Guide to the Human Genome
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Name: IL17A Sequence: fasta or formatted (155aa) NCBI GI: 4504651
Description:

interleukin 17A precursor

Referenced in:

Interleukins and Their Receptors
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          5           1
 C cysteine            3.9          6           1
 D aspartate           3.2          5           1
 E glutamate           5.2          8           1
 F phenylalanine       1.3          2           1
 G glycine             3.9          6           1
 H histidine           4.5          7           2
 I isoleucine          6.5         10           1
 K lysine              3.9          6           1
 L leucine             9.0         14           5
 M methionine          1.9          3           1
 N asparagine         10.3         16           1
 P proline             9.0         14           2
 Q glutamine           1.3          2           2
 R arginine            7.1         11           2
 S serine              7.7         12           2
 T threonine           5.8          9           1
 V valine              8.4         13           1
 W tryptophan          1.3          2           1
 Y tyrosine            2.6          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 17A precursor 
IL17F                 0.332   interleukin 17F precursor 
IL17C                 0.122   interleukin 17C 
IL17B                 0.099   interleukin 17B precursor 
IL17D                 0.092   interleukin 17D precursor 
IL25                  0.046   interleukin 25 isoform 1 precursor 
IL25                  0.043   interleukin 25 isoform 2 
SI                    0.016   sucrase-isomaltase 
CCDC18                0.016   sarcoma antigen NY-SAR-41 
CASP8AP2              0.010   caspase 8 associated protein 2 
CASP8AP2              0.010   caspase 8 associated protein 2 
CASP8AP2              0.010   caspase 8 associated protein 2 
WAC                   0.010   WW domain-containing adapter with a coiled-coil regi...
WAC                   0.010   WW domain-containing adapter with a coiled-coil regi...
L1CAM                 0.010   L1 cell adhesion molecule isoform 3 precursor [Homo...
L1CAM                 0.010   L1 cell adhesion molecule isoform 2 precursor 
L1CAM                 0.010   L1 cell adhesion molecule isoform 1 precursor 
ZCCHC6                0.007   zinc finger, CCHC domain containing 6 
C5orf42               0.007   hypothetical protein LOC65250 
RIPK1                 0.007   receptor (TNFRSF)-interacting serine-threonine kinas...
NCOA6                 0.007   nuclear receptor coactivator 6 
RBM27                 0.007   RNA binding motif protein 27 
BTN2A2                0.007   butyrophilin, subfamily 2, member A2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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