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Search of human proteins with 113423861
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113423861 PREDICTED: hypothetical protein [Homo sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169204928 PREDICTED: hypothetical protein [Homo sapiens] 452 e-127
gi|113423861 PREDICTED: hypothetical protein [Homo sapiens] 452 e-127
gi|113423437 PREDICTED: hypothetical protein [Homo sapiens] 452 e-127
gi|40353727 synaptopodin isoform A [Homo sapiens] 50 1e-06
gi|239754935 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo ... 46 2e-05
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 46 2e-05
gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo ... 46 2e-05
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 45 5e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 45 6e-05
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 44 1e-04
gi|110431370 espin [Homo sapiens] 44 1e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 1e-04
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 43 2e-04
gi|38788260 bromodomain PHD finger transcription factor isoform ... 42 3e-04
gi|38788274 bromodomain PHD finger transcription factor isoform ... 42 3e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 42 4e-04
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|239754370 PREDICTED: hypothetical protein [Homo sapiens] 41 9e-04
gi|239748924 PREDICTED: hypothetical protein [Homo sapiens] 41 9e-04
gi|239742946 PREDICTED: hypothetical protein [Homo sapiens] 41 9e-04
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 40 0.001
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 40 0.001
gi|18959210 WIRE protein [Homo sapiens] 40 0.001
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 40 0.002
gi|54792090 hypothetical protein LOC23351 [Homo sapiens] 39 0.003
gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo sap... 39 0.003
gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo sap... 39 0.003
>gi|169204928 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 452 bits (1163), Expect = e-127
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA 60
MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA
Sbjct: 1 MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA 60
Query: 61 LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR 120
LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR
Sbjct: 61 LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR 120
Query: 121 AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ
Sbjct: 121 AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
Query: 181 AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF 215
AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF
Sbjct: 181 AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF 215
>gi|113423861 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 452 bits (1163), Expect = e-127
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA 60
MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA
Sbjct: 1 MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA 60
Query: 61 LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR 120
LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR
Sbjct: 61 LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR 120
Query: 121 AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ
Sbjct: 121 AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
Query: 181 AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF 215
AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF
Sbjct: 181 AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF 215
>gi|113423437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 215
Score = 452 bits (1163), Expect = e-127
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA 60
MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA
Sbjct: 1 MECPAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFA 60
Query: 61 LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR 120
LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR
Sbjct: 61 LICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR 120
Query: 121 AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ
Sbjct: 121 AETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
Query: 181 AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF 215
AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF
Sbjct: 181 AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRGKF 215
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 50.4 bits (119), Expect = 1e-06
Identities = 50/174 (28%), Positives = 65/174 (37%), Gaps = 47/174 (27%)
Query: 4 PAPAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFALIC 63
P+ AW P+ PR +FS+ G+ A+ RR + S W
Sbjct: 650 PSRAWS----PRAKQAPRPSFSTRNA-----------GIEAQDRRESLPTSPPW-----T 689
Query: 64 PRQERSPSP-SRWLAPGPWR-GMGPGAVREGPQVKGARTSPA------------------ 103
P R PS W++PGPW G G P SP+
Sbjct: 690 PGASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPP 749
Query: 104 --AIIALLPPHVAAAAR-----PRAETAAVTDGVTSPRAWPPPPPPPLPPAPTR 150
+ ALL ++ AAR PR+ A + PRA PPPPPPP PP R
Sbjct: 750 SRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMR 803
Score = 36.2 bits (82), Expect = 0.022
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 110 PPHVAAAARPRAETAAVTDGVTSPRAWPP------PPPPPLPPAPTRHGNTDVRASQPIA 163
PP A+RP + DG SP W P PPPLPP P + R+ P+
Sbjct: 686 PPWTPGASRPPSSL----DGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPL- 740
Query: 164 GCGRREGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPL---TPATLSRPR 212
R R RQ +AL R RR+ + P P S PR
Sbjct: 741 ----RPETEAR-PPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPR 787
Score = 28.9 bits (63), Expect = 3.5
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 42 VGAETRRGAAQMSADWGFALICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTS 101
+ A R+ A+ SA R SP R P P P +R PQ AR
Sbjct: 762 INAARRKSASPRSAG-------AENPRPFSPPRAPPPPPPPPPPPPRMRS-PQP--ARPG 811
Query: 102 PAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPPPPPP 143
AA+ P A A PR+ A TSPR+ P PP P
Sbjct: 812 SAAV-----PGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRP 848
>gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 397
Score = 46.2 bits (108), Expect = 2e-05
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 42 VGAETRRGAAQMSADWGFALICPRQE-----RSPSPSRWLAPGPWRGMGPGAVREGP--- 93
V E +R + ++A W PRQ R + S A P+ GA + P
Sbjct: 115 VNDENQRWTSHVTAPW------PRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPG 168
Query: 94 -QVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPP--PPPPLPPAPTR 150
+ +GA T + P AA R+ A T P+ P P PPPPL P+P
Sbjct: 169 KRGRGAATRVFLVGLFASPRAAALLGDRSWEAR-----TEPQLLPLPLSPPPPLAPSPIP 223
Query: 151 HGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRG------RKKGRGVRRRKSPP 200
+ A+ G G R G R RG G +A G ++G G R +PP
Sbjct: 224 ERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPP 279
>gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo
sapiens]
Length = 397
Score = 46.2 bits (108), Expect = 2e-05
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 42 VGAETRRGAAQMSADWGFALICPRQE-----RSPSPSRWLAPGPWRGMGPGAVREGP--- 93
V E +R + ++A W PRQ R + S A P+ GA + P
Sbjct: 115 VNDENQRWTSHVTAPW------PRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPG 168
Query: 94 -QVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPP--PPPPLPPAPTR 150
+ +GA T + P AA R+ A T P+ P P PPPPL P+P
Sbjct: 169 KRGRGAATRVFLVGLFASPRAAALLGDRSWEAR-----TEPQLLPLPLSPPPPLAPSPIP 223
Query: 151 HGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRG------RKKGRGVRRRKSPP 200
+ A+ G G R G R RG G +A G ++G G R +PP
Sbjct: 224 ERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPP 279
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 46.2 bits (108), Expect = 2e-05
Identities = 39/118 (33%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 110 PPHVAAAARPRAETAAVTDGVTSPRAWPPPPPP------------------PLPPAPTRH 151
PP RPR + A P A P PP P P P A R
Sbjct: 108 PPAPRPRPRPRRKLALDQAATRIPAARPRPPGPGGRGSHWKIQPGVQRLPRPTPSAQPRP 167
Query: 152 GNTDVR-ASQPIAGCGRREGARWRGRGQRQAKALRGRKKGRGV---RRRKSPPPPLTP 205
G + R AS+P+ GCGR G W R+A R R+ G G RR K+ PP P
Sbjct: 168 GPPERRRASRPLIGCGRGGGGTW-----RRAADSRWRRPGGGFQRSRREKARPPRRLP 220
>gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo
sapiens]
Length = 397
Score = 46.2 bits (108), Expect = 2e-05
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 42 VGAETRRGAAQMSADWGFALICPRQE-----RSPSPSRWLAPGPWRGMGPGAVREGP--- 93
V E +R + ++A W PRQ R + S A P+ GA + P
Sbjct: 115 VNDENQRWTSHVTAPW------PRQGGGRSVRGSAESSLRASFPFSRRARGARLQPPAPG 168
Query: 94 -QVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPP--PPPPLPPAPTR 150
+ +GA T + P AA R+ A T P+ P P PPPPL P+P
Sbjct: 169 KRGRGAATRVFLVGLFASPRAAALLGDRSWEAR-----TEPQLLPLPLSPPPPLAPSPIP 223
Query: 151 HGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRG------RKKGRGVRRRKSPP 200
+ A+ G G R G R RG G +A G ++G G R +PP
Sbjct: 224 ERSLRSLAAWEALGKGGRLGRRCRGGGGERAGRKEGCPLWGWGRRGEGAAARAAPP 279
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 45.1 bits (105), Expect = 5e-05
Identities = 47/153 (30%), Positives = 57/153 (37%), Gaps = 30/153 (19%)
Query: 64 PRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAET 123
P+Q +PS S W PGP R G G P+ PA + A P A+ RPR
Sbjct: 318 PQQPTAPS-SEW--PGPQRSPGTG-----PRWTAPLPRPAPLPAKRPGDSPASKRPRP-- 367
Query: 124 AAVTDGVTSPRAWPPPP---PPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
G SP A PP P A G T VR + G G+ Q
Sbjct: 368 -----GGVSPEARDPPKGENPLCSSEAAGETGPTQVRGPDALGG------------GRLQ 410
Query: 181 AKALRGRKKGRGVRRRKSPPPPLTPATLSRPRG 213
K G+ G GV R +PP P P+G
Sbjct: 411 GKGREGKAPGEGVSPRPAPPRLGKPPRSRPPQG 443
Score = 29.6 bits (65), Expect = 2.0
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 139 PPPPPLPPAPTRHGNTDVRASQPIA-GCGRREGARWRGR---GQRQAKALRGRKKGRGVR 194
PPPP PAP G RA + CG R G+ G +++LR G +R
Sbjct: 223 PPPPRPSPAPGLTGRGQGRARGAVGLDCGCRPRPCSFGQPDVGSAPSRSLR----GCSLR 278
Query: 195 RRKSPPP---PLTPATLSRPR 212
R +PPP P++ RPR
Sbjct: 279 FRNTPPPIPGSDQPSSHGRPR 299
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 44.7 bits (104), Expect = 6e-05
Identities = 49/191 (25%), Positives = 61/191 (31%), Gaps = 49/191 (25%)
Query: 70 PSPSRWLAPGPWRGMGPGAVRE--------------GPQVKGARTSPAAIIAL------- 108
P P PGP + GPGA + P V PAA++ L
Sbjct: 176 PGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPG 235
Query: 109 ----LPPHVAAAA--RPRAETAAVTDGVTSPRAWPPPPPPP------------------- 143
PP V AAA P A + +P A PPPPPP
Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP 295
Query: 144 --LPPAPTRHGNTDVRASQPIAGCGRREGARWR-GRGQRQAKALRGRKKGRGVRRRKSPP 200
PPA ++G + A P G G + G G A G K R ++ P
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAP 355
Query: 201 PPLTPATLSRP 211
P S P
Sbjct: 356 PAAQTLAASGP 366
Score = 39.7 bits (91), Expect = 0.002
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 69 SPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPP--HVAAAARPRAETAAV 126
+P+P+ G GPGA P SP ++ PP AA+ P + A++
Sbjct: 314 APAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASM 373
Query: 127 TDGVTSPRAWPPPP--PPPLPPAPT 149
G T A P P PPP P PT
Sbjct: 374 VIGPTMQGALPSPAAVPPPAPGTPT 398
Score = 34.7 bits (78), Expect = 0.063
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 64 PRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTS------PAAIIALLPPHVAAAA 117
P++ PSP R L P G P A + P +G+ S AA+ A P A A
Sbjct: 102 PQRPGPPSPRRPLVPA---GPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPA 158
Query: 118 RPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHG 152
+P A P P P P P P P G
Sbjct: 159 KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG 193
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 16/130 (12%)
Query: 101 SPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPT-RHGNTDVR-A 158
+PA A PP + R R + + +S P PP P P + +H + D +
Sbjct: 504 APAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPG 563
Query: 159 SQPIAGCGRREGARWRGRGQRQAKALRGRKKG----------RGVRRRKSPPPPLTPATL 208
S + RR +R R R R+ R++G R RRR + PPP T ++
Sbjct: 564 SHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSS 623
Query: 209 S----RPRGK 214
S R RGK
Sbjct: 624 SSRRERHRGK 633
Score = 33.9 bits (76), Expect = 0.11
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 117 ARPRAETAAVTDGVTSPRAW----PPPPPPPLPPAP 148
A P A ++A + SP + PPPPPPP PPAP
Sbjct: 185 APPPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAP 220
Score = 33.1 bits (74), Expect = 0.18
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 93 PQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAP 148
PQ +R + A + L A P +A+ + + + P PPPPP PPAP
Sbjct: 162 PQSNSSRPTCARHLTLGTGDGGPAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPAP 217
Score = 32.0 bits (71), Expect = 0.41
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 111 PHVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAP 148
P A ++ + + + + SP PPPP PP PPAP
Sbjct: 186 PPPAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAP 223
Score = 32.0 bits (71), Expect = 0.41
Identities = 39/145 (26%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 78 PGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWP 137
P P G + EG V+ P ++L P AARP +A +P A
Sbjct: 380 PPPLLPPGDSEIEEGEIVQ-PEEEPRLALSLFRPG-GRAARPTPAASA------TPTA-Q 430
Query: 138 PPPPPPLPPAP------TRHGNTDVRASQPI-----AGCGRREGARWRGRGQRQAKALRG 186
P P PP P AP + H +D + + A +RW G R+ +
Sbjct: 431 PLPQPPAPRAPEGDDFLSLHAESDGEGALQVDLGEPAPAPPAADSRWGGLDLRRKILTQR 490
Query: 187 RKKGRGVRRRKSPPPPLTPATLSRP 211
R++ R +R SP P PA + P
Sbjct: 491 RERYR--QRSPSPAPAPAPAAAAGP 513
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 43.9 bits (102), Expect = 1e-04
Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 87 GAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPP 146
G R GP +G+ P+A PP A D S R PPPPPPP PP
Sbjct: 552 GCPRLGPAARGSLEGPSA-----PPQAALLPGNHVPNGCAADPKAS-RELPPPPPPPPPP 605
Query: 147 APTRHGNTDVRASQPI----AGCGRREGARWRG 175
P + P+ GCG+R + G
Sbjct: 606 LPEAASSPPPAPPLPLESAGPGCGQRRSSSSTG 638
Score = 30.0 bits (66), Expect = 1.5
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 3/19 (15%)
Query: 133 PRAWPPPPPPP---LPPAP 148
P ++PPPPPPP LPP P
Sbjct: 434 PPSFPPPPPPPGTQLPPPP 452
Score = 28.5 bits (62), Expect = 4.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 137 PPPPPPPLPPAPTRHG 152
PPPPPP PP P G
Sbjct: 430 PPPPPPSFPPPPPPPG 445
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.9 bits (102), Expect = 1e-04
Identities = 44/145 (30%), Positives = 58/145 (40%), Gaps = 15/145 (10%)
Query: 68 RSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVT 127
RSPSPS G + G R G G R A PP ++ PR A
Sbjct: 298 RSPSPSGGSGWGSPQRNGGSGQRSGAH--GGRPGSAHS----PPDKPSSPSPRVRDKAAA 351
Query: 128 DGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRGR 187
T P P P AP+ G R + G GRR R R R +R++++
Sbjct: 352 AAPTPPARGKESPSPR--SAPSSQG----RGGRAAGGAGRR---RRRRRRRRRSRSSASA 402
Query: 188 KKGRGVRRRKSPPPPLTPATLSRPR 212
+ RG RR + PP + +LSR R
Sbjct: 403 PRRRGRRRPRPAPPRGSSRSLSRAR 427
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 29/126 (23%)
Query: 110 PPHVAAAARPRAETAAVTDGVTSPRAWP---PPPPPPLPPAPTRHG-------------- 152
PP +R R+ ++ + PRA P PPPPP P AP G
Sbjct: 39 PPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSAS 98
Query: 153 NTDVRASQPIA------GCGRREGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPLTPA 206
++ V + P+ G GRR GAR R +A + R + + SPPPP P
Sbjct: 99 HSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRA----RAARAISNQSSPPPP--PP 152
Query: 207 TLSRPR 212
+ +R R
Sbjct: 153 SRARSR 158
Score = 30.4 bits (67), Expect = 1.2
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 114 AAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRR---EG 170
AA A PRA A +SP PPPP P+R + +R S P G R E
Sbjct: 128 AAPASPRARAARAISNQSSP------PPPP----PSRARSRSLRLSAP----GSRHDAEK 173
Query: 171 ARWRGRGQRQAKALRGRKKG 190
A R R +R+ + + GR G
Sbjct: 174 ASERNRLRRKKRLVLGRGGG 193
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 42.7 bits (99), Expect = 2e-04
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 29/126 (23%)
Query: 110 PPHVAAAARPRAETAAVTDGVTSPRAWP---PPPPPPLPPAPTRHG-------------- 152
PP +R R+ ++ + PRA P PPPPP P AP G
Sbjct: 39 PPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSAS 98
Query: 153 NTDVRASQPIA------GCGRREGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPLTPA 206
++ V + P+ G GRR GAR R +A + R + + SPPPP P
Sbjct: 99 HSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRA----RAARAISNQSSPPPP--PP 152
Query: 207 TLSRPR 212
+ +R R
Sbjct: 153 SRARSR 158
Score = 30.4 bits (67), Expect = 1.2
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 114 AAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRR---EG 170
AA A PRA A +SP PPPP P+R + +R S P G R E
Sbjct: 128 AAPASPRARAARAISNQSSP------PPPP----PSRARSRSLRLSAP----GSRHDAEK 173
Query: 171 ARWRGRGQRQAKALRGRKKG 190
A R R +R+ + + GR G
Sbjct: 174 ASERNRLRRKKRLVLGRGGG 193
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 42.4 bits (98), Expect = 3e-04
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 15/81 (18%)
Query: 139 PPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGR-GQRQAKA-----LRGRKKGRG 192
P PPP PP PT S PI G R RGR QA+ L + G
Sbjct: 22 PAPPPPPPPPT---------SGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSS 72
Query: 193 VRRRKSPPPPLTPATLSRPRG 213
RR+ PPPP P+T + RG
Sbjct: 73 SRRKPPPPPPAPPSTSAPGRG 93
Score = 31.6 bits (70), Expect = 0.53
Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 17/129 (13%)
Query: 64 PRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAET 123
P+Q +P+ R AP P P GP + G R+ A P+
Sbjct: 9 PKQPAAPAAER-CAPAP--PPPPPPPTSGP-IGGLRSRHRGSSRGRWAAAQAEVAPKTRL 64
Query: 124 AAVTDGVTSPRAWPPPPPPPLPP---APTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
++ G +S R PPPPPP PP AP R G G GR G G R
Sbjct: 65 SSPRGGSSSRRK--PPPPPPAPPSTSAPGRGGRG--------GGGGRTGGGGGGGHLART 114
Query: 181 AKALRGRKK 189
A R K
Sbjct: 115 TAARRAVNK 123
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 42.4 bits (98), Expect = 3e-04
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 15/81 (18%)
Query: 139 PPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGR-GQRQAKA-----LRGRKKGRG 192
P PPP PP PT S PI G R RGR QA+ L + G
Sbjct: 22 PAPPPPPPPPT---------SGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSS 72
Query: 193 VRRRKSPPPPLTPATLSRPRG 213
RR+ PPPP P+T + RG
Sbjct: 73 SRRKPPPPPPAPPSTSAPGRG 93
Score = 31.6 bits (70), Expect = 0.53
Identities = 38/129 (29%), Positives = 47/129 (36%), Gaps = 17/129 (13%)
Query: 64 PRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAET 123
P+Q +P+ R AP P P GP + G R+ A P+
Sbjct: 9 PKQPAAPAAER-CAPAP--PPPPPPPTSGP-IGGLRSRHRGSSRGRWAAAQAEVAPKTRL 64
Query: 124 AAVTDGVTSPRAWPPPPPPPLPP---APTRHGNTDVRASQPIAGCGRREGARWRGRGQRQ 180
++ G +S R PPPPPP PP AP R G G GR G G R
Sbjct: 65 SSPRGGSSSRRK--PPPPPPAPPSTSAPGRGGRG--------GGGGRTGGGGGGGHLART 114
Query: 181 AKALRGRKK 189
A R K
Sbjct: 115 TAARRAVNK 123
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 42.0 bits (97), Expect = 4e-04
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 67 ERSPSPSRWLAPGPWRG-MGPGAVREGPQVKGARTSPAA-IIALLPPHVAAAARPRAETA 124
E +P P L P P G + PG R P+ GA +P A + L A A
Sbjct: 1098 ETAPGP---LGPAPKNGTLEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGG 1154
Query: 125 AVTDGVTSPRAW-----PPPPPPPLPPAP 148
GV + W P PPPPPLPP P
Sbjct: 1155 GPGSGVDAKAGWVDNTRPQPPPPPLPPPP 1183
Score = 41.6 bits (96), Expect = 5e-04
Identities = 49/163 (30%), Positives = 57/163 (34%), Gaps = 36/163 (22%)
Query: 67 ERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAV 126
ER P W APGPW + P+ G PA I P + E A
Sbjct: 1045 ERPPETGPWRAPGPW--------EKTPESWG----PAPTIGEPAPETS------LERAPA 1086
Query: 127 TDGVTSPRAWPPPPPPPLPPAP---TRHGNTDVRASQPIAGCGRREGA-----RWRGRGQ 178
V S R P PL PAP T T+ RA + G R GA GR
Sbjct: 1087 PSAVVSSRNGGETAPGPLGPAPKNGTLEPGTERRAPE-TGGAPRAPGAGRLDLGSGGRAP 1145
Query: 179 RQAKALRGRKKGRGV---------RRRKSPPPPLTPATLSRPR 212
G G GV R + PPPPL P ++PR
Sbjct: 1146 VGTGTAPGGGPGSGVDAKAGWVDNTRPQPPPPPLPPPPEAQPR 1188
Score = 31.2 bits (69), Expect = 0.70
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 13/90 (14%)
Query: 124 AAVTDGVTSPRAWPPPP------PPPLP-----PAPTRHGNTDVRASQPIAGCGRREGAR 172
AA +GV PRA P PP PPP P P P V+ S RE
Sbjct: 841 AAEEEGVPRPRAPPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVT 900
Query: 173 WRGRGQRQAKALR--GRKKGRGVRRRKSPP 200
G++ A A RK GRG R+ P
Sbjct: 901 RNLLGEKGATARETGPRKAGRGPGNREKVP 930
Score = 30.4 bits (67), Expect = 1.2
Identities = 36/146 (24%), Positives = 48/146 (32%), Gaps = 16/146 (10%)
Query: 81 WRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPR------AETAAVTDGVTSPR 134
W G P+ + + +A LP A+A P A G P
Sbjct: 721 WGGHPALGCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPGRGPPP 780
Query: 135 AWPPPPPPPLPPA-PTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKALR-------- 185
A PPPPPPP PA P + + P +G G + G
Sbjct: 781 APPPPPPPPRAPADPAASPDPPSAVASPGSGLS-SPGPKPGDSGYETETPFSPEGAFPGG 839
Query: 186 GRKKGRGVRRRKSPPPPLTPATLSRP 211
G + GV R ++PP P P P
Sbjct: 840 GAAEEEGVPRPRAPPEPPDPGAPRPP 865
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 41.6 bits (96), Expect = 5e-04
Identities = 34/98 (34%), Positives = 37/98 (37%), Gaps = 14/98 (14%)
Query: 68 RSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVT 127
R PSP+ GPW PG R AR + A P AAA P
Sbjct: 72 RCPSPAAGGLRGPWTA-APGRQRADEGAAAARPERQRVWARRLPGSAAAPAP-------- 122
Query: 128 DGVTSPRAWPPPPPPP----LPPAPTRHGNTDVRASQP 161
G + R PPPPPPP LPPA G D P
Sbjct: 123 -GRDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPSP 159
Score = 31.2 bits (69), Expect = 0.70
Identities = 28/109 (25%), Positives = 37/109 (33%), Gaps = 17/109 (15%)
Query: 115 AAARPRAETAAVTDG--VTSPRAWPPPPPPPLPPAP---------------TRHGNTDVR 157
A RP ++ + + P PPPP P PP P T G+ R
Sbjct: 13 ARGRPHSQVSLARRAPLMFGPGLRDPPPPRPAPPRPGEEPGNRHPPPPAARTHPGSCRAR 72
Query: 158 ASQPIAGCGRREGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPLTPA 206
P AG R GR + A R + + V R+ P PA
Sbjct: 73 CPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPA 121
>gi|239754370 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 40.8 bits (94), Expect = 9e-04
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 45 ETRRGAAQMSADWGFALICPR---QERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTS 101
E+RR A + + F + Q+RSP+P+R+ A VR + + RT
Sbjct: 91 ESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKA-----------VRLAEREREVRTP 139
Query: 102 PAAIIALLPPHVAAAARPRAETAAV--TDGVTSPRAWPPPPPPPLPPAPTR 150
+P A AAR R ++ T +P AWP PPP P PP+ ++
Sbjct: 140 SGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAP-AWPAPPPCPAPPSRSK 189
>gi|239748924 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 40.8 bits (94), Expect = 9e-04
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 45 ETRRGAAQMSADWGFALICPR---QERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTS 101
E+RR A + + F + Q+RSP+P+R+ A VR + + RT
Sbjct: 91 ESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKA-----------VRLAEREREVRTP 139
Query: 102 PAAIIALLPPHVAAAARPRAETAAV--TDGVTSPRAWPPPPPPPLPPAPTR 150
+P A AAR R ++ T +P AWP PPP P PP+ ++
Sbjct: 140 SGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAP-AWPAPPPCPAPPSRSK 189
>gi|239742946 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 40.8 bits (94), Expect = 9e-04
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 45 ETRRGAAQMSADWGFALICPR---QERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTS 101
E+RR A + + F + Q+RSP+P+R+ A VR + + RT
Sbjct: 91 ESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKA-----------VRLAEREREVRTP 139
Query: 102 PAAIIALLPPHVAAAARPRAETAAV--TDGVTSPRAWPPPPPPPLPPAPTR 150
+P A AAR R ++ T +P AWP PPP P PP+ ++
Sbjct: 140 SGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAP-AWPAPPPCPAPPSRSK 189
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 40.4 bits (93), Expect = 0.001
Identities = 41/124 (33%), Positives = 49/124 (39%), Gaps = 26/124 (20%)
Query: 110 PPHVAAAARPRAE----TAAVTDGV-------TSPRAWPPPPPPPLPPAPTRH------- 151
PP AA A A AA GV TS RA PPPPPL P+ +
Sbjct: 4 PPATAATAAGGATGGGPQAARRSGVQGGQRNSTSARA---PPPPPLAPSSSSSSGSSGSS 60
Query: 152 -GNTDVRASQPIAGCGRREGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPLTPATLSR 210
G A QP G G+ R +R GR G +R R+ PPP L P + +
Sbjct: 61 GGGGSGSAGQPTLGSMLAVGSAARRASERAG----GRAGGTALRAREPPPPLLPPPSPPQ 116
Query: 211 PRGK 214
P K
Sbjct: 117 PGPK 120
Score = 34.7 bits (78), Expect = 0.063
Identities = 34/127 (26%), Positives = 45/127 (35%), Gaps = 32/127 (25%)
Query: 68 RSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPP---------------- 111
R+P + A G G GP A R G R S +A PP
Sbjct: 2 RAPPATAATAAGGATGGGPQAARRSGVQGGQRNSTSARAPPPPPLAPSSSSSSGSSGSSG 61
Query: 112 ----------------HVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTD 155
V +AAR +E A G T+ RA PPPP PP+P + G
Sbjct: 62 GGGSGSAGQPTLGSMLAVGSAARRASERAGGRAGGTALRAREPPPPLLPPPSPPQPGPKG 121
Query: 156 VRASQPI 162
+ +P+
Sbjct: 122 PASPRPL 128
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 40.4 bits (93), Expect = 0.001
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 44 AETRRGAAQMSADWGFALICPRQERSPSPSRWLAPGPWRGMGPGAVREGPQVK-GARTSP 102
A +RR A +M + P QER P+P L W G G + P + +S
Sbjct: 47 ASSRREAEEMKLE-------PLQEREPAPEENLT---WSSSG-GDEKVLPSIPLRCHSSS 95
Query: 103 AAIIALLPPHVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTR 150
+ + P R R+ + P A PPPPPPP PP R
Sbjct: 96 SPVCPRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPR 143
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/140 (30%), Positives = 48/140 (34%), Gaps = 10/140 (7%)
Query: 64 PRQERSPSPSRWLAPGPWRGMGPGAVRE------GPQVKGARTSPAAIIALLPPHVAA-- 115
P P P+ A P R A GP G R AA +A PP AA
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPP 188
Query: 116 AARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQ-PIAGCGRREGARWR 174
A P A + R PP PPPP PPAP + Q P G R G R
Sbjct: 189 AVAPPAGPRRAPPPAVAARE-PPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAAR 247
Query: 175 GRGQRQAKALRGRKKGRGVR 194
R+ G G G R
Sbjct: 248 PVSLREVVRYLGGSGGAGGR 267
Score = 32.7 bits (73), Expect = 0.24
Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 13/106 (12%)
Query: 110 PPHVAAA--ARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGR 167
PP A A PRA A + A PP P PP PPAP V A+ P
Sbjct: 101 PPRRGATPPAPPRAPRGA--PAAAAAAAPPPTPAPPPPPAP-------VAAAAPAR--AP 149
Query: 168 REGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPLTPATLSRPRG 213
R A A G + R PP P P ++ P G
Sbjct: 150 RAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Score = 32.7 bits (73), Expect = 0.24
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 13/76 (17%)
Query: 86 PGAVREGPQVKGARTSPAAIIALLPPHVAAAA----RPRAETAAVT---------DGVTS 132
P A R P A P PP AAA PRA AA T G +
Sbjct: 112 PRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRA 171
Query: 133 PRAWPPPPPPPLPPAP 148
RA P PPP P AP
Sbjct: 172 QRAAPLAAPPPAPAAP 187
Score = 30.4 bits (67), Expect = 1.2
Identities = 38/133 (28%), Positives = 41/133 (30%), Gaps = 21/133 (15%)
Query: 80 PWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPRAW--- 136
P RG P A P R +PAA A PP A P A AA +PRA
Sbjct: 102 PRRGATPPAPPRAP-----RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPA-RAPRAAAAA 155
Query: 137 ---PPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRGRKKGRGV 193
PP P P P P + A P A R
Sbjct: 156 ATAPPSP-GPAQPGPRAQRAAPLAAPPPAPAAPPAVAP--------PAGPRRAPPPAVAA 206
Query: 194 RRRKSPPPPLTPA 206
R PPPP PA
Sbjct: 207 REPPLPPPPQPPA 219
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 68 RSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPP-----HVAAAARPRAE 122
++P P R LAP P P + P AR P+ A PP + A A P
Sbjct: 286 KTPGPVRGLAPPPPTSASPSLLSNRPPPP-ARDPPSRGAAPPPPPPVIRNGARDAPPPPP 344
Query: 123 TAAVTDGVTSPRAWPPPPP-------PPLPPAPTRHGNTD 155
+ R PPPPP PP PP P R+G+ D
Sbjct: 345 PYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRD 384
Score = 32.3 bits (72), Expect = 0.31
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 17/79 (21%)
Query: 137 PPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRGR--KKGRGVR 194
PPPPPP PP PT H QP + RGRG +G KK +
Sbjct: 6 PPPPPPGPPPPPTFH---QANTEQP-----KLSRDEQRGRGALLQDICKGTKLKKVTNIN 57
Query: 195 RRKSPPPPLTPATLSRPRG 213
R +P L +P+G
Sbjct: 58 DRSAP-------ILEKPKG 69
Score = 29.3 bits (64), Expect = 2.6
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 12/95 (12%)
Query: 70 PSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDG 129
P+P + L PG P V+ P RT P+ PP P + V +G
Sbjct: 211 PTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPP------PPYRQPPGVPNG 264
Query: 130 VTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAG 164
+S P P P RH + + P+ G
Sbjct: 265 PSS------PTNESAPELPQRHNSLHRKTPGPVRG 293
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 39.7 bits (91), Expect = 0.002
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 65 RQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRA-ET 123
R+ + P+P+R P P QV G+R+SP A LPP + P+A
Sbjct: 563 RRTKRPAPARPTMPPP-------------QVSGSRSSPPA--PPLPPGSGSPGTPQALPR 607
Query: 124 AAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCG 166
V + +P PPP PP PP P R + AS A G
Sbjct: 608 RLVGSSLRAPTV--PPPLPPTPPQPARRQSRRSPASPSPASPG 648
Score = 32.7 bits (73), Expect = 0.24
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 25/154 (16%)
Query: 64 PRQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAA--AARPRA 121
P +P+P+ AP P + A +E + + +PP A+ R
Sbjct: 505 PTPATTPAPAPAPAPAPAPALASAATKERTESE------------VPPRPASPKVTRSPP 552
Query: 122 ETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQA 181
ETAA + + P P P +PP P G+ + P+ G
Sbjct: 553 ETAAPVEDMARRTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGT---------P 602
Query: 182 KALRGRKKGRGVRRRKSPPP-PLTPATLSRPRGK 214
+AL R G +R PPP P TP +R + +
Sbjct: 603 QALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSR 636
>gi|54792090 hypothetical protein LOC23351 [Homo sapiens]
Length = 678
Score = 39.3 bits (90), Expect = 0.003
Identities = 56/207 (27%), Positives = 78/207 (37%), Gaps = 22/207 (10%)
Query: 5 APAWGVSSLPQRGSEPRSTFSSGACVTARDRRRVRFGVGAETRRGAAQMSADWGFALICP 64
A GV + P G E T S G R R + V E + DWG+ + P
Sbjct: 219 AQCQGVRAPPSDGRESLDTGSMGPG-DCRGARGDTYAVEKEGGKQGGPREMDWGWKEL-P 276
Query: 65 RQERSPSPSRWLAPGPWRGMGPGAVREGPQVKGARTSPAAI--------IALLPP----- 111
+E + R +A P + +G GA RE +KG I + PP
Sbjct: 277 GEE---AWEREVALRP-QSVGGGA-RESAPLKGKALGKEEIALGGGGFCVHREPPGAHGS 331
Query: 112 -HVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREG 170
H AA +R + + +G SP P PPP P PP D + G ++
Sbjct: 332 CHRAAQSRGASLLQRLHNGNASPPRVPSPPPAPEPPWHC-GDRGDCGDRGDVGDRGDKQQ 390
Query: 171 ARWRGRGQRQAKALRGRKKGRGVRRRK 197
RGRG + + RG G +R K
Sbjct: 391 GMARGRGPQWKRGARGGNLVTGTQRFK 417
>gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 38.9 bits (89), Expect = 0.003
Identities = 37/114 (32%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 107 ALLPPHVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCG 166
AL H A R AA +P AW P P P P R + +R +
Sbjct: 46 ALTTNHQAPGPHARPRQAARPPQAFAPTAWAPALASPAPDTP-RPRDAQLRPEKAGRDLA 104
Query: 167 R--------REGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPLTPATLSRPR 212
R R GAR R RQA G + G G+ RR P PP+ ATL R +
Sbjct: 105 RDVENPPPLRGGARSRCGESRQAGG--GARAGSGLPRR-MPRPPIAFATLERAK 155
>gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 38.9 bits (89), Expect = 0.003
Identities = 37/114 (32%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 107 ALLPPHVAAAARPRAETAAVTDGVTSPRAWPPPPPPPLPPAPTRHGNTDVRASQPIAGCG 166
AL H A R AA +P AW P P P P R + +R +
Sbjct: 46 ALTTNHQAPGPHARPRQAARPPQAFAPTAWAPALASPAPDTP-RPRDAQLRPEKAGRDLA 104
Query: 167 R--------REGARWRGRGQRQAKALRGRKKGRGVRRRKSPPPPLTPATLSRPR 212
R R GAR R RQA G + G G+ RR P PP+ ATL R +
Sbjct: 105 RDVENPPPLRGGARSRCGESRQAGG--GARAGSGLPRR-MPRPPIAFATLERAK 155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,549,066
Number of Sequences: 37866
Number of extensions: 818835
Number of successful extensions: 18471
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 899
Number of HSP's that attempted gapping in prelim test: 9594
Number of HSP's gapped (non-prelim): 5976
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.