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDL 300
AEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDL
Sbjct: 241 AEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDL 300
Query: 301 AARSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLGGGLGPGSSLAPTHLSL 353
AARSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLGGGLGPGSSLAPTHLSL
Sbjct: 301 AARSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLGGGLGPGSSLAPTHLSL 353
>gi|210147453 nuclear localized factor 3 [Homo sapiens]
Length = 421
Score = 159 bits (401), Expect = 5e-39
Identities = 146/429 (34%), Positives = 187/429 (43%), Gaps = 110/429 (25%)
Query: 1 MWLLEKAGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDP 60
MW LE+ G+ E A + + GP S NVLTPD+IP FFIPP+LP
Sbjct: 6 MWFLERLR---GSGENGAARGVGSEAGDKASKGPLYS---NVLTPDKIPDFFIPPKLPSG 59
Query: 61 -------------------GGAVP----------------------AARRHVA------- 72
A P AA RHV
Sbjct: 60 PAEGEGQAALGPSTSEQNLASAAPRQTPRSPRLPAKLAAESKSLLKAATRHVIQIESAED 119
Query: 73 ------------GRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAG-GLP 119
+G + S+P G+A L ESPHTRR+ESLFH A A G P
Sbjct: 120 WLSEEATDADPQAQGAMSLPSVPKAQTSYGFAMLAESPHTRRKESLFHSEHGALAQVGSP 179
Query: 120 AAQSRLHVSAPDL----------------RLCRAPDSDTASSPDSSPFGSP--------- 154
A R + + R +SDT SS +SSPFGSP
Sbjct: 180 GAGRRRAAAKANGGDGGPREAGGALMSPGRYFSGGESDTGSSAESSPFGSPLLSRSVSLL 239
Query: 155 ---------RPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLR 205
+ R V R SLS + S+ D SP S RR PP + +
Sbjct: 240 KGFAQDSQAKVSQLRHSVGRHGSLSADD-STPDASPGSRRRLTRRAPPEPGPE----SGQ 294
Query: 206 PTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLR 265
E + +GPRG +RL EY+AG RLR+ L++AEGL S CCV L L
Sbjct: 295 ARGEHTVHVGPRGS-VRLLAEYEAGQARLRVHLLAAEGLYDRLCDARSIN--CCVGLCLV 351
Query: 266 PRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGEC 325
P + ++Q+S +VK S P+FNEDFFFDGLGP + +LR KV+++G+ L+RD LLGE
Sbjct: 352 PG-KLQKQRSTIVKNSRRPVFNEDFFFDGLGPASVRKLALRIKVVNKGSSLKRDTLLGEK 410
Query: 326 ETPLIALLP 334
E PL +LLP
Sbjct: 411 ELPLTSLLP 419
>gi|147903292 nuclear localized factor 1 [Homo sapiens]
Length = 369
Score = 145 bits (366), Expect = 5e-35
Identities = 140/383 (36%), Positives = 168/383 (43%), Gaps = 66/383 (17%)
Query: 1 MWLLEKAGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDP 60
MW LE+ + W G R A T+AC NVLTPDRIP+F IPPRL P
Sbjct: 1 MWCLERLRLGPECLRRSGDWLLPG--RARGAKSRTTAACANVLTPDRIPEFCIPPRLM-P 57
Query: 61 GGAVPAARR---------HVAGRG-----LPATCSLPHLAGRE---GWAFLPESPHTRRR 103
A+ A R AGR A SLPHL G+ L ESPHTRR+
Sbjct: 58 RLALAALRNSWVEEAGMDEGAGRTDWDPRSQAALSLPHLPRVRTAYGFCALLESPHTRRK 117
Query: 104 ESLFHGPPPAPAGGLPAAQSRLHVSAPD-----LRLCRAPDSDTASSPDSSPFGSPRP-- 156
ESL G PPAP P A + PD LR+ RAP T ++P G PRP
Sbjct: 118 ESLLLGGPPAPR---PRAHTYGGGGGPDALLGTLRVPRAPGPATPAAP-----GCPRPPQ 169
Query: 157 -----------------GL-------GR-RRVSRPHSLSP-EKASSADTSPHSPRRAGPP 190
GL GR RR++R S+S + SP RA
Sbjct: 170 DALARRPRGCRLLRVPDGLLSRALRAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPST 229
Query: 191 TPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSR 250
+PP + F R E + LG G LRL+ EY G GRLRLRL+ AE
Sbjct: 230 SPPSSRVPF---PERLEAEGTVALGRAGDALRLAAEYCPGTGRLRLRLLRAES--PAGGA 284
Query: 251 PGSGGGGCCVVLRLRPRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVL 310
PG C + L LRP Q S VV S F++DF FDGL ++ ++R K
Sbjct: 285 PGPRAVSCRLSLVLRPPGTALRQCSTVVGRSRKASFDQDFCFDGLSEDEVRRLAVRVKAR 344
Query: 311 DRGAGLRRDVLLGECETPLIALL 333
D G G R LLG+ E L ALL
Sbjct: 345 DEGRGRERGRLLGQGELSLGALL 367
>gi|157278361 nuclear localized factor 2 [Homo sapiens]
Length = 364
Score = 122 bits (306), Expect = 5e-28
Identities = 131/364 (35%), Positives = 156/364 (42%), Gaps = 63/364 (17%)
Query: 25 LFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDP--------GGAVPA---------- 66
L S P A VLTP+RIP+F IPPRLP P AVP
Sbjct: 7 LCSSAAGSSAPKPAFAKVLTPNRIPEFCIPPRLPAPCTLESPIRAAAVPRRCAAESDLWP 66
Query: 67 -ARRHVAGRG-----LPATCSLPHLAGRE---GWAFLPESPHTRRRESLFHGPPPAPAGG 117
A AGR A SLPHL G+ L ESPHTRR+ESL G PPAP
Sbjct: 67 RAADEDAGRTDWDPRSQAALSLPHLPRVRTTYGFCALLESPHTRRKESLLLGGPPAPR-- 124
Query: 118 LPAAQSRLHVSAPDL---RLC--RAPDSDTASSP-------DSSPFGSPRPGLGR----- 160
P A S PD LC R P T ++P D+ G R L R
Sbjct: 125 -PRAHSCGGGGGPDAPLGTLCGPRGPGPATPAAPGGPRLPQDALAAGPRRCRLLRVPDGL 183
Query: 161 ----------RRVSRPHSLSP-EKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRE 209
RR++R S+S + SP RA P + PL L +L +
Sbjct: 184 LSRALRAGRSRRLARVRSVSSGNEDEERRAGSESPARA-PSSSPLSSRAPLPERLEA--K 240
Query: 210 SVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVR 269
+ LG G LRL+ EY G RLRLRL+ AE L PG C + L LRP
Sbjct: 241 GTVALGRAGDALRLAAEYCPGTRRLRLRLLRAESLFG--GAPGPRAVRCRLSLVLRPPGT 298
Query: 270 PREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGECETPL 329
R Q S VV S F++DF FDGL ++ ++R K D G G R LLG+ E L
Sbjct: 299 ARWQCSAVVGRSRKASFDQDFCFDGLSEDEVRRLAVRVKARDEGRGRDRGRLLGQGELSL 358
Query: 330 IALL 333
ALL
Sbjct: 359 GALL 362
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.1 bits (118), Expect = 3e-06
Identities = 55/194 (28%), Positives = 71/194 (36%), Gaps = 25/194 (12%)
Query: 10 KVGAAEPAARWAPSGLFSKRRAP--GPPTSACPNVLTPDRI--PQFFIPPRLPDPGGA-V 64
K G A P+ +WAP+ + +P GP T + TP P P P P GA
Sbjct: 951 KGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT 1010
Query: 65 PAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSR 124
P A + +G PA P A A P + L G P PA LP+ +
Sbjct: 1011 PPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKG- 1069
Query: 125 LHVSAPDLRLCRAPDSDTASSPDS-----SPFGSPRPGLGRRRVSRPHSLSPEKASSADT 179
+ P L+ P + T SP SP G+P P P + P T
Sbjct: 1070 -GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP---------PAATPPSPKGGLAT 1119
Query: 180 SPHSPRRAGPPTPP 193
PH G PT P
Sbjct: 1120 PPHK----GAPTTP 1129
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 19/184 (10%)
Query: 10 KVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDPGGAVPAARR 69
K A PA + P+ S + AP PP + P+ P P P P P A P + +
Sbjct: 919 KKARATPAPKGIPASP-SPKGAPTPPAATPPS---PKGGPATPSPKWAPTPPAATPPSPK 974
Query: 70 HVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSA 129
P P A P +P + + PP+P G PAA
Sbjct: 975 GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS-PAA-------T 1026
Query: 130 PDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGP 189
P + P + T SP SP +P P + + P + P S P +P G
Sbjct: 1027 PFPKGASTPPAATPPSPKGSPAATPLP---KGAPTTPAATLP----SPKGGPATPSLKGA 1079
Query: 190 PTPP 193
PTPP
Sbjct: 1080 PTPP 1083
Score = 31.2 bits (69), Expect = 1.5
Identities = 49/187 (26%), Positives = 66/187 (35%), Gaps = 36/187 (19%)
Query: 10 KVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIP---PRLPDPGGAVPA 66
K G A P+ + AP+ P S + TP P P P G A P+
Sbjct: 1183 KGGLATPSPKGAPT------TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPS 1236
Query: 67 ARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLH 126
+ G P T + + + G P +P + + PP+ GGL H
Sbjct: 1237 PK------GAPTTPAATPPSPKGG----PATPPPKGAPTPPAATPPSLKGGLATPP---H 1283
Query: 127 VSAPDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRR 186
AP+ P T SP P SP G P + +P S SP +P
Sbjct: 1284 KGAPN------PAVVTPPSPKGGPATSPPKG-----APTPPAATPP---SPKGSPGTPPP 1329
Query: 187 AGPPTPP 193
G PTPP
Sbjct: 1330 KGAPTPP 1336
Score = 29.6 bits (65), Expect = 4.3
Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 35/195 (17%)
Query: 31 APGPPTSACPN---VLTPDRIPQFFIPPRLPDPGGAVPAARRHVAGRGLPATCSLPHLAG 87
AP P + P VL P+ IP+ P LP P G P ++ G+ T +L +A
Sbjct: 711 APSPQNTCAPLATLVLAPE-IPKSVPSPSLP-PAGTPPGTKKV---DGISHTSALAPVAS 765
Query: 88 REGWAFLPESPHTRRRES----LFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTA 143
+S + S + P+P G + Q++ R P +
Sbjct: 766 SPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTK-----------RPPTKKGS 814
Query: 144 SSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQ 203
+ PD+ P G+ + S PE + S S SP PTPP +
Sbjct: 815 AGPDT-PIGNLSSPVSPVEAS----FLPENSLSFQGSKDSPATTHSPTPP-------SPK 862
Query: 204 LRPTRESVLRLGPRG 218
PT +V L P+G
Sbjct: 863 GAPTPSAVTPLSPKG 877
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 48.1 bits (113), Expect = 1e-05
Identities = 86/309 (27%), Positives = 111/309 (35%), Gaps = 28/309 (9%)
Query: 13 AAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFI--PPRLPDPGGAVPAARRH 70
A P A P+ RR G PT P + P P PP L P A A+R
Sbjct: 294 ALPPHAHRRPASALPSRR-DGTPTKTTPCEIPPP-FPNLLQHRPPLLAFPQ-AKSASR-- 348
Query: 71 VAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAP 130
G G+ L H G P+ P R RE+ PPP P P + L + P
Sbjct: 349 TPGDGVSRLPVLCHSKEPAGSTPAPQVP-ARERET----PPPPP----PPPAANLLLLGP 399
Query: 131 DLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRR--AG 188
RA T P S G PR G R + HS+ KA+ A +P +P G
Sbjct: 400 S---GRARSHSTPLPPQGS--GQPR---GERELPNSHSMICPKAAGAPAAPPAPAALLPG 451
Query: 189 PPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPR 248
PP + ++ T SVL GP G TE + L S +P
Sbjct: 452 PPKDKAVSYTMVYSAVKVTTHSVLPAGPPLGAGEPKTEKEISVLHGMLCTSSRPPVPGKT 511
Query: 249 SRPGSGGGGCCVVLRLRPRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRA- 307
S G G VL R + P++ GL P A SL+A
Sbjct: 512 SPHGGAMGAAAGVLHHRGCLASPHSLPDPTVGPLTPLWTYPATAAGLKRPP-AYESLKAG 570
Query: 308 KVLDRGAGL 316
VL++G G+
Sbjct: 571 GVLNKGCGV 579
>gi|238550198 synaptotagmin III [Homo sapiens]
Length = 590
Score = 47.0 bits (110), Expect = 3e-05
Identities = 59/224 (26%), Positives = 87/224 (38%), Gaps = 41/224 (18%)
Query: 112 PAPAGGLPAAQSRLHVS--APDLR------------LCRAPDSDTASSPDSSPFGSPRPG 157
P GGLP+AQS V+ AP R L PD + P + P P PG
Sbjct: 202 PPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPDPSSEERPPALPL--PLPG 259
Query: 158 LGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPR 217
G + + PE T P R G P G
Sbjct: 260 -GEEKAKLIGQIKPELYQG--TGPGGRRSGGGPG-----------------SGEAGTGAP 299
Query: 218 GGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRV 277
G++ + Y G +L +R++ A LP ++ +G V + L P R ++ Q++V
Sbjct: 300 CGRISFALRYLYGSDQLVVRILQALDLP---AKDSNGFSDPYVKIYLLPD-RKKKFQTKV 355
Query: 278 VKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVL 321
+ + NP+FNE F F + +LA R L V D R D++
Sbjct: 356 HRKTLNPVFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLI 398
>gi|238550196 synaptotagmin III [Homo sapiens]
Length = 590
Score = 47.0 bits (110), Expect = 3e-05
Identities = 59/224 (26%), Positives = 87/224 (38%), Gaps = 41/224 (18%)
Query: 112 PAPAGGLPAAQSRLHVS--APDLR------------LCRAPDSDTASSPDSSPFGSPRPG 157
P GGLP+AQS V+ AP R L PD + P + P P PG
Sbjct: 202 PPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPDPSSEERPPALPL--PLPG 259
Query: 158 LGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPR 217
G + + PE T P R G P G
Sbjct: 260 -GEEKAKLIGQIKPELYQG--TGPGGRRSGGGPG-----------------SGEAGTGAP 299
Query: 218 GGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRV 277
G++ + Y G +L +R++ A LP ++ +G V + L P R ++ Q++V
Sbjct: 300 CGRISFALRYLYGSDQLVVRILQALDLP---AKDSNGFSDPYVKIYLLPD-RKKKFQTKV 355
Query: 278 VKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVL 321
+ + NP+FNE F F + +LA R L V D R D++
Sbjct: 356 HRKTLNPVFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLI 398
>gi|14150054 synaptotagmin III [Homo sapiens]
Length = 590
Score = 47.0 bits (110), Expect = 3e-05
Identities = 59/224 (26%), Positives = 87/224 (38%), Gaps = 41/224 (18%)
Query: 112 PAPAGGLPAAQSRLHVS--APDLR------------LCRAPDSDTASSPDSSPFGSPRPG 157
P GGLP+AQS V+ AP R L PD + P + P P PG
Sbjct: 202 PPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPDPSSEERPPALPL--PLPG 259
Query: 158 LGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPR 217
G + + PE T P R G P G
Sbjct: 260 -GEEKAKLIGQIKPELYQG--TGPGGRRSGGGPG-----------------SGEAGTGAP 299
Query: 218 GGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRV 277
G++ + Y G +L +R++ A LP ++ +G V + L P R ++ Q++V
Sbjct: 300 CGRISFALRYLYGSDQLVVRILQALDLP---AKDSNGFSDPYVKIYLLPD-RKKKFQTKV 355
Query: 278 VKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVL 321
+ + NP+FNE F F + +LA R L V D R D++
Sbjct: 356 HRKTLNPVFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLI 398
>gi|156105697 ring finger and CCCH-type zinc finger domains 2
isoform 1 [Homo sapiens]
Length = 1191
Score = 45.4 bits (106), Expect = 8e-05
Identities = 43/171 (25%), Positives = 59/171 (34%), Gaps = 10/171 (5%)
Query: 40 PNVLTPDRIPQF----FIPPRLPDPGGAVPAARRHVAGRGLPATCSLPHLAGREGWAFLP 95
P P +PQ+ + PP P G P R V +P + SLP + +
Sbjct: 602 PRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPES-SLPPASMPYADHYST 660
Query: 96 ESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPD----SDTASSPDSSPF 151
SP R S + PPP P G +P S ++ D R P D S P
Sbjct: 661 FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM 720
Query: 152 GSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGP-PTPPLFHLDFLC 201
+ + + ++ S A P PR P P P HL C
Sbjct: 721 DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSC 771
>gi|156105699 ring finger and CCCH-type zinc finger domains 2
isoform 2 [Homo sapiens]
Length = 1064
Score = 45.4 bits (106), Expect = 8e-05
Identities = 43/171 (25%), Positives = 59/171 (34%), Gaps = 10/171 (5%)
Query: 40 PNVLTPDRIPQF----FIPPRLPDPGGAVPAARRHVAGRGLPATCSLPHLAGREGWAFLP 95
P P +PQ+ + PP P G P R V +P + SLP + +
Sbjct: 602 PRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPES-SLPPASMPYADHYST 660
Query: 96 ESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPD----SDTASSPDSSPF 151
SP R S + PPP P G +P S ++ D R P D S P
Sbjct: 661 FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM 720
Query: 152 GSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGP-PTPPLFHLDFLC 201
+ + + ++ S A P PR P P P HL C
Sbjct: 721 DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSC 771
>gi|14249614 synaptotagmin-like 1 [Homo sapiens]
Length = 550
Score = 43.5 bits (101), Expect = 3e-04
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 23/246 (9%)
Query: 87 GREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSP 146
G E + E+P R RE+ P A +Q++ D ++C A ++D P
Sbjct: 134 GPEPRLTIDEAPQERLRETEASDPEEA-------SQAQEDPGQGDQQVC-AEEADPELEP 185
Query: 147 DSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRP 206
S PRP + + + + E+A D S + L Q+
Sbjct: 186 ASGGEQEPRPQQAQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTLSGSQMSL 245
Query: 207 TRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRP 266
+ ++ G + + Y+ G LR+ ++ +GL R R ++
Sbjct: 246 SGDA--EAVQVRGSVHFALHYEPGAAELRVHVIQCQGLAAARRRRSDP--------YVKS 295
Query: 267 RVRPREQQSR---VVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLG 323
+ P +Q R V K + NP+FNE + + +L R L V R + L R++ LG
Sbjct: 296 YLLPDKQSKRKTAVKKRNLNPVFNETLRYS-VPQAELQGRVLSLSVWHRES-LGRNIFLG 353
Query: 324 ECETPL 329
E E PL
Sbjct: 354 EVEVPL 359
Score = 39.3 bits (90), Expect = 0.005
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 273 QQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDV 320
Q++RVV+ S +P+FN +DG GP DL + D GA R +
Sbjct: 448 QRTRVVRRSLSPVFNHTMVYDGFGPADLRQACAELSLWDHGALANRQL 495
>gi|15826862 coiled-coil domain containing 120 isoform 3 [Homo
sapiens]
Length = 630
Score = 42.7 bits (99), Expect = 5e-04
Identities = 64/231 (27%), Positives = 77/231 (33%), Gaps = 58/231 (25%)
Query: 12 GAAEPAARWAPSGLFSKRRAPGPPTSACPNVL--TPDRIPQFFI-------PPRLPDPGG 62
GA P A APS A GPP VL P P F PPR P
Sbjct: 373 GAGSPPAPLAPS-------ASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSS 425
Query: 63 AVPAARRHVAGRGLPATC-----------SLPHLAGREGWAFLPES-----PHTRRRE-- 104
A PA+R LP C LP G GW LP + P +RR
Sbjct: 426 AAPASR---GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLL 482
Query: 105 SLFHGPPPAPAGGLPAAQSRL---HVSAPDLRLCRAPDSDTASSPDSSP-----FGSPR- 155
++ GPPP A + R H A + C P + A P+ P P
Sbjct: 483 TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLP-PEAAEGPEVHPNPLLWMPPPTR 541
Query: 156 -PGLGRRRVSRPHSLSPEK---------ASSADTSPHSPRRAGPPTPPLFH 196
P G R + +L + A+ P P GPP PP H
Sbjct: 542 IPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLP-SVGPPHPPFLH 591
Score = 33.5 bits (75), Expect = 0.30
Identities = 53/199 (26%), Positives = 73/199 (36%), Gaps = 37/199 (18%)
Query: 22 PSGLFSKRRAPGPP---------TSACPNVLTPDRIPQFFIPPRLPD----------PGG 62
P G FS P PP + P TP + P + L P
Sbjct: 230 PHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTR 289
Query: 63 AVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRR----RESLFHGPPPAPAG-- 116
++P + GR +PAT L AG + PE H+R+ ++S P PA
Sbjct: 290 SLPRSASSFEGRSVPATPVLTRGAGPQ--LCKPEGLHSRQWSGSQDSQMGFPRADPASDR 347
Query: 117 -GLPAAQSRLHVSAPDLRLCRAPDSDTASSPDS-SPFGSPRPGLGRRRVSRPHSLSPEKA 174
L A++R S+ L + RA S P +P S P V + + E+
Sbjct: 348 ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPP------VCKSSEVLYERP 401
Query: 175 SSADTSPHSPRRAGPPTPP 193
T S R AGPP PP
Sbjct: 402 QP--TPAFSSRTAGPPDPP 418
>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
sapiens]
Length = 618
Score = 42.7 bits (99), Expect = 5e-04
Identities = 64/231 (27%), Positives = 77/231 (33%), Gaps = 58/231 (25%)
Query: 12 GAAEPAARWAPSGLFSKRRAPGPPTSACPNVL--TPDRIPQFFI-------PPRLPDPGG 62
GA P A APS A GPP VL P P F PPR P
Sbjct: 361 GAGSPPAPLAPS-------ASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSS 413
Query: 63 AVPAARRHVAGRGLPATC-----------SLPHLAGREGWAFLPES-----PHTRRRE-- 104
A PA+R LP C LP G GW LP + P +RR
Sbjct: 414 AAPASR---GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLL 470
Query: 105 SLFHGPPPAPAGGLPAAQSRL---HVSAPDLRLCRAPDSDTASSPDSSP-----FGSPR- 155
++ GPPP A + R H A + C P + A P+ P P
Sbjct: 471 TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLP-PEAAEGPEVHPNPLLWMPPPTR 529
Query: 156 -PGLGRRRVSRPHSLSPEK---------ASSADTSPHSPRRAGPPTPPLFH 196
P G R + +L + A+ P P GPP PP H
Sbjct: 530 IPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLP-SVGPPHPPFLH 579
Score = 33.5 bits (75), Expect = 0.30
Identities = 53/199 (26%), Positives = 73/199 (36%), Gaps = 37/199 (18%)
Query: 22 PSGLFSKRRAPGPP---------TSACPNVLTPDRIPQFFIPPRLPD----------PGG 62
P G FS P PP + P TP + P + L P
Sbjct: 218 PHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTR 277
Query: 63 AVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRR----RESLFHGPPPAPAG-- 116
++P + GR +PAT L AG + PE H+R+ ++S P PA
Sbjct: 278 SLPRSASSFEGRSVPATPVLTRGAGPQ--LCKPEGLHSRQWSGSQDSQMGFPRADPASDR 335
Query: 117 -GLPAAQSRLHVSAPDLRLCRAPDSDTASSPDS-SPFGSPRPGLGRRRVSRPHSLSPEKA 174
L A++R S+ L + RA S P +P S P V + + E+
Sbjct: 336 ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPP------VCKSSEVLYERP 389
Query: 175 SSADTSPHSPRRAGPPTPP 193
T S R AGPP PP
Sbjct: 390 QP--TPAFSSRTAGPPDPP 406
>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
Length = 649
Score = 42.7 bits (99), Expect = 5e-04
Identities = 64/231 (27%), Positives = 77/231 (33%), Gaps = 58/231 (25%)
Query: 12 GAAEPAARWAPSGLFSKRRAPGPPTSACPNVL--TPDRIPQFFI-------PPRLPDPGG 62
GA P A APS A GPP VL P P F PPR P
Sbjct: 361 GAGSPPAPLAPS-------ASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSS 413
Query: 63 AVPAARRHVAGRGLPATC-----------SLPHLAGREGWAFLPES-----PHTRRRE-- 104
A PA+R LP C LP G GW LP + P +RR
Sbjct: 414 AAPASR---GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLL 470
Query: 105 SLFHGPPPAPAGGLPAAQSRL---HVSAPDLRLCRAPDSDTASSPDSSP-----FGSPR- 155
++ GPPP A + R H A + C P + A P+ P P
Sbjct: 471 TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLP-PEAAEGPEVHPNPLLWMPPPTR 529
Query: 156 -PGLGRRRVSRPHSLSPEK---------ASSADTSPHSPRRAGPPTPPLFH 196
P G R + +L + A+ P P GPP PP H
Sbjct: 530 IPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLP-SVGPPHPPFLH 579
Score = 33.5 bits (75), Expect = 0.30
Identities = 53/199 (26%), Positives = 73/199 (36%), Gaps = 37/199 (18%)
Query: 22 PSGLFSKRRAPGPP---------TSACPNVLTPDRIPQFFIPPRLPD----------PGG 62
P G FS P PP + P TP + P + L P
Sbjct: 218 PHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTR 277
Query: 63 AVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRR----RESLFHGPPPAPAG-- 116
++P + GR +PAT L AG + PE H+R+ ++S P PA
Sbjct: 278 SLPRSASSFEGRSVPATPVLTRGAGPQ--LCKPEGLHSRQWSGSQDSQMGFPRADPASDR 335
Query: 117 -GLPAAQSRLHVSAPDLRLCRAPDSDTASSPDS-SPFGSPRPGLGRRRVSRPHSLSPEKA 174
L A++R S+ L + RA S P +P S P V + + E+
Sbjct: 336 ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPP------VCKSSEVLYERP 389
Query: 175 SSADTSPHSPRRAGPPTPP 193
T S R AGPP PP
Sbjct: 390 QP--TPAFSSRTAGPPDPP 406
>gi|254039610 coiled-coil domain containing 120 isoform 1 [Homo
sapiens]
Length = 661
Score = 42.7 bits (99), Expect = 5e-04
Identities = 64/231 (27%), Positives = 77/231 (33%), Gaps = 58/231 (25%)
Query: 12 GAAEPAARWAPSGLFSKRRAPGPPTSACPNVL--TPDRIPQFFI-------PPRLPDPGG 62
GA P A APS A GPP VL P P F PPR P
Sbjct: 373 GAGSPPAPLAPS-------ASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRAARPSS 425
Query: 63 AVPAARRHVAGRGLPATC-----------SLPHLAGREGWAFLPES-----PHTRRRE-- 104
A PA+R LP C LP G GW LP + P +RR
Sbjct: 426 AAPASR---GAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLL 482
Query: 105 SLFHGPPPAPAGGLPAAQSRL---HVSAPDLRLCRAPDSDTASSPDSSP-----FGSPR- 155
++ GPPP A + R H A + C P + A P+ P P
Sbjct: 483 TMLPGPPPVYAADSNSPLLRTKDPHTRATRTKPCGLP-PEAAEGPEVHPNPLLWMPPPTR 541
Query: 156 -PGLGRRRVSRPHSLSPEK---------ASSADTSPHSPRRAGPPTPPLFH 196
P G R + +L + A+ P P GPP PP H
Sbjct: 542 IPSAGERSGHKNLALEGLRDWYIRNSGLAAGPQRRPVLP-SVGPPHPPFLH 591
Score = 33.5 bits (75), Expect = 0.30
Identities = 53/199 (26%), Positives = 73/199 (36%), Gaps = 37/199 (18%)
Query: 22 PSGLFSKRRAPGPP---------TSACPNVLTPDRIPQFFIPPRLPD----------PGG 62
P G FS P PP + P TP + P + L P
Sbjct: 230 PHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNSVASPTSPTR 289
Query: 63 AVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRR----RESLFHGPPPAPAG-- 116
++P + GR +PAT L AG + PE H+R+ ++S P PA
Sbjct: 290 SLPRSASSFEGRSVPATPVLTRGAGPQ--LCKPEGLHSRQWSGSQDSQMGFPRADPASDR 347
Query: 117 -GLPAAQSRLHVSAPDLRLCRAPDSDTASSPDS-SPFGSPRPGLGRRRVSRPHSLSPEKA 174
L A++R S+ L + RA S P +P S P V + + E+
Sbjct: 348 ASLFVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPP------VCKSSEVLYERP 401
Query: 175 SSADTSPHSPRRAGPPTPP 193
T S R AGPP PP
Sbjct: 402 QP--TPAFSSRTAGPPDPP 418
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 42.7 bits (99), Expect = 5e-04
Identities = 60/240 (25%), Positives = 75/240 (31%), Gaps = 62/240 (25%)
Query: 20 WAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDPGGAVPAARRHVAGRGLPAT 79
W PS L R+ PP+ CP P PG P +R L
Sbjct: 19 WKPSSLIHPARSNQPPSRTCP-----------------PLPG---PPSRSRSPSSRLKLP 58
Query: 80 CSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPD 139
P LP SP PPP P P + P RL +
Sbjct: 59 ADPPRA--------LPGSPE----------PPPPPPPAAPHVLGARVAAGPTHRLSASHS 100
Query: 140 SDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDF 199
++ P + RPG GRR +R S +P + S + + PP PP
Sbjct: 101 RVSSRGPVGTK--PKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPP------ 152
Query: 200 LCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCC 259
R LRL G R E + RLR + R G GGGG C
Sbjct: 153 -----SRARSRSLRLSAPGS--RHDAEKASERNRLR---------RKKRLVLGRGGGGEC 196
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 42.7 bits (99), Expect = 5e-04
Identities = 60/240 (25%), Positives = 75/240 (31%), Gaps = 62/240 (25%)
Query: 20 WAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDPGGAVPAARRHVAGRGLPAT 79
W PS L R+ PP+ CP P PG P +R L
Sbjct: 19 WKPSSLIHPARSNQPPSRTCP-----------------PLPG---PPSRSRSPSSRLKLP 58
Query: 80 CSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPD 139
P LP SP PPP P P + P RL +
Sbjct: 59 ADPPRA--------LPGSPE----------PPPPPPPAAPHVLGARVAAGPTHRLSASHS 100
Query: 140 SDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDF 199
++ P + RPG GRR +R S +P + S + + PP PP
Sbjct: 101 RVSSRGPVGTK--PKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPP------ 152
Query: 200 LCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCC 259
R LRL G R E + RLR + R G GGGG C
Sbjct: 153 -----SRARSRSLRLSAPGS--RHDAEKASERNRLR---------RKKRLVLGRGGGGEC 196
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 8e-04
Identities = 73/248 (29%), Positives = 95/248 (38%), Gaps = 66/248 (26%)
Query: 35 PTSACPNVLTPDRIPQFFIPPRLPDPGGAV-PAARRHVAGRGLPATCSLPHLAGREGWAF 93
P + P +LTP PP P P V PAA R + G L AG G A
Sbjct: 17 PAARAPGLLTPR-------PPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 94 LPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSP--- 150
+PES AP G P SR S R P +T+ P SSP
Sbjct: 70 IPES---------------APRAG-PTRTSRPPASGRGER--APPAKNTSPGPVSSPGRA 111
Query: 151 FGSPRPG-LGRR--RVSRPHSLSPEKASSA------------DTSPHSPRRAGPPTPPLF 195
G+ RPG LG++ R+S +++ KA+ A DTS +P G P+P +
Sbjct: 112 SGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP---GTPSPAM- 167
Query: 196 HLDFLCCQLRPTRESVLRLG-PRGGQLRLSTEYQAGPGRLRLRLVSA------EGLPRPR 248
R +R + +G PR GP R + SA E P R
Sbjct: 168 --------ARRSRAAGTEVGLPRPAPSARPRPPTEGP---RKSVSSASEHSTTEPSPAAR 216
Query: 249 SRPGSGGG 256
RP +GGG
Sbjct: 217 RRPSAGGG 224
Score = 34.3 bits (77), Expect = 0.17
Identities = 49/180 (27%), Positives = 63/180 (35%), Gaps = 35/180 (19%)
Query: 31 APGPPTSACPNVLTPDRIPQFFIPPRL---PDPGGAVPAARRHVAGRGLPATCSLPHLAG 87
A GP +S+ +P P PP L P P P+ AT SL
Sbjct: 286 ALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQ----------ATTSLGSPTL 335
Query: 88 REGWAFLPESPHTRRRESLFHGPP----------PAPAGGLP----AAQSRLHVSAPDLR 133
+ +FLP P + PP P+P P A S +A +
Sbjct: 336 QATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH 395
Query: 134 LCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPP 193
L +AP S S P +PF P S P S S S A S +P PP+PP
Sbjct: 396 LLQAPFSPPPSPPVQAPFSPP--------ASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 447
Score = 32.7 bits (73), Expect = 0.50
Identities = 63/254 (24%), Positives = 84/254 (33%), Gaps = 35/254 (13%)
Query: 7 AGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDPGGAVPA 66
AG +VG PA P P S+ T + P R P GG +
Sbjct: 174 AGTEVGLPRPAPSARPR---PPTEGPRKSVSSASEHSTTEPSPA---ARRRPSAGGGLQR 227
Query: 67 -ARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPP---------APAG 116
A R ++ P + G P P + + L PP APA
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287
Query: 117 GLPAAQSRLHVSAPDLRLCRA--PDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKA 174
G P + S L +P + P T SP ++P LG + HS P
Sbjct: 288 G-PLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP--- 343
Query: 175 SSADTSPHSPRRAGPP-TPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGR 233
+ P SP PP PP L L Q P+ + L P L+T P
Sbjct: 344 ----SPPLSPLATPPPQAPPALALPPL--QAPPSPPASPPLSP------LATPSPQAPNA 391
Query: 234 LRLRLVSAEGLPRP 247
L + L+ A P P
Sbjct: 392 LAVHLLQAPFSPPP 405
Score = 32.3 bits (72), Expect = 0.66
Identities = 61/249 (24%), Positives = 89/249 (35%), Gaps = 37/249 (14%)
Query: 32 PGPPTSACPNVLTPDRIPQFFIPPRL---PDPGGAVPAARRHVAGRGLPATCSLPHLAGR 88
P PP S P P + P P L P P + P + P ++ HL
Sbjct: 343 PSPPLS--PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV-HLL-- 397
Query: 89 EGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDS 148
+ P SP + S PP +P+ P +Q+ ++AP L++ +P + SP +
Sbjct: 398 QAPFSPPPSPPVQAPFSPPASPPVSPSA-TPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 456
Query: 149 SPFGSPRPGLGR---------------------RRVSRPHSLSPEKA--SSADTSPHSPR 185
+P P L + + P + P +A S + + P SP
Sbjct: 457 TPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPL 516
Query: 186 RAGPP-TPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGL 244
PP PP+ L P L+ PR +GP RL L A G
Sbjct: 517 ATPPPQAPPVLAAPLLQVPPSPPASPTLQ-APRRPPTPGPDTSVSGP---RLTLALAPGP 572
Query: 245 PRPRSRPGS 253
P P SR S
Sbjct: 573 PPPPSRSPS 581
Score = 29.6 bits (65), Expect = 4.3
Identities = 72/272 (26%), Positives = 90/272 (33%), Gaps = 42/272 (15%)
Query: 97 SPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRP 156
+P R L PP +P P + L V + R P ++ A + P
Sbjct: 16 TPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAP 75
Query: 157 GLGRRRVSR-PHSLSPEKASSA-DTSP---HSPRRAGPPTPPLFHLDFLCCQLRPTRESV 211
G R SR P S E+A A +TSP SP RA T P P +
Sbjct: 76 RAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP-----------GPLGQKG 124
Query: 212 LRLG-----PRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVL-RLR 265
LR+ RG G R G P P S G V L R
Sbjct: 125 LRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPA 184
Query: 266 PRVRPR---EQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDV-- 320
P RPR E + V ++ E P AAR + G GL+R
Sbjct: 185 PSARPRPPTEGPRKSVSSASEHSTTE---------PSPAAR----RRPSAGGGLQRPASR 231
Query: 321 LLGECETPLIALLPPLGGGLGPGSSLAPTHLS 352
L TPL + P G G+ AP H S
Sbjct: 232 SLSSSATPLSS--PARSGPSARGTPRAPAHPS 261
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 42.0 bits (97), Expect = 8e-04
Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 28/229 (12%)
Query: 110 PPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPR--PGLGRRRVSRPH 167
P P PAG P + + S P T + P G P +G R H
Sbjct: 302 PGPGPAGRFPDQKPEVAPSDPG----------TTAPPREERTGGVGGYPAVGAREDRMSH 351
Query: 168 SLSP-EKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTE 226
P +AS+A P + R+ PP + T G L S
Sbjct: 352 PSGPYSQASAAAPQPAAARQPPPPEEEEEEANSYDSDEATTL----------GALEFSLL 401
Query: 227 YQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRV-RPREQQSRVVKCSANPI 285
Y L+ ++ A+GL + +G V L L P + + +++ ++ + NPI
Sbjct: 402 YDQDNSSLQCTIIKAKGL---KPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPI 458
Query: 286 FNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGECETPLIALLP 334
+NE + G+ D+ ++LR V D + +GE L L P
Sbjct: 459 WNETLVYHGITDEDMQRKTLRISVCDEDK-FGHNEFIGETRFSLKKLKP 506
Score = 38.5 bits (88), Expect = 0.009
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 209 ESVLRLGP--RGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRP 266
E V R+G G++ +S Y G L + ++ L + +G V L L+P
Sbjct: 540 EQVERVGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLA---AMDANGYSDPFVKLWLKP 596
Query: 267 RV-RPREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGEC 325
+ + + ++++ K + NP FNE+FF+D + DLA +SL V D G D +G C
Sbjct: 597 DMGKKAKHKTQIKKKTLNPEFNEEFFYD-IKHSDLAKKSLDISVWDYDIGKSND-YIGGC 654
Query: 326 ETPLIA 331
+ + A
Sbjct: 655 QLGISA 660
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 42.0 bits (97), Expect = 8e-04
Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 28/229 (12%)
Query: 110 PPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPR--PGLGRRRVSRPH 167
P P PAG P + + S P T + P G P +G R H
Sbjct: 298 PGPGPAGRFPDQKPEVAPSDPG----------TTAPPREERTGGVGGYPAVGAREDRMSH 347
Query: 168 SLSP-EKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTE 226
P +AS+A P + R+ PP + T G L S
Sbjct: 348 PSGPYSQASAAAPQPAAARQPPPPEEEEEEANSYDSDEATTL----------GALEFSLL 397
Query: 227 YQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRV-RPREQQSRVVKCSANPI 285
Y L+ ++ A+GL + +G V L L P + + +++ ++ + NPI
Sbjct: 398 YDQDNSSLQCTIIKAKGL---KPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPI 454
Query: 286 FNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGECETPLIALLP 334
+NE + G+ D+ ++LR V D + +GE L L P
Sbjct: 455 WNETLVYHGITDEDMQRKTLRISVCDEDK-FGHNEFIGETRFSLKKLKP 502
Score = 38.5 bits (88), Expect = 0.009
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 209 ESVLRLGP--RGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRP 266
E V R+G G++ +S Y G L + ++ L + +G V L L+P
Sbjct: 536 EQVERVGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLA---AMDANGYSDPFVKLWLKP 592
Query: 267 RV-RPREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGEC 325
+ + + ++++ K + NP FNE+FF+D + DLA +SL V D G D +G C
Sbjct: 593 DMGKKAKHKTQIKKKTLNPEFNEEFFYD-IKHSDLAKKSLDISVWDYDIGKSND-YIGGC 650
Query: 326 ETPLIA 331
+ + A
Sbjct: 651 QLGISA 656
>gi|123173752 synaptotagmin XIV-like [Homo sapiens]
Length = 645
Score = 41.6 bits (96), Expect = 0.001
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 17/145 (11%)
Query: 219 GQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRVV 278
G L + EY+A +L + +V A+GLP + R G VVL + R R R
Sbjct: 352 GDLDVIFEYRAASQKLTVTIVRAQGLP-DKDRSGVNSWQVHVVLLPGKKHRGRTNIQR-- 408
Query: 279 KCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLG-----------ECET 327
NP+F E F L P D+AA ++R + L + R+ ++G E E
Sbjct: 409 --GPNPVFREKVTFAKLEPRDVAACAVRFR-LYAARKMTRERMMGEKLFYLSHLHPEGEM 465
Query: 328 PLIALLPPLGGGLGPGSSLAPTHLS 352
+ +L P GS L+P+ +S
Sbjct: 466 KVTLVLEPRSNISSGGSPLSPSAVS 490
>gi|216548478 synaptotagmin XI [Homo sapiens]
Length = 431
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 GQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRVV 278
G+L++S YQ R+ + ++ A LP+ G G V R R ++++ V
Sbjct: 293 GELQVSLSYQPVAQRMTVVVLKARHLPK-MDITGLSGNPYVKVNVYYGRKRIAKKKTHVK 351
Query: 279 KCSANPIFNEDFFFD 293
KC+ NPIFNE F +D
Sbjct: 352 KCTLNPIFNESFIYD 366
Score = 36.2 bits (82), Expect = 0.046
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 219 GQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRVV 278
G L S +Y L + + A GLP + + G + + + P R R + +RV+
Sbjct: 159 GSLTFSVDYNFPKKALVVTIQEAHGLPVMDDQ--TQGSDPYIKMTILPDKRHRVK-TRVL 215
Query: 279 KCSANPIFNEDFFFDGLGPPDLAARSLRAKVL--DRGAGLRRDVLLGECETPLIALLPPL 336
+ + +P+F+E F F G+ L L VL DR RD ++GE PL + P
Sbjct: 216 RKTLDPVFDETFTFYGIPYSQLQDLVLHFLVLSFDR---FSRDDVIGEVMVPLAGVDPST 272
Query: 337 G 337
G
Sbjct: 273 G 273
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 41.2 bits (95), Expect = 0.001
Identities = 50/158 (31%), Positives = 56/158 (35%), Gaps = 14/158 (8%)
Query: 96 ESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPR 155
E+P R +S P P GG A SR H P LRL A S S DS GS
Sbjct: 882 EAPREGRAQSC--SPCRGPEGGRREAGSRAH---PLLRLKAAHAS---LSNDSLNSGSAS 933
Query: 156 PGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLG 215
G R P L+ A S R G P P LD CQ P
Sbjct: 934 DGYCPREHMLPCPLA------ALASRREDPRCGQPRPSRLDLDLPGCQAEPPAREATSAD 987
Query: 216 PRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGS 253
R ++LS YQ P AE L P PG+
Sbjct: 988 ARVRTIKLSPTYQHVPLLEGASRAGAEPLAGPGISPGA 1025
Score = 36.6 bits (83), Expect = 0.035
Identities = 55/209 (26%), Positives = 74/209 (35%), Gaps = 42/209 (20%)
Query: 13 AAEPAARWAPSGLFSKRRAPGPPTSACPNV-------------LTPDRIPQFFIPPR--- 56
A++P R P + PGP S P +P RIP P R
Sbjct: 1882 ASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARRGP 1941
Query: 57 ------LPDPGG-------AVPAARRHVAG--RGLPATCSLPHLAGREGW----AFLPES 97
+P+PG A P AR G R A S + R G+ F+ ES
Sbjct: 1942 PPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIKES 2001
Query: 98 PHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPG 157
P RRR S A + A+ R + P + LC S ++P P P
Sbjct: 2002 PGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLC----SSRCEELRAAPRQGPAPA 2057
Query: 158 LGRRRVSRPHSLSPEKASSADTSPHSPRR 186
R +RP SP + + T+ SP R
Sbjct: 2058 RQRPPAARP---SPGERPARRTTSESPSR 2083
Score = 33.9 bits (76), Expect = 0.23
Identities = 42/151 (27%), Positives = 57/151 (37%), Gaps = 27/151 (17%)
Query: 110 PPPAPAG------GLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSS-----PFGSPRPGL 158
P P P G G A RL + +R+ A S + SS S F PGL
Sbjct: 1949 PEPGPRGRAGTEAGPGARGGRLGL----VRVASALSSGSESSDRSGFRRQLTFIKESPGL 2004
Query: 159 GRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLR--------PTRES 210
RRR LS +++++ SPRR P P +F C +LR P R+
Sbjct: 2005 RRRR----SELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQR 2060
Query: 211 VLRLGPRGGQLRLSTEYQAGPGRLRLRLVSA 241
P G+ P RL +R +A
Sbjct: 2061 PPAARPSPGERPARRTTSESPSRLPVRAPAA 2091
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/180 (28%), Positives = 66/180 (36%), Gaps = 30/180 (16%)
Query: 96 ESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDL-----------RLCRAP------ 138
+ PHT+ ++ P P A G P +AP L CR P
Sbjct: 775 QRPHTQAQDGAVVSPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELL 834
Query: 139 DSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLD 198
D+ ++SS S P SP PG + PE A++A S S G HL
Sbjct: 835 DAASSSSSSSCPPCSPEPG--------REAPGPEPAAAAVGSSMS----GEGRSEKGHLY 882
Query: 199 FLCCQLRPTRESVLRLGPRGGQLRLSTEYQAG-PGRLRLRLVSAEGLPRPRSRPGSGGGG 257
C++ S L+ G + R E Q G P R R R VS G R G GG
Sbjct: 883 CPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGRGG 942
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 40.8 bits (94), Expect = 0.002
Identities = 69/241 (28%), Positives = 86/241 (35%), Gaps = 40/241 (16%)
Query: 109 GPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHS 168
G PP AG PA +S + P R R + + P+ S RPG G R
Sbjct: 61 GRPPTRAG--PAQRSSC--TQPHRRRRRGTRRLPPALTPAGPYHSARPGGGAR------- 109
Query: 169 LSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQ 228
A +A R PPTPP LD PT + R LRLST +
Sbjct: 110 -----ARAA--------RVSPPTPPRSGLD--PAVPSPTPAPLARCRQTRAGLRLSTGGR 154
Query: 229 AGPGRLRLRLVSAEGLPRPRSR-----PGSGGGGCCVVL---RLRPRVRPREQQSRVVKC 280
P LR ++ RP G G GG V RLRPR R R + R C
Sbjct: 155 LSP---PLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRT--C 209
Query: 281 SANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLGGGL 340
A ED P R++ + + + G R G C P + GGG
Sbjct: 210 PARRRGEEDLRVQD-SCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGS 268
Query: 341 G 341
G
Sbjct: 269 G 269
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/180 (28%), Positives = 66/180 (36%), Gaps = 30/180 (16%)
Query: 96 ESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDL-----------RLCRAP------ 138
+ PHT+ ++ P P A G P +AP L CR P
Sbjct: 775 QRPHTQAQDGAVVSPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELL 834
Query: 139 DSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLD 198
D+ ++SS S P SP PG + PE A++A S S G HL
Sbjct: 835 DAASSSSSSSCPPCSPEPG--------REAPGPEPAAAAVGSSMS----GEGRSEKGHLY 882
Query: 199 FLCCQLRPTRESVLRLGPRGGQLRLSTEYQAG-PGRLRLRLVSAEGLPRPRSRPGSGGGG 257
C++ S L+ G + R E Q G P R R R VS G R G GG
Sbjct: 883 CPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGRGG 942
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 40.8 bits (94), Expect = 0.002
Identities = 69/241 (28%), Positives = 86/241 (35%), Gaps = 40/241 (16%)
Query: 109 GPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHS 168
G PP AG PA +S + P R R + + P+ S RPG G R
Sbjct: 61 GRPPTRAG--PAQRSSC--TQPHRRRRRGTRRLPPALTPAGPYHSARPGGGAR------- 109
Query: 169 LSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQ 228
A +A R PPTPP LD PT + R LRLST +
Sbjct: 110 -----ARAA--------RVSPPTPPRSGLD--PAVPSPTPAPLARCRQTRAGLRLSTGGR 154
Query: 229 AGPGRLRLRLVSAEGLPRPRSR-----PGSGGGGCCVVL---RLRPRVRPREQQSRVVKC 280
P LR ++ RP G G GG V RLRPR R R + R C
Sbjct: 155 LSP---PLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRT--C 209
Query: 281 SANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLGGGL 340
A ED P R++ + + + G R G C P + GGG
Sbjct: 210 PARRRGEEDLRVQD-SCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGS 268
Query: 341 G 341
G
Sbjct: 269 G 269
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/180 (28%), Positives = 66/180 (36%), Gaps = 30/180 (16%)
Query: 96 ESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDL-----------RLCRAP------ 138
+ PHT+ ++ P P A G P +AP L CR P
Sbjct: 775 QRPHTQAQDGAVVSPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELL 834
Query: 139 DSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLD 198
D+ ++SS S P SP PG + PE A++A S S G HL
Sbjct: 835 DAASSSSSSSCPPCSPEPG--------REAPGPEPAAAAVGSSMS----GEGRSEKGHLY 882
Query: 199 FLCCQLRPTRESVLRLGPRGGQLRLSTEYQAG-PGRLRLRLVSAEGLPRPRSRPGSGGGG 257
C++ S L+ G + R E Q G P R R R VS G R G GG
Sbjct: 883 CPTCKVTVNSASQLQAHNTGAKHRWMMEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGRGG 942
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 40.8 bits (94), Expect = 0.002
Identities = 51/168 (30%), Positives = 65/168 (38%), Gaps = 23/168 (13%)
Query: 43 LTPDRIPQFFIPPRLPDPGGAVPAARRHVAGRGLPATCSLPHLAGREGWA-------FLP 95
+ PDR P+ P LP PGGA R L A+ + G + + P
Sbjct: 285 VAPDRGPEPGPPAPLPPPGGARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEP 344
Query: 96 ESPHTRRRE--SLFHGPP-PAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSP-- 150
ES T R E S GPP P P GG + AP C AP +D A +P
Sbjct: 345 ESAPTLRVEPPSPPEGPPNPGPDGGKQDGE------APPAGPC-APATDKAEEVVCAPED 397
Query: 151 FGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGP----PTPPL 194
SP P + P P S A ++ P R+ P PTPP+
Sbjct: 398 VASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEAEPTPPV 445
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,283,860
Number of Sequences: 37866
Number of extensions: 1350297
Number of successful extensions: 7842
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 657
Number of HSP's that attempted gapping in prelim test: 6589
Number of HSP's gapped (non-prelim): 1765
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.