SSPN 12348

Name: SSPN	Sequence: fasta or formatted (140aa)		NCBI GI: 209529678
Description: sarcospan isoform 2		Referenced in: Muscle
Other entries for this name: alt prot [243aa] sarcospan isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 7 2 C cysteine 7.9 11 1 D aspartate 2.9 4 1 E glutamate 2.9 4 1 F phenylalanine 6.4 9 1 G glycine 3.6 5 1 H histidine 2.1 3 2 I isoleucine 3.6 5 1 K lysine 3.6 5 1 L leucine 15.0 21 2 M methionine 2.9 4 1 N asparagine 0.7 1 1 P proline 2.1 3 1 Q glutamine 6.4 9 2 R arginine 3.6 5 1 S serine 7.9 11 2 T threonine 8.6 12 2 V valine 10.0 14 1 W tryptophan 0.7 1 1 Y tyrosine 4.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sarcospan isoform 2 SSPN 1.000 sarcospan isoform 1 MS4A6A 0.015 membrane-spanning 4-domains, subfamily A, member 6A ... MS4A6A 0.015 membrane-spanning 4-domains, subfamily A, member 6A ... PPAPDC1A 0.011 phosphatidic acid phosphatase type 2 domain containi... NPFFR1 0.011 neuropeptide FF receptor 1 LPPR4 0.008 plasticity related gene 1 DMXL2 0.004 Dmx-like 2 OR4F3 0.004 olfactory receptor, family 4, subfamily F, member 3 ... OR4F29 0.004 olfactory receptor, family 4, subfamily F, member 2... OR4F16 0.004 olfactory receptor, family 4, subfamily F, member 16... SMOC1 0.004 secreted modular calcium-binding protein 1 isoform 1... ZNFX1 0.004 zinc finger, NFX1-type containing 1 SMOC1 0.004 secreted modular calcium-binding protein 1 isoform 2... OR4F21 0.004 olfactory receptor, family 4, subfamily F, member 21... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.