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Search of human proteins with 19924141
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19924141 like-glycosyltransferase [Homo sapiens]
(756 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19924141 like-glycosyltransferase [Homo sapiens] 1545 0.0
gi|4758664 like-glycosyltransferase [Homo sapiens] 1545 0.0
gi|116235482 glycosyltransferase-like 1B [Homo sapiens] 940 0.0
gi|5802984 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans... 118 2e-26
gi|112181295 hypothetical protein LOC152002 [Homo sapiens] 73 1e-12
gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2... 68 3e-11
gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1... 68 4e-11
gi|122937187 glycosyltransferase 8 domain containing 4 [Homo sap... 54 4e-07
gi|19924145 T-cell, immune regulator 1 isoform a [Homo sapiens] 35 0.26
gi|4557779 myocilin [Homo sapiens] 33 0.75
gi|21359846 prospero homeobox 1 [Homo sapiens] 33 0.75
gi|31377750 YTH domain family, member 1 [Homo sapiens] 33 0.98
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 32 2.8
gi|41152093 zinc finger protein 644 isoform 1 [Homo sapiens] 32 2.8
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 31 3.7
gi|9910280 UDP-glucose ceramide glucosyltransferase-like 1 [Homo... 31 4.9
gi|34577120 mitochondrial translational release factor 1 [Homo s... 31 4.9
gi|62177129 Nedd4 binding protein 3 [Homo sapiens] 31 4.9
gi|239752789 PREDICTED: similar to ATPase, H+ transporting, lyso... 30 6.3
gi|239747332 PREDICTED: hypothetical protein XP_002346425 [Homo ... 30 6.3
gi|239741157 PREDICTED: hypothetical protein XP_002342123 [Homo ... 30 6.3
gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 30 6.3
gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 30 6.3
gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 30 6.3
gi|221136866 WD repeat domain 79 isoform 4 [Homo sapiens] 30 6.3
gi|221136862 WD repeat domain 79 isoform 3 [Homo sapiens] 30 6.3
gi|221136858 WD repeat domain 79 isoform 2 [Homo sapiens] 30 6.3
gi|221136854 WD repeat domain 79 isoform 1 [Homo sapiens] 30 6.3
gi|5032055 reticulon 2 isoform A [Homo sapiens] 30 6.3
gi|46255005 reticulon 2 isoform B [Homo sapiens] 30 6.3
>gi|19924141 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 1545 bits (4000), Expect = 0.0
Identities = 756/756 (100%), Positives = 756/756 (100%)
Query: 1 MLGICRGRRKFLAASLSLLCIPAITWIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQR 60
MLGICRGRRKFLAASLSLLCIPAITWIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQR
Sbjct: 1 MLGICRGRRKFLAASLSLLCIPAITWIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQR 60
Query: 61 ERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVA 120
ERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVA
Sbjct: 61 ERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVA 120
Query: 121 GNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQ 180
GNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQ
Sbjct: 121 GNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQ 180
Query: 181 ILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIV 240
ILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIV
Sbjct: 181 ILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIV 240
Query: 241 LDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVI 300
LDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVI
Sbjct: 241 LDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVI 300
Query: 301 LLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQL 360
LLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQL
Sbjct: 301 LLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQL 360
Query: 361 SDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCP 420
SDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCP
Sbjct: 361 SDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCP 420
Query: 421 SEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLVAQL 480
SEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLVAQL
Sbjct: 421 SEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLVAQL 480
Query: 481 SMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQF 540
SMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQF
Sbjct: 481 SMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQF 540
Query: 541 YPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETL 600
YPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETL
Sbjct: 541 YPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETL 600
Query: 601 RYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPY 660
RYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPY
Sbjct: 601 RYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPY 660
Query: 661 VVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSN 720
VVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSN
Sbjct: 661 VVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSN 720
Query: 721 KQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS 756
KQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS
Sbjct: 721 KQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS 756
>gi|4758664 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 1545 bits (4000), Expect = 0.0
Identities = 756/756 (100%), Positives = 756/756 (100%)
Query: 1 MLGICRGRRKFLAASLSLLCIPAITWIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQR 60
MLGICRGRRKFLAASLSLLCIPAITWIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQR
Sbjct: 1 MLGICRGRRKFLAASLSLLCIPAITWIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQR 60
Query: 61 ERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVA 120
ERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVA
Sbjct: 61 ERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVA 120
Query: 121 GNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQ 180
GNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQ
Sbjct: 121 GNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQ 180
Query: 181 ILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIV 240
ILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIV
Sbjct: 181 ILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIV 240
Query: 241 LDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVI 300
LDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVI
Sbjct: 241 LDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVI 300
Query: 301 LLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQL 360
LLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQL
Sbjct: 301 LLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQL 360
Query: 361 SDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCP 420
SDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCP
Sbjct: 361 SDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCP 420
Query: 421 SEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLVAQL 480
SEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLVAQL
Sbjct: 421 SEADVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYEPAADSTDVTLVAQL 480
Query: 481 SMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQF 540
SMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQF
Sbjct: 481 SMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQF 540
Query: 541 YPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETL 600
YPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETL
Sbjct: 541 YPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETL 600
Query: 601 RYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPY 660
RYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPY
Sbjct: 601 RYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPY 660
Query: 661 VVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSN 720
VVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSN
Sbjct: 661 VVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSN 720
Query: 721 KQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS 756
KQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS
Sbjct: 721 KQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS 756
>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
Length = 721
Score = 940 bits (2429), Expect = 0.0
Identities = 448/666 (67%), Positives = 535/666 (80%), Gaps = 11/666 (1%)
Query: 89 RAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQPVVE-KCETIHVAIVCAGY 147
R P R + + G G ++ N S+CG QP KCE +HVAIVCAG+
Sbjct: 55 RVPPDGRLRRAAALDGDPGAGPGDH--------NRSDCGPQPPPPPKCELLHVAIVCAGH 106
Query: 148 NASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNADELKSE 207
N+SRDV+TLVKS+LF+R+NPLH HL+ D++A IL TLF TWMVPAVRV FY+AD+LK +
Sbjct: 107 NSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQ 166
Query: 208 VSWIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVL 267
VSWIPNKHYSG+YGLMKLVL LPA L RVIVLDTD+TFA+DI+ELWA+F F Q +
Sbjct: 167 VSWIPNKHYSGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAI 226
Query: 268 GLVENQSDWYLGNLWKNHRPWPALGRGYNTGVILLLLDKLRKMKWEQMWRLTAERELMGM 327
GLVENQSDWYLGNLWKNHRPWPALGRG+NTGVILL LD+LR+ WEQMWRLTA REL+ +
Sbjct: 227 GLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSL 286
Query: 328 LSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKL 387
+TSLADQDIFNAVIK++P LV +LPC WNVQLSDHT +E+CY + SDLKVIHWNSPKKL
Sbjct: 287 PATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKL 346
Query: 388 RVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSEADVNSENLQKQLSELDEDDLCYEFR 447
RVKNKHVEFFRN YLTFLEYDGNLLRRELF CPS+ +E LQ+ L++LDE+D C+EFR
Sbjct: 347 RVKNKHVEFFRNFYLTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFR 406
Query: 448 RERFTVHRTHLYFLHYEYEPAADSTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSD 507
+++ TVHR H+ FL +E P DVTLVAQLSMDRLQMLEA+C+HW GP+SLALYL+D
Sbjct: 407 QQQLTVHRVHVTFLPHE-PPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTD 465
Query: 508 AEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQFYPVNLLRNVAMKHISTPYMFLSDIDFL 567
AEAQQFL + + S VL +R +V YH+VY+EG YPVN LRNVA+ TPY+FLSDIDFL
Sbjct: 466 AEAQQFLHFVEASPVLAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFL 525
Query: 568 PMYGLYEYLRKSVIQLDLANTKK-AMIVPAFETLRYRLSFPKSKAELLSMLDMGTLFTFR 626
P Y LY+YLR S+ QL L + +K A++VPAFETLRYR SFP SK ELL++LD GTL+TFR
Sbjct: 526 PAYSLYDYLRASIEQLGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFR 585
Query: 627 YHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPYVVVRRDCPEYDRRFVGFGWNKVAHIM 686
YH W +GHAPT++A+WR A PYRV+W A++EPYVVV RDCP YD RFVGFGWNKVAHI+
Sbjct: 586 YHEWPRGHAPTDYARWREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIV 645
Query: 687 ELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSNKQYRICLKTLKEEFQQDMSRRYGFAA 746
ELD QEYE +VLP A+ IH+PHAPS DI++FRS+ YR CL+ LK+EF QD+SR +G AA
Sbjct: 646 ELDAQEYELLVLPEAFTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAA 705
Query: 747 LKYLTA 752
LKYL A
Sbjct: 706 LKYLPA 711
>gi|5802984 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 1 [Homo
sapiens]
Length = 415
Score = 118 bits (296), Expect = 2e-26
Identities = 93/328 (28%), Positives = 146/328 (44%), Gaps = 65/328 (19%)
Query: 470 DSTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQF---LRYAQGSEVLMSR 526
D DV L S+D L L + + WEGP+S++++ + E Q L YA S R
Sbjct: 91 DPNDVILATHASVDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMR 150
Query: 527 HNVGYHIVY------------KEGQF------------------------------YPVN 544
V H+V + G+F YP N
Sbjct: 151 ARVAMHLVCPSRYEAAVPDPREPGEFALLRSCQEVFDKLARVAQPGINYALGTNVSYPNN 210
Query: 545 LLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANT--KKAMIVPAFETLRY 602
LLRN+A + + Y + D+D +P GL+ LR+ LD +N A++VPAFE R
Sbjct: 211 LLRNLAREGAN--YALVIDVDMVPSEGLWRGLRE---MLDQSNQWGGTALVVPAFEIRRA 265
Query: 603 RLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKW------RTATTPYRVEWEAD 656
R P +K EL+ + +G + F Y + T APTN+++W Y V W+
Sbjct: 266 R-RMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDP 324
Query: 657 FEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDVQEYEFIVLPNAYMIH--MPHAPSFDI 714
+EP+ V P +D RF +G+N+++ EL V ++F VL +++H A F
Sbjct: 325 WEPFYVAGGKVPTFDERFRQYGFNRISQACELHVAGFDFEVLNEGFLVHKGFKEALKFHP 384
Query: 715 TKFRSNKQYRICLKTLKEEFQQDMSRRY 742
K N+ +I L +F+Q++ +Y
Sbjct: 385 QKEAENQHNKI----LYRQFKQELKAKY 408
>gi|112181295 hypothetical protein LOC152002 [Homo sapiens]
Length = 393
Score = 72.8 bits (177), Expect = 1e-12
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 42/266 (15%)
Query: 155 TLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAV----RVDFYNADELKSEVSW 210
+L++ F L+ H +++ + ++ L + + PA +V F++ L ++
Sbjct: 124 SLLRLAKFEAHEVLNLHFVSEEASREVAKGLLRELLPPAAGFKCKVIFHDVAVLTDKLFP 183
Query: 211 IPN---KHYSGIYG--------LMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFH 259
I KH+S G + + + + +P + ++I LD D+ F T+I EL+ F
Sbjct: 184 IVEAMQKHFSAGLGTYYSDSIFFLSVAMHQIMPKEILQIIQLDLDLKFKTNIRELFEEFD 243
Query: 260 KFKGQQVLGLVENQSDWYLGNLW--KNHRPWPALG-------RGYNTGVILLLLDKLRK- 309
F ++G+ Y W ++ P +G G+N+GV+LL L+ +R+
Sbjct: 244 SFLPGAIIGIAREMQPVYRHTFWQFRHENPQTRVGGPPPEGLPGFNSGVMLLNLEAMRQS 303
Query: 310 ------MKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQL--- 360
++ Q+ +L + G L DQD F + ++P L + L C WN QL
Sbjct: 304 PLYSRLLEPAQVQQLADKYHFRG----HLGDQDFFTMIGMEHPKLFHVLDCTWNRQLCTW 359
Query: 361 -SDHTRS---EQCYRDVSDLKVIHWN 382
DH S E +R +K+ H N
Sbjct: 360 WRDHGYSDVFEAYFRCEGHVKIYHGN 385
>gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2
[Homo sapiens]
Length = 409
Score = 68.2 bits (165), Expect = 3e-11
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 53/300 (17%)
Query: 103 SMEEGTGDSEN-----------------LRAGIVAGNSSECGQQP----VVEKCETIHVA 141
S+EEGTG +R VAG ++ G ++ E +H+A
Sbjct: 29 SLEEGTGGGGGKPQAAVASWLAGGGRGAVRGAGVAGPAAHPGVSDRYSLKIQPVEKMHLA 88
Query: 142 IVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNA 201
+V G + +T++KS + PL FH+ A+ W F
Sbjct: 89 VVACGERLE-ETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNW-------SFLQT 140
Query: 202 DELKSEVSWIPNKHYSGIYGLMKLVLTKTL--PANLERV---IVLDTDITFATDIAELWA 256
P+++ + L K ++ L P L+ V + +DTDI F + ++W+
Sbjct: 141 FNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDILFLRPVDDIWS 200
Query: 257 VFHKFKGQQVLGLVENQSD----WYLGNLWKNHRPWPALGR-GYNTGVILLLLDKLRKMK 311
+ KF Q+ + + WY N + H P G+ G N+GV+L+ + ++R+
Sbjct: 201 LLKKFNSTQIAAMAPEHEEPRIGWY--NRFARH---PYYGKTGVNSGVMLMNMTRMRRKY 255
Query: 312 WEQMW---RLTAERELMGML-----STSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDH 363
++ RL LM +L + + DQD+ N V NP ++ PC WN + DH
Sbjct: 256 FKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFPCQWNYR-PDH 314
>gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1
[Homo sapiens]
Length = 440
Score = 67.8 bits (164), Expect = 4e-11
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 32/250 (12%)
Query: 132 VEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMV 191
++ E +H+A+V G + +T++KS + PL FH+ A+ W
Sbjct: 110 IQPVEKMHLAVVACGERLE-ETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNW-- 166
Query: 192 PAVRVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTL--PANLERV---IVLDTDIT 246
F P+++ + L K ++ L P L+ V + +DTDI
Sbjct: 167 -----SFLQTFNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILKEVDSLLYVDTDIL 221
Query: 247 FATDIAELWAVFHKFKGQQVLGLVENQSD----WYLGNLWKNHRPWPALGR-GYNTGVIL 301
F + ++W++ KF Q+ + + WY N + H P G+ G N+GV+L
Sbjct: 222 FLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRIGWY--NRFARH---PYYGKTGVNSGVML 276
Query: 302 LLLDKLRKMKWEQMW---RLTAERELMGML-----STSLADQDIFNAVIKQNPFLVYQLP 353
+ + ++R+ ++ RL LM +L + + DQD+ N V NP ++ P
Sbjct: 277 MNMTRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNITWGDQDLLNIVFFHNPESLFVFP 336
Query: 354 CFWNVQLSDH 363
C WN + DH
Sbjct: 337 CQWNYR-PDH 345
>gi|122937187 glycosyltransferase 8 domain containing 4 [Homo
sapiens]
Length = 443
Score = 54.3 bits (129), Expect = 4e-07
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 28/263 (10%)
Query: 138 IHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVD 197
IH+A+V G +V L +VLF R + FH+ + + + W +
Sbjct: 110 IHLAVVACGNRLEETLVMLKSAVLFSHRK-IQFHIFTEDSLKPEFDKQLRQWPDSYTKKF 168
Query: 198 FYNADELKSEVS----WIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAE 253
+ + V W L V+ K +++ ++ +DTD+ F + +
Sbjct: 169 EHRIYPITFSVGNPQEWKKLFKPCAAQRLFLPVILK----DVDSLLYVDTDVLFLRPVDD 224
Query: 254 LWAVFHKFKGQQVLGLVENQS----DWYLGNLWKNHRPWPALGR-GYNTGVILLLLDKLR 308
+W + F Q+ + WY + + H P G G N+GV+L+ L ++R
Sbjct: 225 IWKLLRLFNSTQLAAMAPEHEIPKIGWY--SRFARH---PFYGSAGVNSGVMLMNLTRIR 279
Query: 309 KMKWEQMWRLT--AERELMGML------STSLADQDIFNAVIKQNPFLVYQLPCFWNVQL 360
+++ T A +++ L + + DQD+ N + NP +Y PC WN +
Sbjct: 280 STQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRP 339
Query: 361 SDHTRSEQCYR-DVSDLKVIHWN 382
C + + V+H N
Sbjct: 340 DHCMYGSNCREAEHEGVSVLHGN 362
>gi|19924145 T-cell, immune regulator 1 isoform a [Homo sapiens]
Length = 830
Score = 35.0 bits (79), Expect = 0.26
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 49 AHSPRYTASSQRERESLEVRMREVEEENRALRRQLS--------LAQGRAP----SHRRG 96
A PR Q E E L +R+V +ALR QL L QG P +H G
Sbjct: 88 APPPRDLLRIQEETERLAQELRDVRGNQQALRAQLHQLQLHAAVLRQGHEPQLAAAHTDG 147
Query: 97 NHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQPVVEK 134
+T ++ G ++LR VAG + E + P +E+
Sbjct: 148 ASERTPLLQAPGGPHQDLRVNFVAG-AVEPHKAPALER 184
>gi|4557779 myocilin [Homo sapiens]
Length = 504
Score = 33.5 bits (75), Expect = 0.75
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 44 PLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNHSKTYS 103
P E+Q R + +RER+ LE + RE+E L R S+ + R+ N +
Sbjct: 110 PQETQEGLQRELGTLRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARR 169
Query: 104 MEEGTGDSENLRAG 117
+E + + LR G
Sbjct: 170 LESSSQEVARLRRG 183
>gi|21359846 prospero homeobox 1 [Homo sapiens]
Length = 737
Score = 33.5 bits (75), Expect = 0.75
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 39 PVSLSPLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLSLAQGRAPSHRRGNH 98
P S+SP ES + R Q++++S + + +E+ R RRQL R
Sbjct: 195 PQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLKQQLEDMQKQLRQLQ 254
Query: 99 SKTYSMEEGTGDSENLRAGIVAGNS 123
K Y + + T DSEN G ++ +S
Sbjct: 255 EKFYQIYDST-DSENDEDGNLSEDS 278
>gi|31377750 YTH domain family, member 1 [Homo sapiens]
Length = 559
Score = 33.1 bits (74), Expect = 0.98
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 32 GSFEDGKPVSLSPLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLSLAQGRAP 91
G++++ PV +P+ QA SP+ Q+ + L + + + +Q + AP
Sbjct: 272 GTWDNKGPVPKAPVPQQAPSPQAAPQPQQVAQPLPAQPPALAQPQYQSPQQPPQTRWVAP 331
Query: 92 SHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQPVVEKCETIH 139
+R + G G N + ++ PV+EK + H
Sbjct: 332 RNRNA----AFGQSGGAGSDSNSPGNVQPNSAPSVESHPVLEKLKAAH 375
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 31.6 bits (70), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 38 KPVSLSPL-------ESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQ 82
+P+SL L E P++ + ++RE E+L+ R +EVEE R L +
Sbjct: 140 QPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEE 191
>gi|41152093 zinc finger protein 644 isoform 1 [Homo sapiens]
Length = 1327
Score = 31.6 bits (70), Expect = 2.8
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 21/145 (14%)
Query: 42 LSPLESQAHSPRYTASSQRERESLEV--RMREVEEENRALRRQLSL-AQGRAPSHRRGNH 98
+S ES H P+ +S ++ +L + + + + EN Q SL AP+
Sbjct: 49 ISDKESGVHKPKDCQTSFQKNNTLTLPEELSKDKSENALSGGQSSLFIHAGAPTVS---- 104
Query: 99 SKTYSMEEGTG-----------DSENLRAGIVAGNSSECGQQPVVEKCETIHVAI---VC 144
S+ + + +G + N+ G V+ + + QP E C T+ VA +
Sbjct: 105 SENFILPKGAAVNGPVSHSSLTKTSNMNKGSVSLTTGQPVDQPTTESCSTLKVAADLQLS 164
Query: 145 AGYNASRDVVTLVKSVLFHRRNPLH 169
AS+ V + S + H +NP H
Sbjct: 165 TPQKASQHQVLFLLSDVAHAKNPTH 189
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 31.2 bits (69), Expect = 3.7
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 59 QRERESLEVRMREVEEENRALRRQLSLAQGR 89
+R + S E RM++VE+EN+AL + ++ A G+
Sbjct: 575 ERSQVSSEARMKDVEKENKALHQTVTEANGK 605
>gi|9910280 UDP-glucose ceramide glucosyltransferase-like 1 [Homo
sapiens]
Length = 1555
Score = 30.8 bits (68), Expect = 4.9
Identities = 58/269 (21%), Positives = 105/269 (39%), Gaps = 33/269 (12%)
Query: 104 MEEGTGDSEN-----LRAGIVAGNSSECGQQPVVEKCETIHVAIVCAGYNASRDVVTLVK 158
+ +GT ++E+ + G + E Q +K + I++ V +G+ R + ++
Sbjct: 1221 LSDGTSENESGFWDSFKWGFTGQKTEEVKQ----DKDDIINIFSVASGHLYERFLRIMML 1276
Query: 159 SVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSG 218
SVL + + P+ F + + L+ F+ ++ + YN + W H
Sbjct: 1277 SVLKNTKTPVKFWFL-----KNYLSPTFKEFI--PYMANEYNFQYELVQYKWPRWLHQQT 1329
Query: 219 -----IYGLMKLVLTKTLPANLERVIVLDTDITFATDIAEL--WAVFHKFKGQQVLGLVE 271
I+G L L P +++ + +D D TD+ EL + + G
Sbjct: 1330 EKQRIIWGYKILFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPYGYTPFCDSR 1389
Query: 272 NQSDWY---LGNLWKNHRPWPALGRGYNTGVILLL-LDKLRKMKWEQMWRLTAERELMGM 327
+ D Y W +H GR Y+ + ++ L K RK+ R +
Sbjct: 1390 REMDGYRFWKSGYWASH----LAGRKYHISALYVVDLKKFRKIAAGDRLRGQYQGLSQDP 1445
Query: 328 LSTSLADQDIFNAVIKQNPFLVYQLPCFW 356
S S DQD+ N +I Q P + LP W
Sbjct: 1446 NSLSNLDQDLPNNMIHQVP--IKSLPQEW 1472
>gi|34577120 mitochondrial translational release factor 1 [Homo
sapiens]
Length = 445
Score = 30.8 bits (68), Expect = 4.9
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 410 NLLRRELFGC--PSEA-DVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEYE 466
N+L ELF P E D N L+ D+C +F RE F +++ + + H+++E
Sbjct: 164 NMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFE 223
>gi|62177129 Nedd4 binding protein 3 [Homo sapiens]
Length = 544
Score = 30.8 bits (68), Expect = 4.9
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 55 TASSQRERESLEVRMREVEEENRALRRQLSLAQGRAPSHR 94
T ++R +L++++ ++E R LR++L QG AP R
Sbjct: 309 TQKAERSERNLQLQLFMAQQEQRRLRKELRAQQGLAPEPR 348
>gi|239752789 PREDICTED: similar to ATPase, H+ transporting,
lysosomal 9kDa, V0 subunit e1 [Homo sapiens]
Length = 191
Score = 30.4 bits (67), Expect = 6.3
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 217 SGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLG-LVENQSD 275
S +G + ++ +P +L RV+++ +T + W V F + G ++N++
Sbjct: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
Query: 276 WYLGNLW 282
WYL + W
Sbjct: 184 WYLRHHW 190
>gi|239747332 PREDICTED: hypothetical protein XP_002346425 [Homo
sapiens]
Length = 191
Score = 30.4 bits (67), Expect = 6.3
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 217 SGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLG-LVENQSD 275
S +G + ++ +P +L RV+++ +T + W V F + G ++N++
Sbjct: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
Query: 276 WYLGNLW 282
WYL + W
Sbjct: 184 WYLRHHW 190
>gi|239741157 PREDICTED: hypothetical protein XP_002342123 [Homo
sapiens]
Length = 191
Score = 30.4 bits (67), Expect = 6.3
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 217 SGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLG-LVENQSD 275
S +G + ++ +P +L RV+++ +T + W V F + G ++N++
Sbjct: 124 SMFWGFLSFLVPWFIPKSLSRVVIITILVTCSVCCYLFWLVAILFHFCPLFGPQLKNETS 183
Query: 276 WYLGNLW 282
WYL + W
Sbjct: 184 WYLRHHW 190
>gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens]
Length = 520
Score = 30.4 bits (67), Expect = 6.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 53 RYTASSQRERESLEVRMREVEEENRALRRQLSLAQGRAP---SHRRGNHSKTYSMEEG 107
R+ AS ++E E R RE EE R S + + SHRR H K+ +EG
Sbjct: 443 RHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEG 500
>gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens]
Length = 588
Score = 30.4 bits (67), Expect = 6.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 53 RYTASSQRERESLEVRMREVEEENRALRRQLSLAQGRAP---SHRRGNHSKTYSMEEG 107
R+ AS ++E E R RE EE R S + + SHRR H K+ +EG
Sbjct: 511 RHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEG 568
>gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens]
Length = 594
Score = 30.4 bits (67), Expect = 6.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 53 RYTASSQRERESLEVRMREVEEENRALRRQLSLAQGRAP---SHRRGNHSKTYSMEEG 107
R+ AS ++E E R RE EE R S + + SHRR H K+ +EG
Sbjct: 517 RHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEG 574
>gi|221136866 WD repeat domain 79 isoform 4 [Homo sapiens]
Length = 548
Score = 30.4 bits (67), Expect = 6.3
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 31 SGSFEDGKPVSLS-PLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLS----L 85
S +G PVSLS PLE++ SP + E+E E EE N +L + + L
Sbjct: 64 SQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANGPEL 123
Query: 86 AQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQP 130
G+A G + + S + ++G+ SE QP
Sbjct: 124 GSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQP 168
>gi|221136862 WD repeat domain 79 isoform 3 [Homo sapiens]
Length = 548
Score = 30.4 bits (67), Expect = 6.3
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 31 SGSFEDGKPVSLS-PLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLS----L 85
S +G PVSLS PLE++ SP + E+E E EE N +L + + L
Sbjct: 64 SQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANGPEL 123
Query: 86 AQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQP 130
G+A G + + S + ++G+ SE QP
Sbjct: 124 GSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQP 168
>gi|221136858 WD repeat domain 79 isoform 2 [Homo sapiens]
Length = 548
Score = 30.4 bits (67), Expect = 6.3
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 31 SGSFEDGKPVSLS-PLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLS----L 85
S +G PVSLS PLE++ SP + E+E E EE N +L + + L
Sbjct: 64 SQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANGPEL 123
Query: 86 AQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQP 130
G+A G + + S + ++G+ SE QP
Sbjct: 124 GSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQP 168
>gi|221136854 WD repeat domain 79 isoform 1 [Homo sapiens]
Length = 548
Score = 30.4 bits (67), Expect = 6.3
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 31 SGSFEDGKPVSLS-PLESQAHSPRYTASSQRERESLEVRMREVEEENRALRRQLS----L 85
S +G PVSLS PLE++ SP + E+E E EE N +L + + L
Sbjct: 64 SQELREGDPVSLSTPLETEFGSPSELSPRIEEQELSENTSLPAEEANGSLSEEEANGPEL 123
Query: 86 AQGRAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQP 130
G+A G + + S + ++G+ SE QP
Sbjct: 124 GSGKAMEDTSGEPAAEDEGDTAWNYSFSQLPRFLSGSWSEFSTQP 168
>gi|5032055 reticulon 2 isoform A [Homo sapiens]
Length = 545
Score = 30.4 bits (67), Expect = 6.3
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 26 WIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQRERESLEVRMREVEEEN-RALRRQLS 84
W+ +GS ED S +PLE + + E L++R+R + + L QLS
Sbjct: 149 WVARGTGSGEDSSTSSSTPLEDEEPQEPNRLETGEAGEELDLRLRLAQPSSPEVLTPQLS 208
Query: 85 LAQGRAPSHRRGNHSKTYSMEEGTGDSENL 114
G + + G S + S + +G E L
Sbjct: 209 PGSG---TPQAGTPSPSRSRDSNSGPEEPL 235
>gi|46255005 reticulon 2 isoform B [Homo sapiens]
Length = 472
Score = 30.4 bits (67), Expect = 6.3
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 26 WIYLFSGSFEDGKPVSLSPLESQAHSPRYTASSQRERESLEVRMREVEEEN-RALRRQLS 84
W+ +GS ED S +PLE + + E L++R+R + + L QLS
Sbjct: 149 WVARGTGSGEDSSTSSSTPLEDEEPQEPNRLETGEAGEELDLRLRLAQPSSPEVLTPQLS 208
Query: 85 LAQGRAPSHRRGNHSKTYSMEEGTGDSENL 114
G + + G S + S + +G E L
Sbjct: 209 PGSG---TPQAGTPSPSRSRDSNSGPEEPL 235
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,424,588
Number of Sequences: 37866
Number of extensions: 1190636
Number of successful extensions: 3627
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3585
Number of HSP's gapped (non-prelim): 50
length of query: 756
length of database: 18,247,518
effective HSP length: 110
effective length of query: 646
effective length of database: 14,082,258
effective search space: 9097138668
effective search space used: 9097138668
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.