Guide to the Human Genome
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Name: IL17D Sequence: fasta or formatted (202aa) NCBI GI: 19923715
Description:

interleukin 17D precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.9         26           2
 C cysteine            4.0          8           1
 D aspartate           4.0          8           1
 E glutamate           5.0         10           2
 F phenylalanine       2.5          5           1
 G glycine             8.9         18           2
 H histidine           1.0          2           2
 I isoleucine          2.0          4           1
 K lysine              1.5          3           1
 L leucine             9.9         20           3
 M methionine          1.0          2           1
 N asparagine          2.0          4           1
 P proline            11.9         24           2
 Q glutamine           2.0          4           1
 R arginine           11.4         23           2
 S serine              5.4         11           2
 T threonine           4.0          8           1
 V valine              5.4         11           2
 W tryptophan          1.0          2           1
 Y tyrosine            4.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 17D precursor 
IL17C                 0.125   interleukin 17C 
IL17B                 0.115   interleukin 17B precursor 
IL17F                 0.093   interleukin 17F precursor 
IL17A                 0.070   interleukin 17A precursor 
IL25                  0.055   interleukin 25 isoform 2 
IL25                  0.055   interleukin 25 isoform 1 precursor 
LOC100290893          0.013   PREDICTED: hypothetical protein XP_002347938 
LOC100288361          0.013   PREDICTED: hypothetical protein XP_002344205 
FBRSL1                0.013   fibrosin-like 1 
CDC42EP5              0.013   CDC42 effector protein 5 
LOC100130387          0.010   PREDICTED: similar to hCG2042422 
LOC100130387          0.010   PREDICTED: hypothetical protein 
LOC100130387          0.010   PREDICTED: similar to hCG2042422 
LOC730275             0.010   PREDICTED: hypothetical protein 
LOC730275             0.010   PREDICTED: hypothetical protein 
ADPGK                 0.010   ADP-dependent glucokinase 
FIBCD1                0.008   fibrinogen C domain containing 1 
FIBCD1                0.008   fibrinogen C domain containing 1 
LOC100130503          0.008   PREDICTED: hypothetical protein 
LOC728351             0.008   PREDICTED: hypothetical protein 
LOC100130503          0.008   PREDICTED: hypothetical protein 
LOC728351             0.008   PREDICTED: hypothetical protein 
RNF135                0.008   ring finger protein 135 isoform 2 
RNF135                0.008   ring finger protein 135 isoform 1 
MLL2                  0.008   myeloid/lymphoid or mixed-lineage leukemia 2 
SLC35E4               0.008   solute carrier family 35, member E4 
LOC645321             0.008   PREDICTED: hypothetical protein 
ATN1                  0.008   atrophin-1 
ATN1                  0.008   atrophin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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