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Search of human proteins with 209447096
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209447096 transmembrane protein 2 isoform b [Homo sapiens]
(1320 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209447096 transmembrane protein 2 isoform b [Homo sapiens] 2705 0.0
gi|7019555 transmembrane protein 2 isoform a [Homo sapiens] 2650 0.0
gi|38638698 KIAA1199 [Homo sapiens] 830 0.0
gi|126116589 fibrocystin L [Homo sapiens] 143 1e-33
gi|126131104 fibrocystin isoform 2 [Homo sapiens] 65 3e-10
gi|126131102 fibrocystin isoform 1 [Homo sapiens] 65 3e-10
gi|210147552 O-linked mannose beta1,2-N-acetylglucosaminyltransf... 49 2e-05
gi|20270363 family with sequence similarity 3, member D [Homo sa... 44 0.001
gi|13324682 family 3, member A protein [Homo sapiens] 42 0.003
gi|91807125 family with sequence similarity 3, member C precurso... 42 0.005
gi|7661714 family with sequence similarity 3, member C precursor... 42 0.005
gi|46255032 family with sequence similarity 3, member B isoform ... 37 0.096
gi|46255030 family with sequence similarity 3, member B isoform ... 37 0.096
gi|29294649 dicer1 [Homo sapiens] 32 3.1
gi|29294651 dicer1 [Homo sapiens] 32 3.1
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 32 4.0
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 32 5.3
gi|62422571 collapsin response mediator protein 1 isoform 1 [Hom... 31 6.9
gi|4503051 collapsin response mediator protein 1 isoform 2 [Homo... 31 6.9
gi|21493039 A-kinase anchor protein 4 isoform 2 [Homo sapiens] 31 9.0
gi|21493037 A-kinase anchor protein 4 isoform 1 [Homo sapiens] 31 9.0
>gi|209447096 transmembrane protein 2 isoform b [Homo sapiens]
Length = 1320
Score = 2705 bits (7011), Expect = 0.0
Identities = 1320/1320 (100%), Positives = 1320/1320 (100%)
Query: 1 MYATDSRGHSPAFLQPQNGNSRHPSGYVPGKVVPLRPPPPPKSQASAKFTSIRREDRATF 60
MYATDSRGHSPAFLQPQNGNSRHPSGYVPGKVVPLRPPPPPKSQASAKFTSIRREDRATF
Sbjct: 1 MYATDSRGHSPAFLQPQNGNSRHPSGYVPGKVVPLRPPPPPKSQASAKFTSIRREDRATF 60
Query: 61 AFSPEEQQAQRESQKQKRHKNTFICFAITSFSFFIALAIILGISSKYAPDENCPDQNPRL 120
AFSPEEQQAQRESQKQKRHKNTFICFAITSFSFFIALAIILGISSKYAPDENCPDQNPRL
Sbjct: 61 AFSPEEQQAQRESQKQKRHKNTFICFAITSFSFFIALAIILGISSKYAPDENCPDQNPRL 120
Query: 121 RNWDPGQDSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYIL 180
RNWDPGQDSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYIL
Sbjct: 121 RNWDPGQDSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYIL 180
Query: 181 IQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGARKASW 240
IQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGARKASW
Sbjct: 181 IQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGARKASW 240
Query: 241 TLLARTLNSSGLPFGSYTFEKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEF 300
TLLARTLNSSGLPFGSYTFEKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEF
Sbjct: 241 TLLARTLNSSGLPFGSYTFEKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEF 300
Query: 301 LRFQDPGRIVAIAVGDSAAKSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTS 360
LRFQDPGRIVAIAVGDSAAKSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTS
Sbjct: 301 LRFQDPGRIVAIAVGDSAAKSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTS 360
Query: 361 CNESVRNYENHSSGGKALAQREFYTVDGQKFSVTAYSEWIEETPQFLHMGEIIDGVDMRA 420
CNESVRNYENHSSGGKALAQREFYTVDGQKFSVTAYSEWIEETPQFLHMGEIIDGVDMRA
Sbjct: 361 CNESVRNYENHSSGGKALAQREFYTVDGQKFSVTAYSEWIEETPQFLHMGEIIDGVDMRA 420
Query: 421 EVGILTRNIVIQGEVEDSCYAENQCQFFDYDTFGGHIMIMKNFTSVHLSYVELKHMGQQQ 480
EVGILTRNIVIQGEVEDSCYAENQCQFFDYDTFGGHIMIMKNFTSVHLSYVELKHMGQQQ
Sbjct: 421 EVGILTRNIVIQGEVEDSCYAENQCQFFDYDTFGGHIMIMKNFTSVHLSYVELKHMGQQQ 480
Query: 481 MGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTNGLLIKDTIGFDTLGH 540
MGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTNGLLIKDTIGFDTLGH
Sbjct: 481 MGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTNGLLIKDTIGFDTLGH 540
Query: 541 CFFLEDGIEQRNTLFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVFGNYIPVPATDCMAVS 600
CFFLEDGIEQRNTLFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVFGNYIPVPATDCMAVS
Sbjct: 541 CFFLEDGIEQRNTLFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVFGNYIPVPATDCMAVS 600
Query: 601 TFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTGESSGLQLLAKPELTPLGIFYNNRVHS 660
TFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTGESSGLQLLAKPELTPLGIFYNNRVHS
Sbjct: 601 TFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTGESSGLQLLAKPELTPLGIFYNNRVHS 660
Query: 661 NFKAGLFIDKGVKTTNSSAADPREYLCLDNSARFRPHQDANPEKPRVAALIDRLIAFKNN 720
NFKAGLFIDKGVKTTNSSAADPREYLCLDNSARFRPHQDANPEKPRVAALIDRLIAFKNN
Sbjct: 661 NFKAGLFIDKGVKTTNSSAADPREYLCLDNSARFRPHQDANPEKPRVAALIDRLIAFKNN 720
Query: 721 DNGAWVRGGDIIVQNSAFADNGIGLTFASDGSFPSDEGSSQEVSESLFVGESRNYGFQGG 780
DNGAWVRGGDIIVQNSAFADNGIGLTFASDGSFPSDEGSSQEVSESLFVGESRNYGFQGG
Sbjct: 721 DNGAWVRGGDIIVQNSAFADNGIGLTFASDGSFPSDEGSSQEVSESLFVGESRNYGFQGG 780
Query: 781 QNKYVGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTRSTFKKYVPTPDRYSSAIGFLM 840
QNKYVGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTRSTFKKYVPTPDRYSSAIGFLM
Sbjct: 781 QNKYVGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTRSTFKKYVPTPDRYSSAIGFLM 840
Query: 841 KNSWQITPRNNISLVKFGPHVSLNVFFGKPGPWFEDCEMDGDKNSIFHDIDGSVTGYKDA 900
KNSWQITPRNNISLVKFGPHVSLNVFFGKPGPWFEDCEMDGDKNSIFHDIDGSVTGYKDA
Sbjct: 841 KNSWQITPRNNISLVKFGPHVSLNVFFGKPGPWFEDCEMDGDKNSIFHDIDGSVTGYKDA 900
Query: 901 YVGRMDNYLIRHPSCVNVSKWNAVICSGTYAQVYVQTWSTQNLSMTITRDEYPSNPMVLR 960
YVGRMDNYLIRHPSCVNVSKWNAVICSGTYAQVYVQTWSTQNLSMTITRDEYPSNPMVLR
Sbjct: 901 YVGRMDNYLIRHPSCVNVSKWNAVICSGTYAQVYVQTWSTQNLSMTITRDEYPSNPMVLR 960
Query: 961 GINQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKNDWIRVGLCYPSNTSFQV 1020
GINQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKNDWIRVGLCYPSNTSFQV
Sbjct: 961 GINQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKNDWIRVGLCYPSNTSFQV 1020
Query: 1021 TFGYLQRQNGSLSKIEEYEPVHSLEELQRKQSERKFYFDSSTGLLFLYLKAKSHRHGHSY 1080
TFGYLQRQNGSLSKIEEYEPVHSLEELQRKQSERKFYFDSSTGLLFLYLKAKSHRHGHSY
Sbjct: 1021 TFGYLQRQNGSLSKIEEYEPVHSLEELQRKQSERKFYFDSSTGLLFLYLKAKSHRHGHSY 1080
Query: 1081 CSSQGCERVKIQAATDSKDISNCMAKAYPQYYRKPSVVKRMPAMLTGLCQGCGTRQVVFT 1140
CSSQGCERVKIQAATDSKDISNCMAKAYPQYYRKPSVVKRMPAMLTGLCQGCGTRQVVFT
Sbjct: 1081 CSSQGCERVKIQAATDSKDISNCMAKAYPQYYRKPSVVKRMPAMLTGLCQGCGTRQVVFT 1140
Query: 1141 SDPHKSYLPVQFQSPDKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDPCSVPFRLTEKT 1200
SDPHKSYLPVQFQSPDKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDPCSVPFRLTEKT
Sbjct: 1141 SDPHKSYLPVQFQSPDKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDPCSVPFRLTEKT 1200
Query: 1201 VFPLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGSTIF 1260
VFPLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGSTIF
Sbjct: 1201 VFPLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGSTIF 1260
Query: 1261 LGFSGNFKPSWTKLFTSPAGQGLGVLEQFIPLQLDEYGCPRATTVRRRDLELLKQASKAH 1320
LGFSGNFKPSWTKLFTSPAGQGLGVLEQFIPLQLDEYGCPRATTVRRRDLELLKQASKAH
Sbjct: 1261 LGFSGNFKPSWTKLFTSPAGQGLGVLEQFIPLQLDEYGCPRATTVRRRDLELLKQASKAH 1320
>gi|7019555 transmembrane protein 2 isoform a [Homo sapiens]
Length = 1383
Score = 2650 bits (6869), Expect = 0.0
Identities = 1311/1383 (94%), Positives = 1316/1383 (95%), Gaps = 63/1383 (4%)
Query: 1 MYATDSRGHSPAFLQPQNGNSRHPSGYVPGKVVPLRPPPPPKSQASAKFTSIRREDRATF 60
MYATDSRGHSPAFLQPQNGNSRHPSGYVPGKVVPLRPPPPPKSQASAKFTSIRREDRATF
Sbjct: 1 MYATDSRGHSPAFLQPQNGNSRHPSGYVPGKVVPLRPPPPPKSQASAKFTSIRREDRATF 60
Query: 61 AFSPEEQQAQRESQKQKRHKNTFICFAITSFSFFIALAIILGISSKYAPDENCPDQNPRL 120
AFSPEEQQAQRESQKQKRHKNTFICFAITSFSFFIALAIILGISSKYAPDENCPDQNPRL
Sbjct: 61 AFSPEEQQAQRESQKQKRHKNTFICFAITSFSFFIALAIILGISSKYAPDENCPDQNPRL 120
Query: 121 RNWDPGQDSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYIL 180
RNWDPGQDSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYIL
Sbjct: 121 RNWDPGQDSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYIL 180
Query: 181 IQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGARKASW 240
IQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGARKASW
Sbjct: 181 IQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGARKASW 240
Query: 241 TLLARTLNSSGLPFGSYTFEKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEF 300
TLLARTLNSSGLPFGSYTFEKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEF
Sbjct: 241 TLLARTLNSSGLPFGSYTFEKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEF 300
Query: 301 LRFQDPGRIVAIAVGDSAAKSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTS 360
LRFQDPGRIVAIAVGDSAAKSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTS
Sbjct: 301 LRFQDPGRIVAIAVGDSAAKSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTS 360
Query: 361 CNESVRNYENHSSGGKALAQREFYT---------------------------VDGQKFSV 393
CNESVRNYENHSSGGKALAQREFYT VDG K ++
Sbjct: 361 CNESVRNYENHSSGGKALAQREFYTVDGQKFSVTAYSEWIEGVSLSGFRVEVVDGVKLNL 420
Query: 394 -----------------TAYSEW-------------------IEETPQFLHMGEIIDGVD 417
T YS + ++ETPQFLHMGEIIDGVD
Sbjct: 421 LDDVSSWKPGDQIVVASTDYSMYQAEEFTLLPCSECSHFQVKVKETPQFLHMGEIIDGVD 480
Query: 418 MRAEVGILTRNIVIQGEVEDSCYAENQCQFFDYDTFGGHIMIMKNFTSVHLSYVELKHMG 477
MRAEVGILTRNIVIQGEVEDSCYAENQCQFFDYDTFGGHIMIMKNFTSVHLSYVELKHMG
Sbjct: 481 MRAEVGILTRNIVIQGEVEDSCYAENQCQFFDYDTFGGHIMIMKNFTSVHLSYVELKHMG 540
Query: 478 QQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTNGLLIKDTIGFDT 537
QQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTNGLLIKDTIGFDT
Sbjct: 541 QQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTNGLLIKDTIGFDT 600
Query: 538 LGHCFFLEDGIEQRNTLFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVFGNYIPVPATDCM 597
LGHCFFLEDGIEQRNTLFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVFGNYIPVPATDCM
Sbjct: 601 LGHCFFLEDGIEQRNTLFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVFGNYIPVPATDCM 660
Query: 598 AVSTFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTGESSGLQLLAKPELTPLGIFYNNR 657
AVSTFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTGESSGLQLLAKPELTPLGIFYNNR
Sbjct: 661 AVSTFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTGESSGLQLLAKPELTPLGIFYNNR 720
Query: 658 VHSNFKAGLFIDKGVKTTNSSAADPREYLCLDNSARFRPHQDANPEKPRVAALIDRLIAF 717
VHSNFKAGLFIDKGVKTTNSSAADPREYLCLDNSARFRPHQDANPEKPRVAALIDRLIAF
Sbjct: 721 VHSNFKAGLFIDKGVKTTNSSAADPREYLCLDNSARFRPHQDANPEKPRVAALIDRLIAF 780
Query: 718 KNNDNGAWVRGGDIIVQNSAFADNGIGLTFASDGSFPSDEGSSQEVSESLFVGESRNYGF 777
KNNDNGAWVRGGDIIVQNSAFADNGIGLTFASDGSFPSDEGSSQEVSESLFVGESRNYGF
Sbjct: 781 KNNDNGAWVRGGDIIVQNSAFADNGIGLTFASDGSFPSDEGSSQEVSESLFVGESRNYGF 840
Query: 778 QGGQNKYVGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTRSTFKKYVPTPDRYSSAIG 837
QGGQNKYVGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTRSTFKKYVPTPDRYSSAIG
Sbjct: 841 QGGQNKYVGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTRSTFKKYVPTPDRYSSAIG 900
Query: 838 FLMKNSWQITPRNNISLVKFGPHVSLNVFFGKPGPWFEDCEMDGDKNSIFHDIDGSVTGY 897
FLMKNSWQITPRNNISLVKFGPHVSLNVFFGKPGPWFEDCEMDGDKNSIFHDIDGSVTGY
Sbjct: 901 FLMKNSWQITPRNNISLVKFGPHVSLNVFFGKPGPWFEDCEMDGDKNSIFHDIDGSVTGY 960
Query: 898 KDAYVGRMDNYLIRHPSCVNVSKWNAVICSGTYAQVYVQTWSTQNLSMTITRDEYPSNPM 957
KDAYVGRMDNYLIRHPSCVNVSKWNAVICSGTYAQVYVQTWSTQNLSMTITRDEYPSNPM
Sbjct: 961 KDAYVGRMDNYLIRHPSCVNVSKWNAVICSGTYAQVYVQTWSTQNLSMTITRDEYPSNPM 1020
Query: 958 VLRGINQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKNDWIRVGLCYPSNTS 1017
VLRGINQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKNDWIRVGLCYPSNTS
Sbjct: 1021 VLRGINQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKNDWIRVGLCYPSNTS 1080
Query: 1018 FQVTFGYLQRQNGSLSKIEEYEPVHSLEELQRKQSERKFYFDSSTGLLFLYLKAKSHRHG 1077
FQVTFGYLQRQNGSLSKIEEYEPVHSLEELQRKQSERKFYFDSSTGLLFLYLKAKSHRHG
Sbjct: 1081 FQVTFGYLQRQNGSLSKIEEYEPVHSLEELQRKQSERKFYFDSSTGLLFLYLKAKSHRHG 1140
Query: 1078 HSYCSSQGCERVKIQAATDSKDISNCMAKAYPQYYRKPSVVKRMPAMLTGLCQGCGTRQV 1137
HSYCSSQGCERVKIQAATDSKDISNCMAKAYPQYYRKPSVVKRMPAMLTGLCQGCGTRQV
Sbjct: 1141 HSYCSSQGCERVKIQAATDSKDISNCMAKAYPQYYRKPSVVKRMPAMLTGLCQGCGTRQV 1200
Query: 1138 VFTSDPHKSYLPVQFQSPDKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDPCSVPFRLT 1197
VFTSDPHKSYLPVQFQSPDKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDPCSVPFRLT
Sbjct: 1201 VFTSDPHKSYLPVQFQSPDKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDPCSVPFRLT 1260
Query: 1198 EKTVFPLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGS 1257
EKTVFPLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGS
Sbjct: 1261 EKTVFPLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGS 1320
Query: 1258 TIFLGFSGNFKPSWTKLFTSPAGQGLGVLEQFIPLQLDEYGCPRATTVRRRDLELLKQAS 1317
TIFLGFSGNFKPSWTKLFTSPAGQGLGVLEQFIPLQLDEYGCPRATTVRRRDLELLKQAS
Sbjct: 1321 TIFLGFSGNFKPSWTKLFTSPAGQGLGVLEQFIPLQLDEYGCPRATTVRRRDLELLKQAS 1380
Query: 1318 KAH 1320
KAH
Sbjct: 1381 KAH 1383
>gi|38638698 KIAA1199 [Homo sapiens]
Length = 1361
Score = 830 bits (2143), Expect = 0.0
Identities = 429/941 (45%), Positives = 594/941 (63%), Gaps = 40/941 (4%)
Query: 359 TSCNESVRNYENHSSGGK-----ALAQREFYTVDGQKFSVTAYSEW------IEETPQFL 407
T+ N ++ N E++ K +A ++ ++F V + P +L
Sbjct: 417 TNVNSTILNLEDNVQSWKPGDTLVIASTDYSMYQAEEFQVLPCRSCAPNQVKVAGKPMYL 476
Query: 408 HMGEIIDGVDMRAEVGILTRNIVIQGEVEDSCYAENQ--CQFFDYDTFGGHIMIMKNFTS 465
H+GE IDGVDMRAEVG+L+RNI++ GE+ED CY C FFD+DTFGGHI F +
Sbjct: 477 HIGEEIDGVDMRAEVGLLSRNIIVMGEMEDKCYPYRNHICNFFDFDTFGGHIKFALGFKA 536
Query: 466 VHLSYVELKHMGQQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTN 525
HL ELKHMGQQ +G+YP+HFHL GDVD +GGY T++ LSIHH+FSRC+TVHG+N
Sbjct: 537 AHLEGTELKHMGQQLVGQYPIHFHLAGDVDERGGYDPPTYIRDLSIHHTFSRCVTVHGSN 596
Query: 526 GLLIKDTIGFDTLGHCFFLEDGIEQRNTLFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVF 585
GLLIKD +G+++LGHCFF EDG E+RNT H LGLL K GTLLP+DR++ MC + + +
Sbjct: 597 GLLIKDVVGYNSLGHCFFTEDGPEERNTFDHCLGLLVKSGTLLPSDRDSKMCKMITEDSY 656
Query: 586 GNYIPVPATDCMAVSTFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTGESSGLQLLAKP 645
YIP P DC AVSTFW+A+PNNNLIN AAAGS++ G W++FH PTG S G+
Sbjct: 657 PGYIPKPRQDCNAVSTFWMANPNNNLINCAAAGSEETGFWFIFHHVPTGPSVGMYSPGYS 716
Query: 646 ELTPLGIFYNNRVHSNFKAGLFIDKGVKTTNSSAADPREYLCLDNSARFRPHQDANPEKP 705
E PLG FYNNR HSN++AG+ ID GVKTT +SA D R +L + SAR+ PHQDA+P KP
Sbjct: 717 EHIPLGKFYNNRAHSNYRAGMIIDNGVKTTEASAKDKRPFLSI-ISARYSPHQDADPLKP 775
Query: 706 RVAALIDRLIAFKNNDNGAWVRGGDIIVQNSAFADNGIGLTFASDGSFPSDEGSSQEVSE 765
R A+I IA+KN D+GAW+RGGD+ + + FADNGIGLT AS G+FP D+GS QE+
Sbjct: 776 REPAIIRHFIAYKNQDHGAWLRGGDVWLDSCRFADNGIGLTLASGGTFPYDDGSKQEIKN 835
Query: 766 SLFVGESRNYGFQGGQNKYVGTGGIDQKPRTLPRNRTFPIRGFQIYDGPIHLTRSTFKKY 825
SLFVGES N G + N+ G GG+D RTLP + FPIRG Q+YDGPI++ TF+K+
Sbjct: 836 SLFVGESGNVGTEMMDNRIWGPGGLDHSGRTLPIGQNFPIRGIQLYDGPINIQNCTFRKF 895
Query: 826 VPTPDRYSSAIGFLMKNSWQITPRNNISLVKF-GPHVSLNVFFGKPGPWFEDCEMDGDKN 884
V R++SA+ F + N+WQ P NN++ + F ++ VFFG+PGPWF +MDGDK
Sbjct: 896 VALEGRHTSALAFRLNNAWQSCPHNNVTGIAFEDVPITSRVFFGEPGPWFNQLDMDGDKT 955
Query: 885 SIFHDIDGSVTGYKDAYVGRMDNYLIRHPSCVNVSKWNAVICSGTYAQVYVQTWSTQNLS 944
S+FHD+DGSV+ Y +Y+ + DN+L+RHP C+NV W ICSG YAQ+Y+Q + T NL
Sbjct: 956 SVFHDVDGSVSEYPGSYLTKNDNWLVRHPDCINVPDWRGAICSGCYAQMYIQAYKTSNLR 1015
Query: 945 MTITRDEYPSNPMVLRG-INQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKN 1003
M I ++++PS+P+ L G + + + QYQPVV L+KGYTIHW+ AP ++L+NFNK
Sbjct: 1016 MKIIKNDFPSHPLYLEGALTRSTHYQQYQPVVTLQKGYTIHWDQTAPAELAIWLINFNKG 1075
Query: 1004 DWIRVGLCYPSNTSFQVTFGYLQRQNGSLSKIEEYEPVHSLEELQRKQSERK-FYFDSST 1062
DWIRVGLCYP T+F + R SK + ++++++ R +Y+D +
Sbjct: 1076 DWIRVGLCYPRGTTFSILSDVHNRLLKQTSKTGVFVRTLQMDKVEQSYPGRSHYYWDEDS 1135
Query: 1063 GLLFLYLKAKSHRHGHSYCSSQGCERVKIQA-ATDSKDISNCMAKAYPQYYRKPSVVKRM 1121
GLLFL LKA++ R ++CS +GCER+KI+A + +S+C A AYP++ + V M
Sbjct: 1136 GLLFLKLKAQNEREKFAFCSMKGCERIKIKALIPKNAGVSDCTATAYPKFTERAVVDVPM 1195
Query: 1122 PAMLTGLCQGCGTRQVVFTSDPHKSYLPVQFQSPDKAETQR-GDPSVISVNGTDFTFRSA 1180
P L G + T D +L V+ +S + D + I V+G +
Sbjct: 1196 PKKLFG--------SQLKTKD---HFLEVKMESSKQHFFHLWNDFAYIEVDGKKYPSSED 1244
Query: 1181 GVLLLVVDPCSVPFRLTEKTVFPLADVSRIE----EYLKTGIPPRSIVLLSTRGE-IKQL 1235
G+ ++V+D R+ T F + + I Y+ T IP SIVL++++G + +
Sbjct: 1245 GIQVVVID--GNQGRVVSHTSFRNSILQGIPWQLFNYVAT-IPDNSIVLMASKGRYVSRG 1301
Query: 1236 NISHLLVPLGLAKPAHLYDKGSTIFLGFSGNFKPSWTKLFT 1276
+ +L LG + L K F+GF G+F+P W L T
Sbjct: 1302 PWTRVLEKLGADRGLKL--KEQMAFVGFKGSFRPIWVTLDT 1340
Score = 217 bits (553), Expect = 5e-56
Identities = 126/325 (38%), Positives = 186/325 (57%), Gaps = 10/325 (3%)
Query: 80 KNTFICFAITSFSFFIALAIILGISSKYAPDENCPDQNPRLRNWDPGQDSAKQVVIKEGD 139
+ F+ A+ + S+ + L G +S A CPDQ+P L+ W+PG D V I +G
Sbjct: 6 RQDFLFKAMLTISW-LTLTCFPGATSTVAA--GCPDQSPELQPWNPGHDQDHHVHIGQGK 62
Query: 140 MLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYILIQDGGALHIGAEKCRYKSK 199
L LTS ATV+SI I +GG LV KD I LRT +ILI +GG LH G+ C ++
Sbjct: 63 TLLLTSSATVYSIHISEGGKLVI---KDHDEPIVLRTRHILIDNGGELHAGSALCPFQGN 119
Query: 200 ATITLYGKSDEG-ESMPTFGKKFIGVEAGGTLELHGARKASWTLLARTLNSSGLPFGSYT 258
TI LYG++DEG + P +G K+IGV GG LELHG +K SWT L +TL+ G+ G Y
Sbjct: 120 FTIILYGRADEGIQPDPYYGLKYIGVGKGGALELHGQKKLSWTFLNKTLHPGGMAEGGYF 179
Query: 259 FEKDFS-RGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDS 317
FE+ + RG+ V VID + ++ S+RFDT+ + ES RL ++L GRI+++AV D
Sbjct: 180 FERSWGHRGVIVHVIDPKSGTVIHSDRFDTYRSKKESERLVQYLNAVPDGRILSVAVNDE 239
Query: 318 AAKSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTSCNESVRNYENHSSGGKA 377
+++ L + +LGS+ LG+R W+ + V S+S + + Y H A
Sbjct: 240 GSRN-LDDMARKAMTKLGSKHFLHLGFRHPWSFLTVKGNPSSSVEDHI-EYHGHRGSAAA 297
Query: 378 LAQREFYTVDGQKFSVTAYSEWIEE 402
+ F T G+ F+V+ SEW+++
Sbjct: 298 RVFKLFQTEHGEYFNVSLSSEWVQD 322
>gi|126116589 fibrocystin L [Homo sapiens]
Length = 4243
Score = 143 bits (361), Expect = 1e-33
Identities = 94/295 (31%), Positives = 139/295 (47%), Gaps = 64/295 (21%)
Query: 406 FLHMGEII---DGV--DMRAEVGILTRNIVIQGE---------------------VEDSC 439
+ H+G + DG + RAEVGILTRNI+I+G +C
Sbjct: 2364 YTHLGITVTLPDGTLFEARAEVGILTRNILIRGSDNVEWNNKIPACPDGFDTGEFATQTC 2423
Query: 440 YAENQCQFFDYDTFGGHIMIMK-----NFTSVHLSYVELKHMGQQ-QMGRYPVHFHLCGD 493
+ D FGG +M N + + YVE+ H GQ ++GRYP+H+HL GD
Sbjct: 2424 LQGKFGEEIGSDQFGGCVMFHAPVPGANMVTGRIEYVEVFHAGQAFRLGRYPIHWHLLGD 2483
Query: 494 VDYKGGYRHATFVDGLSIHHSFSRCITVHGTNGLLIKDTIGFDTLGHCFFLEDGIEQRNT 553
+ +K ++V G +IH +++R +T+H T+ LL++ I +D G FF+EDGIE N
Sbjct: 2484 LQFK------SYVRGCAIHQAYNRAVTIHNTHHLLVERNIIYDIKGGAFFIEDGIEHGNI 2537
Query: 554 LFHNLGLLTKPGTLLPTDRNNSMCTTMRDKVFGNYIPVPATDCMAVSTFWIAHPNNNLIN 613
L +NL + + T L D + + FW+ +PNN + +
Sbjct: 2538 LQYNLAVFVQQSTSL------------------------LNDDVTPAAFWVTNPNNTIRH 2573
Query: 614 NAAAGSQDAGIWYLFHKEPTGESSGLQLLAKPELTPLGIFYNNRVHSNFKAGLFI 668
NA AG G WY + P G S + K PLG F+NN VHS G++I
Sbjct: 2574 NAVAGGTHFGFWYRMNNHPDGPSYDRNICQK--RVPLGEFFNNTVHSQGWFGMWI 2626
Score = 63.5 bits (153), Expect = 1e-09
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 133 VVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRTHYILIQDGGALHIGAE 192
VVI +G + L + +++ GG L+F + +I L+ ILI DGG L IG E
Sbjct: 2198 VVITKGQTILLDQSTPILKMLLIQGGTLIFDE-----ADIELQAENILITDGGVLQIGTE 2252
Query: 193 KCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGAR-KASWTLLART 246
++ KA ITL+G E +P +G K + V G L+LHG +WT LA T
Sbjct: 2253 TSPFQHKAVITLHGHLRSPE-LPVYGAKTLAVRE-GILDLHGVPVPVTWTRLAHT 2305
Score = 54.3 bits (129), Expect = 8e-07
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 25/134 (18%)
Query: 418 MRAEVGILTRNIVIQGEVEDSCYAENQCQFFDYDTFGGHIMI------MKNFT-SVHLSY 470
+ A+VGIL+RNI I GE + D+FG +++ M F + +S
Sbjct: 3250 LAADVGILSRNIKIVGEDYPG---------WSEDSFGARVLVGSFTENMMTFKGNARISN 3300
Query: 471 VELKHMGQQQMG-----RYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHGTN 525
VE H GQ+ RY V F G + G ++++ G + HH FS I V GT+
Sbjct: 3301 VEFYHSGQEGFRDSTDPRYAVTFLNLGQIQEHG----SSYIRGCAFHHGFSPAIGVFGTD 3356
Query: 526 GLLIKDTIGFDTLG 539
GL I D I T+G
Sbjct: 3357 GLDIDDNIIHFTVG 3370
Score = 35.8 bits (81), Expect = 0.28
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 909 LIRHPSCVNVSKWNAVICSGT-YAQVYVQTWS----TQNLS-MTITRDEY------PSNP 956
+IR +C + +W + C G YA + +++ T+ LS + I + Y P +
Sbjct: 3744 IIRDSTCKYLPEWQSYQCFGMEYAMMVIESLDPDTETRRLSPVAIMGNGYVDLINGPQDH 3803
Query: 957 MVLRGINQKAAFPQYQPVVMLEKGYTIHWNGPAPRTTFLYLVNFNKNDWIRVGLCY 1012
G + + +V L K Y +++ G +P+ L L+N + N + VG+ +
Sbjct: 3804 GWCAGYTCQRRLSLFHSIVALNKSYEVYFTGTSPQNLRLMLLNVDHNKAVLVGIFF 3859
>gi|126131104 fibrocystin isoform 2 [Homo sapiens]
Length = 3396
Score = 65.5 bits (158), Expect = 3e-10
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 119 RLRNWDPGQ--DSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRT 176
R +W P + V ++ G +L L ++ ++ +++ GG L+F I LR
Sbjct: 1930 RTHSWFPERLPQDGDNVTVENGQLLLLDTNTSILNLLHIKGGKLIFM----APGPIELRA 1985
Query: 177 HYILIQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGA 235
H IL+ DGG L IG+E ++ +A ITLYG S P +G KF+ V GTL LHG+
Sbjct: 1986 HAILVSDGGELRIGSEDKPFQGRAQITLYGSSYSTPFFP-YGVKFLAVR-NGTLSLHGS 2042
Score = 49.7 bits (117), Expect = 2e-05
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 49/274 (17%)
Query: 418 MRAEVGILTRNIVIQGEVED-------SCYAEN-------QCQFFDYDTFGGHI-----M 458
++A V +L+R+I IQG + + SC N C + + G +
Sbjct: 2128 LKATVALLSRSITIQGNLTNEREKLLVSCQEANAPEGNLQHCLYSMSEKMLGSRDMGARV 2187
Query: 459 IMKNFTSVHLSYVELKHMGQQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRC 518
I+++F S V+LK + Q +G+ H HL + G R + F+ G ++ +SFSR
Sbjct: 2188 IVQSFPE-EPSQVQLKGVQFQVLGQ-AFHKHL-SSLTLVGAMRES-FIQGCTVRNSFSRG 2243
Query: 519 ITVHGTNGLLIKDTIGFDTLGHCFFLEDGIEQR----NTLFHNLGLLTKPGTLLPTDRNN 574
+++ GT GL + + ++ LGH + E R + + G ++ RNN
Sbjct: 2244 LSMCGTLGLKVDSNVFYNILGHALLVGTCTEMRYISWEAIHGRKDDWSGHGNII---RNN 2300
Query: 575 SMCTTMRDKVFGNYIPVPATDCMAVSTFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTG 634
+ + N + + S +I P N + N G AG Y FH T
Sbjct: 2301 VIIQVSGAEGLSN------PEMLTPSGIYICSPTNVIEGNRVCG---AGYGYFFHL-MTN 2350
Query: 635 ESSGLQLLAKPELTPLGIFYNNRVHSNFKAGLFI 668
++S LL+ F N HS + GLF+
Sbjct: 2351 QTSQAPLLS---------FTQNIAHSCTRYGLFV 2375
Score = 40.8 bits (94), Expect = 0.009
Identities = 84/351 (23%), Positives = 126/351 (35%), Gaps = 118/351 (33%)
Query: 407 LHMGEIIDGVDMRAEVGILTRNIVIQGEVEDSCYAENQCQFF---DYDTFGGHIMIMKNF 463
+H+ E + + AEVG+LTRNI IQ +V SC F + F G + ++
Sbjct: 2935 VHVTEDGRHIRLAAEVGLLTRNIQIQPDV--SCRGRLFVGSFRKSSREEFSGVLQLLN-- 2990
Query: 464 TSVHLSYVELKHMGQQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHG 523
VE+++ G L V++ +++ ++H S I
Sbjct: 2991 -------VEIQNFGSP----------LYSSVEF-SNVSAGSWIISSTLHQSCGGGIHAAA 3032
Query: 524 TNGLLIKDTIGFDTLGHCFFLEDGIEQRNTLFHNL-GLLTKPGTLLPTDRNNSMCTTMRD 582
++G+L+ D I F T GH LE Q T+ +NL L+T+P
Sbjct: 3033 SHGVLLNDNIVFGTAGHGIDLEG---QAYTVTNNLVVLMTQP------------------ 3071
Query: 583 KVFGNYIPVPATDCMAVSTFWIAH------PNNNLINNAAAGSQDAGIWYLFHKEPTGES 636
A ST W+A + NL N AGS+ G HK
Sbjct: 3072 ---------------AWSTIWVAGIKVNQVKDINLHGNVVAGSERLGFHIRGHK-----C 3111
Query: 637 SGLQLLAKPELTPLGIFYNNRVHSNFKA-GLFIDKGVKTTNSSAADPREYLCLDNSARFR 695
S +LL + +N HS+ L+ + G LDN R
Sbjct: 3112 SSCELL----------WSDNVAHSSLHGLHLYKESG----------------LDNCTR-- 3143
Query: 696 PHQDANPEKPRVAALIDRLIAFKNNDNGAWVR-GGDIIVQNSAFADNGIGL 745
I +AFKN D GA + + ++N DN IGL
Sbjct: 3144 ---------------ISGFLAFKNFDYGAMLHVENSVEIENITLVDNTIGL 3179
>gi|126131102 fibrocystin isoform 1 [Homo sapiens]
Length = 4074
Score = 65.5 bits (158), Expect = 3e-10
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 119 RLRNWDPGQ--DSAKQVVIKEGDMLRLTSDATVHSIVIQDGGLLVFGDNKDGSRNITLRT 176
R +W P + V ++ G +L L ++ ++ +++ GG L+F I LR
Sbjct: 1930 RTHSWFPERLPQDGDNVTVENGQLLLLDTNTSILNLLHIKGGKLIFM----APGPIELRA 1985
Query: 177 HYILIQDGGALHIGAEKCRYKSKATITLYGKSDEGESMPTFGKKFIGVEAGGTLELHGA 235
H IL+ DGG L IG+E ++ +A ITLYG S P +G KF+ V GTL LHG+
Sbjct: 1986 HAILVSDGGELRIGSEDKPFQGRAQITLYGSSYSTPFFP-YGVKFLAVR-NGTLSLHGS 2042
Score = 49.7 bits (117), Expect = 2e-05
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 49/274 (17%)
Query: 418 MRAEVGILTRNIVIQGEVED-------SCYAEN-------QCQFFDYDTFGGHI-----M 458
++A V +L+R+I IQG + + SC N C + + G +
Sbjct: 2128 LKATVALLSRSITIQGNLTNEREKLLVSCQEANAPEGNLQHCLYSMSEKMLGSRDMGARV 2187
Query: 459 IMKNFTSVHLSYVELKHMGQQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRC 518
I+++F S V+LK + Q +G+ H HL + G R + F+ G ++ +SFSR
Sbjct: 2188 IVQSFPE-EPSQVQLKGVQFQVLGQ-AFHKHL-SSLTLVGAMRES-FIQGCTVRNSFSRG 2243
Query: 519 ITVHGTNGLLIKDTIGFDTLGHCFFLEDGIEQR----NTLFHNLGLLTKPGTLLPTDRNN 574
+++ GT GL + + ++ LGH + E R + + G ++ RNN
Sbjct: 2244 LSMCGTLGLKVDSNVFYNILGHALLVGTCTEMRYISWEAIHGRKDDWSGHGNII---RNN 2300
Query: 575 SMCTTMRDKVFGNYIPVPATDCMAVSTFWIAHPNNNLINNAAAGSQDAGIWYLFHKEPTG 634
+ + N + + S +I P N + N G AG Y FH T
Sbjct: 2301 VIIQVSGAEGLSN------PEMLTPSGIYICSPTNVIEGNRVCG---AGYGYFFHL-MTN 2350
Query: 635 ESSGLQLLAKPELTPLGIFYNNRVHSNFKAGLFI 668
++S LL+ F N HS + GLF+
Sbjct: 2351 QTSQAPLLS---------FTQNIAHSCTRYGLFV 2375
Score = 40.8 bits (94), Expect = 0.009
Identities = 84/351 (23%), Positives = 126/351 (35%), Gaps = 118/351 (33%)
Query: 407 LHMGEIIDGVDMRAEVGILTRNIVIQGEVEDSCYAENQCQFF---DYDTFGGHIMIMKNF 463
+H+ E + + AEVG+LTRNI IQ +V SC F + F G + ++
Sbjct: 2935 VHVTEDGRHIRLAAEVGLLTRNIQIQPDV--SCRGRLFVGSFRKSSREEFSGVLQLLN-- 2990
Query: 464 TSVHLSYVELKHMGQQQMGRYPVHFHLCGDVDYKGGYRHATFVDGLSIHHSFSRCITVHG 523
VE+++ G L V++ +++ ++H S I
Sbjct: 2991 -------VEIQNFGSP----------LYSSVEF-SNVSAGSWIISSTLHQSCGGGIHAAA 3032
Query: 524 TNGLLIKDTIGFDTLGHCFFLEDGIEQRNTLFHNL-GLLTKPGTLLPTDRNNSMCTTMRD 582
++G+L+ D I F T GH LE Q T+ +NL L+T+P
Sbjct: 3033 SHGVLLNDNIVFGTAGHGIDLEG---QAYTVTNNLVVLMTQP------------------ 3071
Query: 583 KVFGNYIPVPATDCMAVSTFWIAH------PNNNLINNAAAGSQDAGIWYLFHKEPTGES 636
A ST W+A + NL N AGS+ G HK
Sbjct: 3072 ---------------AWSTIWVAGIKVNQVKDINLHGNVVAGSERLGFHIRGHK-----C 3111
Query: 637 SGLQLLAKPELTPLGIFYNNRVHSNFKA-GLFIDKGVKTTNSSAADPREYLCLDNSARFR 695
S +LL + +N HS+ L+ + G LDN R
Sbjct: 3112 SSCELL----------WSDNVAHSSLHGLHLYKESG----------------LDNCTR-- 3143
Query: 696 PHQDANPEKPRVAALIDRLIAFKNNDNGAWVR-GGDIIVQNSAFADNGIGL 745
I +AFKN D GA + + ++N DN IGL
Sbjct: 3144 ---------------ISGFLAFKNFDYGAMLHVENSVEIENITLVDNTIGL 3179
>gi|210147552 O-linked mannose
beta1,2-N-acetylglucosaminyltransferase [Homo sapiens]
Length = 660
Score = 49.3 bits (116), Expect = 2e-05
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 261 KDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAAK 320
++ RG++V V++Q T ++ FDT+ +E + FL PGR++ V D +
Sbjct: 125 REQGRGIHVIVLNQATGHVMAKRVFDTYS-PHEDEAMVLFLNMVAPGRVLICTVKDEGSF 183
Query: 321 SLLQGTIQMIQERLGSELIQGLGYRQAWALVG 352
L + T + + LGS+ LG+R WA VG
Sbjct: 184 HL-KDTAKALLRSLGSQAGPALGWRDTWAFVG 214
>gi|20270363 family with sequence similarity 3, member D [Homo
sapiens]
Length = 224
Score = 43.5 bits (101), Expect = 0.001
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 260 EKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAA 319
+ + RGLN+ +++ T +L + FD Y + L +FL+ G +V +A D
Sbjct: 94 KNNVGRGLNIALVNGTTGAVLGQKAFDM--YSGDVMHLVKFLKEIPGGALVLVASYDDPG 151
Query: 320 KSLLQGTIQMIQERLGSELIQGLGYRQAWALVGVID 355
+ + ++ + LGS + LG+R +W +G D
Sbjct: 152 TKMNDESRKLFSD-LGSSYAKQLGFRDSWVFIGAKD 186
>gi|13324682 family 3, member A protein [Homo sapiens]
Length = 230
Score = 42.4 bits (98), Expect = 0.003
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 265 RGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAAKSLLQ 324
RGLN+ +++ + +++E+ FD + + L +F+R G +V +A D A + +
Sbjct: 103 RGLNIALVNGVSGELIEARAFDM--WAGDVNDLLKFIRPLHEGTLVFVASYDDPATKMNE 160
Query: 325 GTIQMIQERLGSELIQGLGYRQAWALVG 352
T ++ E LGS + L +R +W VG
Sbjct: 161 ETRKLFSE-LGSRNAKELAFRDSWVFVG 187
>gi|91807125 family with sequence similarity 3, member C precursor
[Homo sapiens]
Length = 227
Score = 41.6 bits (96), Expect = 0.005
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 260 EKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAA 319
+ + RG+NV + + T ++L+++ FD + + EFL+ G IV + D A
Sbjct: 97 KNNVGRGINVALANGKTGEVLDTKYFDM--WGGDVAPFIEFLKAIQDGTIVLMGTYDDGA 154
Query: 320 KSLLQGTIQMIQERLGSELIQGLGYRQAWALVG 352
L ++I + LGS I LG+R W G
Sbjct: 155 TKLNDEARRLIAD-LGSTSITNLGFRDNWVFCG 186
>gi|7661714 family with sequence similarity 3, member C precursor
[Homo sapiens]
Length = 227
Score = 41.6 bits (96), Expect = 0.005
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 260 EKDFSRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAA 319
+ + RG+NV + + T ++L+++ FD + + EFL+ G IV + D A
Sbjct: 97 KNNVGRGINVALANGKTGEVLDTKYFDM--WGGDVAPFIEFLKAIQDGTIVLMGTYDDGA 154
Query: 320 KSLLQGTIQMIQERLGSELIQGLGYRQAWALVG 352
L ++I + LGS I LG+R W G
Sbjct: 155 TKLNDEARRLIAD-LGSTSITNLGFRDNWVFCG 186
>gi|46255032 family with sequence similarity 3, member B isoform b
[Homo sapiens]
Length = 187
Score = 37.4 bits (85), Expect = 0.096
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 264 SRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAAKSLL 323
+RG+N+ +++ T + + FD +E N S + +F++ P ++ + D + L
Sbjct: 58 ARGINIAIVNYVTGNVTATRCFDMYEGDN-SGPMTKFIQSAAPKSLLFMVTYDDGSTRLN 116
Query: 324 QGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTSCNESVRNYENHS 372
I E LGS+ I+ + +R +W + G +E R NHS
Sbjct: 117 NDAKNAI-EALGSKEIRNMKFRSSWVFIAA--KGLELPSEIQREKINHS 162
>gi|46255030 family with sequence similarity 3, member B isoform a
[Homo sapiens]
Length = 235
Score = 37.4 bits (85), Expect = 0.096
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 264 SRGLNVRVIDQDTAKILESERFDTHEYRNESRRLQEFLRFQDPGRIVAIAVGDSAAKSLL 323
+RG+N+ +++ T + + FD +E N S + +F++ P ++ + D + L
Sbjct: 106 ARGINIAIVNYVTGNVTATRCFDMYEGDN-SGPMTKFIQSAAPKSLLFMVTYDDGSTRLN 164
Query: 324 QGTIQMIQERLGSELIQGLGYRQAWALVGVIDGGSTSCNESVRNYENHS 372
I E LGS+ I+ + +R +W + G +E R NHS
Sbjct: 165 NDAKNAI-EALGSKEIRNMKFRSSWVFIAA--KGLELPSEIQREKINHS 210
>gi|29294649 dicer1 [Homo sapiens]
Length = 1922
Score = 32.3 bits (72), Expect = 3.1
Identities = 34/132 (25%), Positives = 45/132 (34%), Gaps = 18/132 (13%)
Query: 1156 DKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDP-------------CSVPFRLTEKTVF 1202
+K+E + G PS T F F+ V+ P V LT + F
Sbjct: 901 EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF 960
Query: 1203 PLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGSTIFLG 1262
P + EY KT L T L++ H L L P HL KG + L
Sbjct: 961 PSPEYETFAEYYKT-----KYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLS 1015
Query: 1263 FSGNFKPSWTKL 1274
+ K W L
Sbjct: 1016 SAEKRKAKWESL 1027
>gi|29294651 dicer1 [Homo sapiens]
Length = 1922
Score = 32.3 bits (72), Expect = 3.1
Identities = 34/132 (25%), Positives = 45/132 (34%), Gaps = 18/132 (13%)
Query: 1156 DKAETQRGDPSVISVNGTDFTFRSAGVLLLVVDP-------------CSVPFRLTEKTVF 1202
+K+E + G PS T F F+ V+ P V LT + F
Sbjct: 901 EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF 960
Query: 1203 PLADVSRIEEYLKTGIPPRSIVLLSTRGEIKQLNISHLLVPLGLAKPAHLYDKGSTIFLG 1262
P + EY KT L T L++ H L L P HL KG + L
Sbjct: 961 PSPEYETFAEYYKT-----KYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLS 1015
Query: 1263 FSGNFKPSWTKL 1274
+ K W L
Sbjct: 1016 SAEKRKAKWESL 1027
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 32.0 bits (71), Expect = 4.0
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Query: 6 SRGHSPAFLQPQNGNSRHPSGYVPGKVVPLRPPPPPKSQASA-----KFTSIRREDRATF 60
SRG +P + P++ S VP PP K + K RRE+RA +
Sbjct: 93 SRGPTPPAMGPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKY 152
Query: 61 AFS--------PEEQQAQRESQKQKRHK 80
+ E+ +A RE Q Q+R +
Sbjct: 153 LAAKKAVWLEKEEKAKALREKQLQERRR 180
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 31.6 bits (70), Expect = 5.3
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 20 NSRHPSGYVPGKVVPLR-----PPPPPKSQASAKFTSIRREDRATFAFSPEEQQAQRESQ 74
+S+ P+G P VP R PPPPP A+ R+ P + Q +
Sbjct: 362 HSKEPAGSTPAPQVPARERETPPPPPPPPAANLLLLGPSGRARSHSTPLPPQGSGQPRGE 421
Query: 75 KQKRHKNTFIC 85
++ + ++ IC
Sbjct: 422 RELPNSHSMIC 432
>gi|62422571 collapsin response mediator protein 1 isoform 1 [Homo
sapiens]
Length = 686
Score = 31.2 bits (69), Expect = 6.9
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 763 VSESLFVGESRNYGFQGGQNKYVGTGGIDQK--PRTLPRNRTFPIRGFQ--IYDGPIHLT 818
+S+ V E N G +++ + R RN+ F ++G +YDGP++
Sbjct: 561 ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEV 620
Query: 819 RSTFKKYVPTPDRYSS 834
+T K P P SS
Sbjct: 621 PATPKYATPAPSAKSS 636
>gi|4503051 collapsin response mediator protein 1 isoform 2 [Homo
sapiens]
Length = 572
Score = 31.2 bits (69), Expect = 6.9
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 763 VSESLFVGESRNYGFQGGQNKYVGTGGIDQK--PRTLPRNRTFPIRGFQ--IYDGPIHLT 818
+S+ V E N G +++ + R RN+ F ++G +YDGP++
Sbjct: 447 ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEV 506
Query: 819 RSTFKKYVPTPDRYSS 834
+T K P P SS
Sbjct: 507 PATPKYATPAPSAKSS 522
>gi|21493039 A-kinase anchor protein 4 isoform 2 [Homo sapiens]
Length = 845
Score = 30.8 bits (68), Expect = 9.0
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 316 DSAAKSLLQGTIQMIQERL-----GSELIQG------LGYRQAWALVGVIDGGSTSCNES 364
DS AK L+ +++IQ L G + + +GY GG ++ S
Sbjct: 529 DSLAKDLIVSALKLIQYHLTQQTKGKDTCEEDCPGSTMGYMAQSTQYEKCGGGQSAKALS 588
Query: 365 VRNYENHSSGGKALAQREFYTVDGQKFSVT 394
V+ E+H + G + Q+E +D QK ++
Sbjct: 589 VKQLESHRAPGPSTCQKENQHLDSQKMDMS 618
>gi|21493037 A-kinase anchor protein 4 isoform 1 [Homo sapiens]
Length = 854
Score = 30.8 bits (68), Expect = 9.0
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 316 DSAAKSLLQGTIQMIQERL-----GSELIQG------LGYRQAWALVGVIDGGSTSCNES 364
DS AK L+ +++IQ L G + + +GY GG ++ S
Sbjct: 538 DSLAKDLIVSALKLIQYHLTQQTKGKDTCEEDCPGSTMGYMAQSTQYEKCGGGQSAKALS 597
Query: 365 VRNYENHSSGGKALAQREFYTVDGQKFSVT 394
V+ E+H + G + Q+E +D QK ++
Sbjct: 598 VKQLESHRAPGPSTCQKENQHLDSQKMDMS 627
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,185,191
Number of Sequences: 37866
Number of extensions: 2541799
Number of successful extensions: 7100
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 7041
Number of HSP's gapped (non-prelim): 41
length of query: 1320
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1206
effective length of database: 13,930,794
effective search space: 16800537564
effective search space used: 16800537564
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.