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Search of human proteins with 209571515
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209571515 urotensin 2 domain containing [Homo sapiens]
(119 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209571515 urotensin 2 domain containing [Homo sapiens] 243 3e-65
gi|21264332 sialyltransferase 7A [Homo sapiens] 32 0.085
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 31 0.19
gi|15451910 caspase 4 isoform gamma precursor [Homo sapiens] 29 0.94
gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens] 29 0.94
gi|23308697 signal recognition particle receptor [Homo sapiens] 29 0.94
gi|103472033 fucosyltransferase 6 [Homo sapiens] 28 1.2
gi|4503815 fucosyltransferase 6 [Homo sapiens] 28 1.2
gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclea... 28 1.6
gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease... 28 1.6
gi|52426743 cisplatin resistance-associated overexpressed protei... 28 1.6
gi|19923485 cisplatin resistance-associated overexpressed protei... 28 1.6
gi|153792086 FtsJ methyltransferase domain containing 1 [Homo sa... 28 2.1
gi|153791865 FtsJ methyltransferase domain containing 1 [Homo sa... 28 2.1
gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] 28 2.1
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 27 2.7
gi|157388919 homolog of yeast tRNA methyltransferase 12 [Homo sa... 27 2.7
gi|148491106 zinc finger protein 295 isoform S [Homo sapiens] 27 2.7
gi|148491088 zinc finger protein 295 isoform L [Homo sapiens] 27 2.7
gi|50345873 zinc finger protein 295 isoform L [Homo sapiens] 27 2.7
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 27 3.6
gi|21955174 kinesin family member C2 [Homo sapiens] 27 3.6
gi|13236565 centromere protein O [Homo sapiens] 27 4.7
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 26 6.1
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 26 6.1
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 26 6.1
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 26 6.1
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 26 6.1
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 26 6.1
gi|45446749 kinesin family member 5A [Homo sapiens] 26 6.1
>gi|209571515 urotensin 2 domain containing [Homo sapiens]
Length = 119
Score = 243 bits (619), Expect = 3e-65
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MNKILSSTVCFGLLTLLSVLSFLQSVHGRPYLTQGNEIFPDKKYTNREELLLALLNKNFD 60
MNKILSSTVCFGLLTLLSVLSFLQSVHGRPYLTQGNEIFPDKKYTNREELLLALLNKNFD
Sbjct: 1 MNKILSSTVCFGLLTLLSVLSFLQSVHGRPYLTQGNEIFPDKKYTNREELLLALLNKNFD 60
Query: 61 FQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSETSYAVDGLFSSHPSKRACFWKYCV 119
FQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSETSYAVDGLFSSHPSKRACFWKYCV
Sbjct: 61 FQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSETSYAVDGLFSSHPSKRACFWKYCV 119
>gi|21264332 sialyltransferase 7A [Homo sapiens]
Length = 600
Score = 32.3 bits (72), Expect = 0.085
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 12 GLLTLLSVLSFLQSVHGRPYLTQGNEIFPDKKYTNREELLLALLNKNFDFQR 63
G L LL+ L V ++T+G+E F D Y + L+ +N +F +R
Sbjct: 522 GALLLLTALQLCDQVSAYGFITEGHERFSDHYYDTSWKRLIFYINHDFKLER 573
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 45 TNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSE 95
T + E AL+ +N+ +R N +A P++ E++ + E+ K + E+K+ E
Sbjct: 481 TKKNENYKALVRRNYGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEE 531
>gi|15451910 caspase 4 isoform gamma precursor [Homo sapiens]
Length = 321
Score = 28.9 bits (63), Expect = 0.94
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 34 QGNEIFPDKKYTNREELLLALLNKNFDFQRPFN-TDLALPNKLEELNQLEKL--KEQLVE 90
+ EI+P K+ NR L L + N FD P N D + E L L+ E+ +
Sbjct: 65 RAEEIYPIKERNNRTRLALIICNTEFDHLPPRNGADFDITGMKELLEGLDYSVDVEENLT 124
Query: 91 EKDSETSYAVDGLFSSHPSKRACF 114
+D E++ H S + F
Sbjct: 125 ARDMESALRAFATRPEHKSSDSTF 148
>gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens]
Length = 377
Score = 28.9 bits (63), Expect = 0.94
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 34 QGNEIFPDKKYTNREELLLALLNKNFDFQRPFN-TDLALPNKLEELNQLEKL--KEQLVE 90
+ EI+P K+ NR L L + N FD P N D + E L L+ E+ +
Sbjct: 121 RAEEIYPIKERNNRTRLALIICNTEFDHLPPRNGADFDITGMKELLEGLDYSVDVEENLT 180
Query: 91 EKDSETSYAVDGLFSSHPSKRACF 114
+D E++ H S + F
Sbjct: 181 ARDMESALRAFATRPEHKSSDSTF 204
>gi|23308697 signal recognition particle receptor [Homo sapiens]
Length = 638
Score = 28.9 bits (63), Expect = 0.94
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 19/84 (22%)
Query: 13 LLTLLSVLSFLQSVHGRPYLTQGNEIFPDKKYTN-REELLLALLNKNFDFQRPF------ 65
+LTL V + VH +F DK T +++ L+LLN FDFQ F
Sbjct: 73 ILTLTYVDKLIDDVH---------RLFRDKYRTEIQQQSALSLLNGTFDFQNDFLRLLRE 123
Query: 66 ---NTDLALPNKLEELNQLEKLKE 86
++ + P +++ EK K+
Sbjct: 124 AEESSKIRAPTTMKKFEDSEKAKK 147
>gi|103472033 fucosyltransferase 6 [Homo sapiens]
Length = 359
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 7 STVCFGLLTLLSVLSFLQSVHGRPYLTQGNEIFPDKKYTNREELLLALLNKNFDFQRPFN 66
+T+ F LL + S+L+ P + FPD T + L LL + PFN
Sbjct: 18 TTLLFQLLMAVCFFSYLRVSQDDPTVYPNGSRFPDSTGTPAHSIPLILL-----WTWPFN 72
Query: 67 TDLALP 72
+ALP
Sbjct: 73 KPIALP 78
>gi|4503815 fucosyltransferase 6 [Homo sapiens]
Length = 359
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 7 STVCFGLLTLLSVLSFLQSVHGRPYLTQGNEIFPDKKYTNREELLLALLNKNFDFQRPFN 66
+T+ F LL + S+L+ P + FPD T + L LL + PFN
Sbjct: 18 TTLLFQLLMAVCFFSYLRVSQDDPTVYPNGSRFPDSTGTPAHSIPLILL-----WTWPFN 72
Query: 67 TDLALP 72
+ALP
Sbjct: 73 KPIALP 78
>gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 2 [Homo sapiens]
Length = 578
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 36 NEIFPDKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSE 95
N PD K+ + + L ++ FDF + F + N+ EE +L+EQ E++
Sbjct: 37 NRSSPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEE----RQLREQYDEKRSQA 92
Query: 96 TSYAVDGLFSSHPSK 110
S + SK
Sbjct: 93 NGAGALSYVSPNTSK 107
>gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 1 [Homo sapiens]
Length = 639
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 36 NEIFPDKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSE 95
N PD K+ + + L ++ FDF + F + N+ EE +L+EQ E++
Sbjct: 98 NRSSPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEE----RQLREQYDEKRSQA 153
Query: 96 TSYAVDGLFSSHPSK 110
S + SK
Sbjct: 154 NGAGALSYVSPNTSK 168
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Query: 27 HGRPYLTQGNEIFPDKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKE 86
H R L+Q + T + E + +L D +L K+EE + KL E
Sbjct: 104 HARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVE 163
Query: 87 QLVEEKD--SETSYAVDGLFSSHPSKRAC 113
QL EE++ T+ ++ + C
Sbjct: 164 QLKEERELLRSTTSTIESFAAQEKQMEVC 192
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Query: 27 HGRPYLTQGNEIFPDKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKE 86
H R L+Q + T + E + +L D +L K+EE + KL E
Sbjct: 104 HARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVE 163
Query: 87 QLVEEKD--SETSYAVDGLFSSHPSKRAC 113
QL EE++ T+ ++ + C
Sbjct: 164 QLKEERELLRSTTSTIESFAAQEKQMEVC 192
>gi|153792086 FtsJ methyltransferase domain containing 1 [Homo
sapiens]
Length = 770
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 51 LLALLNKNFDFQRPFNTDLALPNKLE-------ELNQLEKLKEQLVEEKD 93
+ L KNF + +P N + LP+ E ELN LK L E K+
Sbjct: 26 IFELFAKNFSYGKPLNNEWQLPDPSEIFTCDHTELNAFLDLKNSLNEVKN 75
>gi|153791865 FtsJ methyltransferase domain containing 1 [Homo
sapiens]
Length = 770
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 51 LLALLNKNFDFQRPFNTDLALPNKLE-------ELNQLEKLKEQLVEEKD 93
+ L KNF + +P N + LP+ E ELN LK L E K+
Sbjct: 26 IFELFAKNFSYGKPLNNEWQLPDPSEIFTCDHTELNAFLDLKNSLNEVKN 75
>gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]
Length = 1044
Score = 27.7 bits (60), Expect = 2.1
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 61 FQRPFNTDLALPNKLEELNQLEKLKEQLVE----EKDSETSYAVDGLFSSHPSKRA 112
FQ P N +L L +++ L+ L K K ++ E E++ E ++D L P+K A
Sbjct: 36 FQSPGNLELPLLHRVAFLDHLCKQKSEVEEEGEEEEEGEDEASLDPLKPCSPTKEA 91
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 47 REELLLALLNKNFDFQRPFNTDLALPNKLEELNQ-LEKLKEQLVEEKDSETSYAV 100
R++++LAL K + N L +K NQ LE+L+ L+E +DS T A+
Sbjct: 1546 RDQVMLALKQKQMENTALQNEVQRLRDKEFRSNQELERLRNHLLESEDSYTREAL 1600
>gi|157388919 homolog of yeast tRNA methyltransferase 12 [Homo
sapiens]
Length = 448
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 19 VLSFLQSVHGRPYLTQGNEIFPDKKY 44
+ + LQ VHG+P+ TQ I P K Y
Sbjct: 403 IATLLQQVHGKPWKTQILHIQPVKSY 428
>gi|148491106 zinc finger protein 295 isoform S [Homo sapiens]
Length = 865
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 71 LPNKLEELNQLE-KLKEQLVEEKDSETSYAVDGLFSSHPSKRACFW 115
LP L QL+ ++KE+ VEE + E A + PSK A W
Sbjct: 663 LPEDLSLSKQLKIQVKEEPVEEAEEEAPEASTAPKEAGPSKEASLW 708
>gi|148491088 zinc finger protein 295 isoform L [Homo sapiens]
Length = 1066
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 71 LPNKLEELNQLE-KLKEQLVEEKDSETSYAVDGLFSSHPSKRACFW 115
LP L QL+ ++KE+ VEE + E A + PSK A W
Sbjct: 864 LPEDLSLSKQLKIQVKEEPVEEAEEEAPEASTAPKEAGPSKEASLW 909
>gi|50345873 zinc finger protein 295 isoform L [Homo sapiens]
Length = 1066
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 71 LPNKLEELNQLE-KLKEQLVEEKDSETSYAVDGLFSSHPSKRACFW 115
LP L QL+ ++KE+ VEE + E A + PSK A W
Sbjct: 864 LPEDLSLSKQLKIQVKEEPVEEAEEEAPEASTAPKEAGPSKEASLW 909
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 26.9 bits (58), Expect = 3.6
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 42 KKYTNREELLLALLNKNFDFQRPFNTDLA-LPNKLEELN-QLEKLKEQLVEEKDSETSYA 99
++ T ++ + +L N R +D+A L N+ EELN +L+ ++EQL KD E S A
Sbjct: 959 QELTEKDATIASLEETN----RTLTSDVANLANEKEELNNKLKDVQEQLSRLKDEEISAA 1014
>gi|21955174 kinesin family member C2 [Homo sapiens]
Length = 838
Score = 26.9 bits (58), Expect = 3.6
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 16 LLSVLSFLQSVHGRPYLTQGNEIFPDKK------YTNREELLLAL-------LNKNFDFQ 62
LL++L++L+S GR L QG + P + T++EE L Q
Sbjct: 124 LLALLAWLRSPRGRQALLQGTQPAPRVRPPSPDGSTSQEESPSHFTAVPGEPLGDETQGQ 183
Query: 63 RP--FNTDLALPNKLEE--LNQLEKLKEQLVEEKDSETSYAVDGLFSSHPSKR 111
+P D +LE+ L QLE+LK+QL E+++ E G+ ++ KR
Sbjct: 184 QPLQLEEDQRAWQRLEQLILGQLEELKQQL-EQQEEELGRLRLGVGATDSEKR 235
>gi|13236565 centromere protein O [Homo sapiens]
Length = 300
Score = 26.6 bits (57), Expect = 4.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 72 PNKLEELNQLEKLKEQLVEEKDSETSYAVDGLFSSHPSKRAC 113
PN+ E+N+ E L+E+L K +Y GL S+ C
Sbjct: 82 PNQTVEINEQEALEEKLENVKAILQAYHFTGLSGKLTSRGVC 123
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 41 DKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSETSYAV 100
+K T EE L K +F+ + A +++QLE K +L + +S++ +
Sbjct: 858 EKVQTRLEETQALLRKKEKEFEETMDALQA------DIDQLEAEKAELKQRLNSQSKRTI 911
Query: 101 DGLFSSHPS 109
+GL PS
Sbjct: 912 EGLRGPPPS 920
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 41 DKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSETSYAV 100
+K T EE L K +F+ + A +++QLE K +L + +S++ +
Sbjct: 972 EKVQTRLEETQALLRKKEKEFEETMDALQA------DIDQLEAEKAELKQRLNSQSKRTI 1025
Query: 101 DGLFSSHPS 109
+GL PS
Sbjct: 1026 EGLRGPPPS 1034
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 41 DKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSETSYAV 100
+K T EE L K +F+ + A +++QLE K +L + +S++ +
Sbjct: 858 EKVQTRLEETQALLRKKEKEFEETMDALQA------DIDQLEAEKAELKQRLNSQSKRTI 911
Query: 101 DGLFSSHPS 109
+GL PS
Sbjct: 912 EGLRGPPPS 920
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 41 DKKYTNREELLLALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSETSYAV 100
+K T EE L K +F+ + A +++QLE K +L + +S++ +
Sbjct: 992 EKVQTRLEETQALLRKKEKEFEETMDALQA------DIDQLEAEKAELKQRLNSQSKRTI 1045
Query: 101 DGLFSSHPS 109
+GL PS
Sbjct: 1046 EGLRGPPPS 1054
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 26.2 bits (56), Expect = 6.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 53 ALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSE 95
AL+ DF T P+ EE ++K+ + L E+KDS+
Sbjct: 131 ALIKLQADFASCTATHRYPPSSSEECEDIKKILKHLQEQKDSQ 173
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 26.2 bits (56), Expect = 6.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 53 ALLNKNFDFQRPFNTDLALPNKLEELNQLEKLKEQLVEEKDSE 95
AL+ DF T P+ EE ++K+ + L E+KDS+
Sbjct: 276 ALIKLQADFASCTATHRYPPSSSEECEDIKKILKHLQEQKDSQ 318
>gi|45446749 kinesin family member 5A [Homo sapiens]
Length = 1032
Score = 26.2 bits (56), Expect = 6.1
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 46 NREELLLALLNKNFDFQRPFN-----TDLALPNKLEELNQLEKL------KEQLVEEKDS 94
++EELL++ N QR + D A E L LE+L K Q VEEK
Sbjct: 451 DQEELLVSTRGDNEKVQRELSHLQSENDAAKDEVKEVLQALEELAVNYDQKSQEVEEKSQ 510
Query: 95 ETSYAVDGL 103
+ VD L
Sbjct: 511 QNQLLVDEL 519
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,352,523
Number of Sequences: 37866
Number of extensions: 177679
Number of successful extensions: 866
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 849
Number of HSP's gapped (non-prelim): 42
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.