Guide to the Human Genome
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Search of human proteins with 207028748

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|207028748 N-myc downstream regulated 1 [Homo sapiens]
         (394 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|207028748 N-myc downstream regulated 1 [Homo sapiens]              802   0.0  
gi|37655183 N-myc downstream regulated 1 [Homo sapiens]               802   0.0  
gi|14165266 N-myc downstream-regulated gene 3 isoform a [Homo sa...   481   e-136
gi|32130514 N-myc downstream-regulated gene 3 isoform b [Homo sa...   469   e-132
gi|194440722 NDRG family member 4 isoform 2 [Homo sapiens]            445   e-125
gi|13430864 NDRG family member 4 isoform 1 [Homo sapiens]             445   e-125
gi|14165264 NDRG family member 4 isoform 1 [Homo sapiens]             445   e-125
gi|42544224 N-myc downstream-regulated gene 2 isoform b [Homo sa...   399   e-111
gi|42544222 N-myc downstream-regulated gene 2 isoform a [Homo sa...   399   e-111
gi|42544220 N-myc downstream-regulated gene 2 isoform a [Homo sa...   399   e-111
gi|42544218 N-myc downstream-regulated gene 2 isoform b [Homo sa...   399   e-111
gi|42544216 N-myc downstream-regulated gene 2 isoform a [Homo sa...   399   e-111
gi|10280620 N-myc downstream-regulated gene 2 isoform b [Homo sa...   399   e-111
gi|42544213 N-myc downstream-regulated gene 2 isoform b [Homo sa...   399   e-111
gi|42544211 N-myc downstream-regulated gene 2 isoform a [Homo sa...   399   e-111
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]     35   0.12 
gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap...    35   0.12 
gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap...    35   0.12 
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]           35   0.15 
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]           35   0.15 
gi|148233596 LPS-responsive vesicle trafficking, beach and ancho...    34   0.20 
gi|239742514 PREDICTED: similar to Putative POM121-like protein ...    34   0.26 
gi|167234419 thyroid hormone receptor associated protein 3 [Homo...    33   0.34 
gi|239742580 PREDICTED: similar to Putative POM121-like protein ...    33   0.45 
gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo ...    32   1.00 
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ...    32   1.00 
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [...    32   1.00 
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]      31   1.7  
gi|151301154 mucin 6, gastric [Homo sapiens]                           31   1.7  
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s...    31   2.2  

>gi|207028748 N-myc downstream regulated 1 [Homo sapiens]
          Length = 394

 Score =  802 bits (2072), Expect = 0.0
 Identities = 394/394 (100%), Positives = 394/394 (100%)

Query: 1   MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60
           MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL
Sbjct: 1   MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60

Query: 61  TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120
           TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE
Sbjct: 61  TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120

Query: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180
           MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI
Sbjct: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180

Query: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240
           SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE
Sbjct: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240

Query: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300
           RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK
Sbjct: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300

Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360
           LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT
Sbjct: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360

Query: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394
           RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC
Sbjct: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394


>gi|37655183 N-myc downstream regulated 1 [Homo sapiens]
          Length = 394

 Score =  802 bits (2072), Expect = 0.0
 Identities = 394/394 (100%), Positives = 394/394 (100%)

Query: 1   MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60
           MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL
Sbjct: 1   MSREMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVIL 60

Query: 61  TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120
           TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE
Sbjct: 61  TYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAE 120

Query: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180
           MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI
Sbjct: 121 MLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180

Query: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240
           SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE
Sbjct: 181 SGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIE 240

Query: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300
           RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK
Sbjct: 241 RPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300

Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360
           LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT
Sbjct: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGT 360

Query: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394
           RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC
Sbjct: 361 RSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC 394


>gi|14165266 N-myc downstream-regulated gene 3 isoform a [Homo
           sapiens]
          Length = 375

 Score =  481 bits (1239), Expect = e-136
 Identities = 236/359 (65%), Positives = 289/359 (80%), Gaps = 5/359 (1%)

Query: 4   EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63
           E+QDV L E+KPL+   +  T   Q+FD QE DIET HG VHVT+ G PKGNRPVILTYH
Sbjct: 3   ELQDVQLTEIKPLLND-KNGTRNFQDFDCQEHDIETTHGVVHVTIRGLPKGNRPVILTYH 61

Query: 64  DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123
           DIG+NHK+C+N  FN+EDMQEITQHFAVCHVDAPGQQ+GA SFP GY YP+MD+LAEMLP
Sbjct: 62  DIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLP 121

Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183
            VL    LKSIIG+G GAGAYIL+RFALN+PE+VEGLVLINV+PCA+GW+DWAASK+SG 
Sbjct: 122 PVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLSGL 181

Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243
           T  + D++++H FG+EE+Q+N++++ TYR HI  D+N  NL LF+N+YN RRDLEIERP+
Sbjct: 182 TTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPI 241

Query: 244 PGTH---TVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300
            G +   + TL+C  LLVVGD+SPAV+AVVECNS+L+P  TTLLKMADCGGLPQ+ QP K
Sbjct: 242 LGQNDNKSKTLKCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGK 301

Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRT-ASGSSVTSLDGTRSRSHTSEGTRSRSHTSE 358
           L EAFKYF+QGMGY+PSASMTRL RSRT ++ SS+ S +   SRS TS  +     + E
Sbjct: 302 LTEAFKYFLQGMGYIPSASMTRLARSRTHSTSSSLGSGESPFSRSVTSNQSDGTQESCE 360


>gi|32130514 N-myc downstream-regulated gene 3 isoform b [Homo
           sapiens]
          Length = 363

 Score =  469 bits (1208), Expect = e-132
 Identities = 231/359 (64%), Positives = 283/359 (78%), Gaps = 17/359 (4%)

Query: 4   EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63
           E+QDV L E+KPL+               +E DIET HG VHVT+ G PKGNRPVILTYH
Sbjct: 3   ELQDVQLTEIKPLLND-------------KEHDIETTHGVVHVTIRGLPKGNRPVILTYH 49

Query: 64  DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123
           DIG+NHK+C+N  FN+EDMQEITQHFAVCHVDAPGQQ+GA SFP GY YP+MD+LAEMLP
Sbjct: 50  DIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLP 109

Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183
            VL    LKSIIG+G GAGAYIL+RFALN+PE+VEGLVLINV+PCA+GW+DWAASK+SG 
Sbjct: 110 PVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLSGL 169

Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243
           T  + D++++H FG+EE+Q+N++++ TYR HI  D+N  NL LF+N+YN RRDLEIERP+
Sbjct: 170 TTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPI 229

Query: 244 PGTH---TVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAK 300
            G +   + TL+C  LLVVGD+SPAV+AVVECNS+L+P  TTLLKMADCGGLPQ+ QP K
Sbjct: 230 LGQNDNKSKTLKCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGK 289

Query: 301 LAEAFKYFVQGMGYMPSASMTRLMRSRT-ASGSSVTSLDGTRSRSHTSEGTRSRSHTSE 358
           L EAFKYF+QGMGY+PSASMTRL RSRT ++ SS+ S +   SRS TS  +     + E
Sbjct: 290 LTEAFKYFLQGMGYIPSASMTRLARSRTHSTSSSLGSGESPFSRSVTSNQSDGTQESCE 348


>gi|194440722 NDRG family member 4 isoform 2 [Homo sapiens]
          Length = 391

 Score =  445 bits (1145), Expect = e-125
 Identities = 219/366 (59%), Positives = 276/366 (75%), Gaps = 13/366 (3%)

Query: 5   MQDVDLAEVKPLVEKGETITGL--------LQEFDVQEQDIETLHGSVHVTLCGTPKGNR 56
           +Q++   E KPL+ +G+  T L          + D +E DIET +G +HV + G+PKGNR
Sbjct: 24  LQELRFPEEKPLL-RGQDATELESSDAFLLAADTDWKEHDIETPYGLLHVVIRGSPKGNR 82

Query: 57  PVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMD 116
           P ILTYHD+G+NHK C+N  FN+EDMQEIT+HF VCHVDAPGQQ GA+ FP GY +PSM+
Sbjct: 83  PAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSME 142

Query: 117 QLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWA 176
           QLA MLP V+Q FG K +IG+G GAGAY+L +FAL  P++VEGLVL+N++P  +GW+DWA
Sbjct: 143 QLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWA 202

Query: 177 ASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRD 236
           A+K+SG T  LPD V+SHLF +EE+ +N E+V +YRQ I N +N  NL LF N YNSRRD
Sbjct: 203 ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRD 262

Query: 237 LEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQIS 296
           L+I RP    +  TL+CP +LVVGD++PA D VVECNSKLDPT TT LKMAD GGLPQ++
Sbjct: 263 LDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVT 322

Query: 297 QPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTR----SRSHTSEGTRS 352
           QP KL EAFKYF+QGMGYMPSASMTRL RSRTAS +S +S+DG+R    + S +SEG   
Sbjct: 323 QPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQ 382

Query: 353 RSHTSE 358
            +HT E
Sbjct: 383 VNHTME 388


>gi|13430864 NDRG family member 4 isoform 1 [Homo sapiens]
          Length = 371

 Score =  445 bits (1145), Expect = e-125
 Identities = 219/366 (59%), Positives = 276/366 (75%), Gaps = 13/366 (3%)

Query: 5   MQDVDLAEVKPLVEKGETITGL--------LQEFDVQEQDIETLHGSVHVTLCGTPKGNR 56
           +Q++   E KPL+ +G+  T L          + D +E DIET +G +HV + G+PKGNR
Sbjct: 4   LQELRFPEEKPLL-RGQDATELESSDAFLLAADTDWKEHDIETPYGLLHVVIRGSPKGNR 62

Query: 57  PVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMD 116
           P ILTYHD+G+NHK C+N  FN+EDMQEIT+HF VCHVDAPGQQ GA+ FP GY +PSM+
Sbjct: 63  PAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSME 122

Query: 117 QLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWA 176
           QLA MLP V+Q FG K +IG+G GAGAY+L +FAL  P++VEGLVL+N++P  +GW+DWA
Sbjct: 123 QLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWA 182

Query: 177 ASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRD 236
           A+K+SG T  LPD V+SHLF +EE+ +N E+V +YRQ I N +N  NL LF N YNSRRD
Sbjct: 183 ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRD 242

Query: 237 LEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQIS 296
           L+I RP    +  TL+CP +LVVGD++PA D VVECNSKLDPT TT LKMAD GGLPQ++
Sbjct: 243 LDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVT 302

Query: 297 QPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTR----SRSHTSEGTRS 352
           QP KL EAFKYF+QGMGYMPSASMTRL RSRTAS +S +S+DG+R    + S +SEG   
Sbjct: 303 QPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQ 362

Query: 353 RSHTSE 358
            +HT E
Sbjct: 363 VNHTME 368


>gi|14165264 NDRG family member 4 isoform 1 [Homo sapiens]
          Length = 371

 Score =  445 bits (1145), Expect = e-125
 Identities = 219/366 (59%), Positives = 276/366 (75%), Gaps = 13/366 (3%)

Query: 5   MQDVDLAEVKPLVEKGETITGL--------LQEFDVQEQDIETLHGSVHVTLCGTPKGNR 56
           +Q++   E KPL+ +G+  T L          + D +E DIET +G +HV + G+PKGNR
Sbjct: 4   LQELRFPEEKPLL-RGQDATELESSDAFLLAADTDWKEHDIETPYGLLHVVIRGSPKGNR 62

Query: 57  PVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMD 116
           P ILTYHD+G+NHK C+N  FN+EDMQEIT+HF VCHVDAPGQQ GA+ FP GY +PSM+
Sbjct: 63  PAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSME 122

Query: 117 QLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWA 176
           QLA MLP V+Q FG K +IG+G GAGAY+L +FAL  P++VEGLVL+N++P  +GW+DWA
Sbjct: 123 QLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWA 182

Query: 177 ASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRD 236
           A+K+SG T  LPD V+SHLF +EE+ +N E+V +YRQ I N +N  NL LF N YNSRRD
Sbjct: 183 ATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRD 242

Query: 237 LEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQIS 296
           L+I RP    +  TL+CP +LVVGD++PA D VVECNSKLDPT TT LKMAD GGLPQ++
Sbjct: 243 LDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVT 302

Query: 297 QPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTR----SRSHTSEGTRS 352
           QP KL EAFKYF+QGMGYMPSASMTRL RSRTAS +S +S+DG+R    + S +SEG   
Sbjct: 303 QPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQ 362

Query: 353 RSHTSE 358
            +HT E
Sbjct: 363 VNHTME 368


>gi|42544224 N-myc downstream-regulated gene 2 isoform b [Homo
           sapiens]
          Length = 357

 Score =  399 bits (1026), Expect = e-111
 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%)

Query: 4   EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63
           E+Q+V + E KPL+  G+T          +   +ET +GSV  T+ GTPK  RP ILTYH
Sbjct: 3   ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55

Query: 64  DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123
           D+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+DQLA+M+P
Sbjct: 56  DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115

Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183
            VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G 
Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175

Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243
           T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RRDL  ER  
Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233

Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303
                +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E
Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291

Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363
           AFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +      S G    
Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349

Query: 364 SHTSE 368
            HT E
Sbjct: 350 GHTME 354


>gi|42544222 N-myc downstream-regulated gene 2 isoform a [Homo
           sapiens]
          Length = 371

 Score =  399 bits (1026), Expect = e-111
 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%)

Query: 4   EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55
           E+Q+V + E KPL+        ++ E    +L +   Q   +ET +GSV  T+ GTPK  
Sbjct: 3   ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61

Query: 56  RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115
           RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+
Sbjct: 62  RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121

Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175
           DQLA+M+P VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW
Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181

Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235
           AA K++G T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RR
Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241

Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295
           DL  ER       +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ+
Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297

Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355
           +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +     
Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357

Query: 356 TSEGTRSRSHTSE 368
            S G     HT E
Sbjct: 358 LSSG--PPGHTME 368


>gi|42544220 N-myc downstream-regulated gene 2 isoform a [Homo
           sapiens]
          Length = 371

 Score =  399 bits (1026), Expect = e-111
 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%)

Query: 4   EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55
           E+Q+V + E KPL+        ++ E    +L +   Q   +ET +GSV  T+ GTPK  
Sbjct: 3   ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61

Query: 56  RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115
           RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+
Sbjct: 62  RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121

Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175
           DQLA+M+P VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW
Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181

Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235
           AA K++G T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RR
Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241

Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295
           DL  ER       +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ+
Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297

Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355
           +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +     
Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357

Query: 356 TSEGTRSRSHTSE 368
            S G     HT E
Sbjct: 358 LSSG--PPGHTME 368


>gi|42544218 N-myc downstream-regulated gene 2 isoform b [Homo
           sapiens]
          Length = 357

 Score =  399 bits (1026), Expect = e-111
 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%)

Query: 4   EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63
           E+Q+V + E KPL+  G+T          +   +ET +GSV  T+ GTPK  RP ILTYH
Sbjct: 3   ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55

Query: 64  DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123
           D+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+DQLA+M+P
Sbjct: 56  DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115

Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183
            VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G 
Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175

Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243
           T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RRDL  ER  
Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233

Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303
                +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E
Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291

Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363
           AFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +      S G    
Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349

Query: 364 SHTSE 368
            HT E
Sbjct: 350 GHTME 354


>gi|42544216 N-myc downstream-regulated gene 2 isoform a [Homo
           sapiens]
          Length = 371

 Score =  399 bits (1026), Expect = e-111
 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%)

Query: 4   EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55
           E+Q+V + E KPL+        ++ E    +L +   Q   +ET +GSV  T+ GTPK  
Sbjct: 3   ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61

Query: 56  RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115
           RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+
Sbjct: 62  RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121

Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175
           DQLA+M+P VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW
Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181

Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235
           AA K++G T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RR
Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241

Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295
           DL  ER       +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ+
Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297

Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355
           +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +     
Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357

Query: 356 TSEGTRSRSHTSE 368
            S G     HT E
Sbjct: 358 LSSG--PPGHTME 368


>gi|10280620 N-myc downstream-regulated gene 2 isoform b [Homo
           sapiens]
          Length = 357

 Score =  399 bits (1026), Expect = e-111
 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%)

Query: 4   EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63
           E+Q+V + E KPL+  G+T          +   +ET +GSV  T+ GTPK  RP ILTYH
Sbjct: 3   ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55

Query: 64  DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123
           D+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+DQLA+M+P
Sbjct: 56  DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115

Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183
            VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G 
Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175

Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243
           T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RRDL  ER  
Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233

Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303
                +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E
Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291

Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363
           AFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +      S G    
Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349

Query: 364 SHTSE 368
            HT E
Sbjct: 350 GHTME 354


>gi|42544213 N-myc downstream-regulated gene 2 isoform b [Homo
           sapiens]
          Length = 357

 Score =  399 bits (1026), Expect = e-111
 Identities = 200/365 (54%), Positives = 258/365 (70%), Gaps = 13/365 (3%)

Query: 4   EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH 63
           E+Q+V + E KPL+  G+T          +   +ET +GSV  T+ GTPK  RP ILTYH
Sbjct: 3   ELQEVQITEEKPLLP-GQTPEA------AKTHSVETPYGSVTFTVYGTPKPKRPAILTYH 55

Query: 64  DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP 123
           D+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+DQLA+M+P
Sbjct: 56  DVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 115

Query: 124 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW 183
            VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDWAA K++G 
Sbjct: 116 CVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGL 175

Query: 184 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM 243
           T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RRDL  ER  
Sbjct: 176 TSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFER-- 233

Query: 244 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE 303
                +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ++QP KL E
Sbjct: 234 --GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTE 291

Query: 304 AFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSR 363
           AFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +      S G    
Sbjct: 292 AFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSG--PP 349

Query: 364 SHTSE 368
            HT E
Sbjct: 350 GHTME 354


>gi|42544211 N-myc downstream-regulated gene 2 isoform a [Homo
           sapiens]
          Length = 371

 Score =  399 bits (1026), Expect = e-111
 Identities = 201/373 (53%), Positives = 261/373 (69%), Gaps = 15/373 (4%)

Query: 4   EMQDVDLAEVKPLV--------EKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGN 55
           E+Q+V + E KPL+        ++ E    +L +   Q   +ET +GSV  T+ GTPK  
Sbjct: 3   ELQEVQITEEKPLLPGQTPEAAKEAELAARILLD-QGQTHSVETPYGSVTFTVYGTPKPK 61

Query: 56  RPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSM 115
           RP ILTYHD+G+N+K+C+ PLF +EDMQEI Q+F   HVDAPG ++GA  FP GY YPS+
Sbjct: 62  RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL 121

Query: 116 DQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDW 175
           DQLA+M+P VLQ     +IIG+G GAGAYIL R+ALN+P+ VEGLVLIN++P A+GWMDW
Sbjct: 122 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW 181

Query: 176 AASKISGWTQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRR 235
           AA K++G T ++P+M++ HLF +EE+  N E++  YR  I +  N  N+ L+ N+YN+RR
Sbjct: 182 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR 241

Query: 236 DLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQI 295
           DL  ER       +TL+CP +LVVGD +P  DAVVECNSKLDPT+T+ LKMAD GG PQ+
Sbjct: 242 DLNFER----GGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL 297

Query: 296 SQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSH 355
           +QP KL EAFKYF+QGMGYM S+ MTRL RSRTAS +S  S+DG RSRS T   +     
Sbjct: 298 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT 357

Query: 356 TSEGTRSRSHTSE 368
            S G     HT E
Sbjct: 358 LSSG--PPGHTME 368


>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
          Length = 494

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNS 384
           +SR+ SGSS +S   +RSRS +   +RS+S +   +RSRS   E +       S +  +S
Sbjct: 203 KSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRS-KKEKSRSPSKEKSRSRSHS 261

Query: 385 AG 386
           AG
Sbjct: 262 AG 263



 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%)

Query: 340 TRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAH 371
           +RSRSH+   +RSRS  S  +RSRS +S+ +H
Sbjct: 186 SRSRSHSR--SRSRSRHSRKSRSRSGSSKSSH 215



 Score = 29.6 bits (65), Expect = 4.9
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 11/66 (16%)

Query: 325 RSRTASGSSVTSLDGTRS-----------RSHTSEGTRSRSHTSEGTRSRSHTSEGAHLD 373
           RSR+ SGS   S   +RS           RS + E +RSRSH++  +RS+S       + 
Sbjct: 219 RSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQ 278

Query: 374 ITPNSG 379
              N G
Sbjct: 279 NNDNVG 284



 Score = 29.3 bits (64), Expect = 6.5
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 310 QGMGYMPSASMTRLMRSRTASGS-SVTSLDG-TRSRSHTSEGTRSRSHTSEGTRSRS 364
           +G G   +A   +  RSR+ S S S  +L   +RSRS ++  TRSRS +   + SRS
Sbjct: 426 EGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRS 482



 Score = 28.9 bits (63), Expect = 8.4
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 323 LMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHT---SEGAHLDITPNSG 379
           L +SR+ S S   S   +RSRS + +  + R  + E +RSRS +   SE +    +    
Sbjct: 327 LRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDS 386

Query: 380 AAGNSAGPK 388
            AG+S   K
Sbjct: 387 KAGSSKKKK 395


>gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo
           sapiens]
          Length = 315

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 91  VCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFA 150
           V  VDA    D   S    Y   S D L ++LP    Q GL   + +G   G       A
Sbjct: 97  VLTVDARNHGDSPHSPDMSYEIMSQD-LQDLLP----QLGLVPCVVVGHSMGGKTAMLLA 151

Query: 151 LNNPEMVEGLVLINVNP 167
           L  PE+VE L+ ++++P
Sbjct: 152 LQRPELVERLIAVDISP 168


>gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo
           sapiens]
          Length = 308

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 91  VCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFA 150
           V  VDA    D   S    Y   S D L ++LP    Q GL   + +G   G       A
Sbjct: 90  VLTVDARNHGDSPHSPDMSYEIMSQD-LQDLLP----QLGLVPCVVVGHSMGGKTAMLLA 144

Query: 151 LNNPEMVEGLVLINVNP 167
           L  PE+VE L+ ++++P
Sbjct: 145 LQRPELVERLIAVDISP 161


>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
          Length = 330

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query: 317 SASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSE 368
           S S +   RS + S S  +S   +RSRS +S  ++SRS +S   RSRS  S+
Sbjct: 204 SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSK 255



 Score = 34.7 bits (78), Expect = 0.15
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
           SR++S SS  S   +RSRS +S  +RSRS + E +RSR   S  +
Sbjct: 215 SRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSS 259



 Score = 30.4 bits (67), Expect = 2.9
 Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 6/50 (12%)

Query: 316 PSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSH 365
           PS+S +R  RSR+ S SS  S    RSRS + E +RSR   S  + SRSH
Sbjct: 220 PSSSRSR-SRSRSRSSSSSQS----RSRSSSRERSRSRGSKSRSS-SRSH 263


>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
          Length = 320

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query: 317 SASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSE 368
           S S +   RS + S S  +S   +RSRS +S  ++SRS +S   RSRS  S+
Sbjct: 204 SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSK 255



 Score = 34.7 bits (78), Expect = 0.15
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
           SR++S SS  S   +RSRS +S  +RSRS + E +RSR   S  +
Sbjct: 215 SRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSS 259



 Score = 30.4 bits (67), Expect = 2.9
 Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 6/50 (12%)

Query: 316 PSASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSH 365
           PS+S +R  RSR+ S SS  S    RSRS + E +RSR   S  + SRSH
Sbjct: 220 PSSSRSR-SRSRSRSSSSSQS----RSRSSSRERSRSRGSKSRSS-SRSH 263


>gi|148233596 LPS-responsive vesicle trafficking, beach and anchor
            containing [Homo sapiens]
          Length = 2863

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 340  TRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSAGPKSM 390
            T +    SE T S      G    + T  G+H+++TP++   G SAGP ++
Sbjct: 1587 TTASVEESESTSSARRRDSGIGEETATGLGSHVEVTPHTAPPGVSAGPDAI 1637


>gi|239742514 PREDICTED: similar to Putative POM121-like protein
           1-like [Homo sapiens]
          Length = 896

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 40/142 (28%), Positives = 53/142 (37%), Gaps = 15/142 (10%)

Query: 260 GDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSAS 319
           G S+PA  A     S L+PT  +LL   D G    ++     A A +  V+        S
Sbjct: 597 GTSAPAAAAAAPPPSTLNPTSGSLLNAVDEGPSHFLASATAAARARRSQVR-YNQRSQTS 655

Query: 320 MTRLMRSRTASGSSVTSLDGTR--------SRSHTSEGTRSRSHTSE----GTRSRSHTS 367
            TR    R AS SS +S +G +        + SH      S +  SE       SR    
Sbjct: 656 RTRSCLKRNASSSSHSSTEGLQELKRRRGPASSHCQLALSSSNTVSEDGPQAVSSRDTRC 715

Query: 368 EGAHLDITPNSGAAGNSAGPKS 389
           E A  D  P    A     P+S
Sbjct: 716 EKA--DTAPGQTLAPRGGSPRS 735



 Score = 33.1 bits (74), Expect = 0.45
 Identities = 38/139 (27%), Positives = 54/139 (38%), Gaps = 12/139 (8%)

Query: 262 SSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSASMT 321
           S+PA  A     S L+PT  +LL   D G    ++     A A +  V+        S T
Sbjct: 326 SAPAAAAAAPPPSTLNPTSGSLLNAVDGGPSHFLASATAAARAQRSEVR-YNQRSQISRT 384

Query: 322 RLMRSRTASGSSVTSLDG----TRSRSHTSE-----GTRSRSHTSEGTR--SRSHTSEGA 370
           R    R AS SS +S +G     R R   S       + S++ + +G +  S  HT    
Sbjct: 385 RSCLKRNASSSSHSSTEGLPELKRRRGPASSHCQLAHSSSKTVSEDGPQAVSSGHTRCEK 444

Query: 371 HLDITPNSGAAGNSAGPKS 389
             D  P    A     P+S
Sbjct: 445 RADTAPGQTLAPRGGSPRS 463


>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
           sapiens]
          Length = 955

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 317 SASMTRLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRS----HTSEGAHL 372
           S S +R  RSR+AS S   S   +RSRS +   +R R   S  +RSRS    H  E  H 
Sbjct: 7   SKSGSRSSRSRSASRSRSRSFSKSRSRSRSLSRSRKR-RLSSRSRSRSYSPAHNRERNHP 65

Query: 373 DITPNSGAAGNSAG 386
            +  N    G++ G
Sbjct: 66  RVYQNRDFRGHNRG 79


>gi|239742580 PREDICTED: similar to Putative POM121-like protein
           1-like [Homo sapiens]
          Length = 897

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 6/136 (4%)

Query: 232 NSRRDLEIERPMPGTHTVTLQCPALLVV--GDSSPAVDAVVECNSKLDPTKTTLLKMADC 289
           +SR   ++   +P T T   +   +     G S+PA  A     S L+PT  +LL   D 
Sbjct: 568 HSRDSAQVTSLIPATFTAASRDAGMRRTRPGTSAPAAAAAALPPSTLNPTSGSLLNAVDG 627

Query: 290 GGLPQISQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLDG---TRSRSHT 346
           G    ++     A A +  V+        S TR    R AS SS +S +G    + R   
Sbjct: 628 GPSHFLASATAAARAQRSEVR-YNQRSQTSRTRSCLKRNASSSSHSSTEGLQELKRRRGP 686

Query: 347 SEGTRSRSHTSEGTRS 362
           +      +H+S  T S
Sbjct: 687 ASSHCQLAHSSSNTVS 702


>gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo
           sapiens]
          Length = 1521

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 15/68 (22%), Positives = 37/68 (54%)

Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSA 385
           S T S +++TS +G+   + +  G+ + + ++EG+ + + ++EG+       +G+   +A
Sbjct: 706 STTGSETTITSTEGSEITTASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTA 765

Query: 386 GPKSMEVS 393
              S E +
Sbjct: 766 STTSSETT 773



 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/68 (19%), Positives = 37/68 (54%)

Query: 326  SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSA 385
            S T + +++TS +G+ + + T+ G+ + +  + G+ + + ++EG+       +G+   +A
Sbjct: 1017 STTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTA 1076

Query: 386  GPKSMEVS 393
                +E +
Sbjct: 1077 STADLETT 1084



 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/68 (17%), Positives = 38/68 (55%)

Query: 326 SRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSA 385
           S  +S ++  +  G+ + + ++EG+ + + ++EG+ + + ++EG+ +     +G+   +A
Sbjct: 867 STESSETTTATTIGSETTTASTEGSETTTTSTEGSETTTASTEGSEITTVSTTGSETTTA 926

Query: 386 GPKSMEVS 393
             +  E +
Sbjct: 927 STEGSETT 934


>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
           [Homo sapiens]
          Length = 624

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 17/107 (15%)

Query: 278 PTKTTLLKMADCGGLPQI---------SQPAKLAEAFKYFVQGMGYMPSASMTRL----M 324
           PT+   ++ AD   +P+           +P K+  +    V+     P A+   L     
Sbjct: 221 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMK 280

Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAH 371
           R R A      +++    +S+  +G RSRSH    TRS+S +S  +H
Sbjct: 281 RVREAQSFISAAIEPESGKSNERKGGRSRSH----TRSKSRSSSKSH 323


>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
           [Homo sapiens]
          Length = 508

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 17/107 (15%)

Query: 278 PTKTTLLKMADCGGLPQI---------SQPAKLAEAFKYFVQGMGYMPSASMTRL----M 324
           PT+   ++ AD   +P+           +P K+  +    V+     P A+   L     
Sbjct: 105 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMK 164

Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAH 371
           R R A      +++    +S+  +G RSRSH    TRS+S +S  +H
Sbjct: 165 RVREAQSFISAAIEPESGKSNERKGGRSRSH----TRSKSRSSSKSH 207


>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
          Length = 344

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/45 (40%), Positives = 24/45 (53%)

Query: 322 RLMRSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHT 366
           R    R+ SGS   S    RSRS +   +RSRS +   +RSRS +
Sbjct: 184 RTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRS 228



 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/58 (34%), Positives = 27/58 (46%)

Query: 336 SLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVS 393
           S  G+RSRS +   +RSRS  S  +RSRS +   +         +   S G KS   S
Sbjct: 190 SYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKS 247



 Score = 29.6 bits (65), Expect = 4.9
 Identities = 21/65 (32%), Positives = 31/65 (47%)

Query: 325 RSRTASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNS 384
           RS + S S   S   +RSRS  S  +RSRS +   +RSRS +   +          + + 
Sbjct: 189 RSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSK 248

Query: 385 AGPKS 389
           + PKS
Sbjct: 249 SKPKS 253


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 329  ASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNS 378
            A+GS+ T+   T + S TS+   S S     T   SHTS   H ++TP S
Sbjct: 1492 ATGSTHTAPPITPTTSGTSQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTS 1541



 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/50 (36%), Positives = 25/50 (50%)

Query: 329  ASGSSVTSLDGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGAHLDITPNS 378
            A+GS+ T+   T + S TS+   S S     T    HTS   H ++TP S
Sbjct: 1885 ATGSTHTAPPMTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTS 1934


>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
            sapiens]
          Length = 2971

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 5    MQDVDLAEVKPLVEKGETI--TGLLQEF-DVQEQDIETLHGSVHVTLC 49
            ++++D  EV  +     T    G +QE  ++ EQ +ETLH ++H TLC
Sbjct: 1572 VRNIDSEEVGKIASNSATAFRVGNVQELSELSEQVLETLHDAMHETLC 1619


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,613,978
Number of Sequences: 37866
Number of extensions: 713607
Number of successful extensions: 2858
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2259
Number of HSP's gapped (non-prelim): 540
length of query: 394
length of database: 18,247,518
effective HSP length: 104
effective length of query: 290
effective length of database: 14,309,454
effective search space: 4149741660
effective search space used: 4149741660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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