Guide to the Human Genome
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Name: HAUS1 Sequence: fasta or formatted (278aa) NCBI GI: 19923971
Description:

coiled-coil domain containing 5

Referenced in:

Coiled-Coil Proteins
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         23           2
 C cysteine            0.4          1           1
 D aspartate           5.8         16           1
 E glutamate          12.2         34           2
 F phenylalanine       2.5          7           1
 G glycine             1.4          4           1
 H histidine           1.8          5           2
 I isoleucine          4.0         11           1
 K lysine              9.0         25           3
 L leucine            13.7         38           2
 M methionine          2.5          7           2
 N asparagine          3.6         10           1
 P proline             3.2          9           1
 Q glutamine           4.3         12           2
 R arginine            6.1         17           2
 S serine              8.6         24           2
 T threonine           4.7         13           2
 V valine              5.4         15           1
 W tryptophan          0.4          1           1
 Y tyrosine            2.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 5 
MYH7                  0.043   myosin, heavy chain 7, cardiac muscle, beta 
MYH13                 0.039   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GOLGA4                0.039   golgi autoantigen, golgin subfamily a, 4 
MYH4                  0.037   myosin, heavy polypeptide 4, skeletal muscle 
C6orf97               0.036   hypothetical protein LOC80129 
KTN1                  0.036   kinectin 1 isoform a 
KTN1                  0.036   kinectin 1 isoform c 
KTN1                  0.036   kinectin 1 isoform a 
MYH14                 0.036   myosin, heavy chain 14 isoform 1 
MYH14                 0.036   myosin, heavy chain 14 isoform 2 
MYH14                 0.036   myosin, heavy chain 14 isoform 3 
MYH15                 0.036   myosin, heavy polypeptide 15 
MYH3                  0.034   myosin, heavy chain 3, skeletal muscle, embryonic [H...
HMMR                  0.034   hyaluronan-mediated motility receptor isoform a [Ho...
DST                   0.034   dystonin isoform 1e precursor 
HOOK3                 0.034   golgi-associated microtubule-binding protein HOOK3 [...
FILIP1                0.034   filamin A interacting protein 1 
FILIP1L               0.034   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.034   filamin A interacting protein 1-like isoform 2 [Hom...
FILIP1L               0.034   filamin A interacting protein 1-like isoform 1 [Hom...
KIF20B                0.034   M-phase phosphoprotein 1 
MYH2                  0.032   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.032   myosin, heavy chain 2, skeletal muscle, adult [Homo...
HMMR                  0.032   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.032   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.032   hyaluronan-mediated motility receptor isoform b [Ho...
CENPE                 0.032   centromere protein E 
HIP1                  0.032   huntingtin interacting protein 1 
CLUAP1                0.032   clusterin associated protein 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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