Guide to the Human Genome
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Name: IL17F Sequence: fasta or formatted (163aa) NCBI GI: 16418375
Description:

interleukin 17F precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          7           3
 C cysteine            3.7          6           1
 D aspartate           1.8          3           1
 E glutamate           4.9          8           1
 F phenylalanine       2.5          4           2
 G glycine             6.1         10           2
 H histidine           3.1          5           2
 I isoleucine          6.1         10           2
 K lysine              5.5          9           1
 L leucine             7.4         12           3
 M methionine          3.1          5           1
 N asparagine          4.9          8           1
 P proline             6.7         11           2
 Q glutamine           6.1         10           2
 R arginine            4.9          8           2
 S serine              8.6         14           1
 T threonine           6.1         10           1
 V valine             11.0         18           2
 W tryptophan          1.2          2           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 17F precursor 
IL17A                 0.326   interleukin 17A precursor 
IL17C                 0.135   interleukin 17C 
IL17D                 0.119   interleukin 17D precursor 
IL17B                 0.103   interleukin 17B precursor 
IL25                  0.061   interleukin 25 isoform 2 
IL25                  0.061   interleukin 25 isoform 1 precursor 
TRIM66                0.019   tripartite motif-containing 66 
MUM1L1                0.013   melanoma associated antigen (mutated) 1-like 1 [Homo...
NASP                  0.013   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.013   nuclear autoantigenic sperm protein isoform 1 
DCC                   0.010   deleted in colorectal carcinoma 
LOC100293005          0.010   PREDICTED: hypothetical protein 
LOC100289780          0.010   PREDICTED: hypothetical protein XP_002347375 
LOC100289202          0.010   PREDICTED: hypothetical protein XP_002343213 
HSD17B11              0.006   estradiol 17-beta-dehydrogenase 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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