Search of human proteins with 19923362

Search of human proteins with 19923362

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19923362 Thy-1 cell surface antigen preproprotein [Homo
sapiens]
         (161 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19923362 Thy-1 cell surface antigen preproprotein [Homo sapiens]   317   2e-87
gi|98986445 carcinoembryonic antigen-related cell adhesion molec...    32   0.24 
gi|10835203 advanced glycosylation end product-specific receptor...    30   0.69 
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]            30   0.90 
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]            30   0.90 
gi|47524175 fibroblast growth factor receptor 4 isoform 1 precur...    30   1.2  
gi|47524173 fibroblast growth factor receptor 4 isoform 1 precur...    30   1.2  
gi|47524177 fibroblast growth factor receptor 4 isoform 2 precur...    29   1.5  
gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]          29   1.5  
gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]           29   1.5  
gi|134947986 zinc finger protein 44 [Homo sapiens]                     29   1.5  
gi|4885123 CD80 antigen precursor [Homo sapiens]                       29   2.0  
gi|171846278 leucine-rich repeat kinase 2 [Homo sapiens]               28   3.4  
gi|21314600 carcinoembryonic antigen-related cell adhesion molec...    28   3.4  
gi|194473700 Src homology 3 domain-containing guanine nucleotide...    28   3.4  
gi|4757826 beta-2-microglobulin precursor [Homo sapiens]               28   4.5  
gi|117168283 N-acetyltransferase 8B [Homo sapiens]                     28   4.5  
gi|5729734 activator of S phase kinase [Homo sapiens]                  28   4.5  
gi|194473720 upstream of NRAS isoform 3 [Homo sapiens]                 28   4.5  
gi|56117850 upstream of NRAS isoform 2 [Homo sapiens]                  28   4.5  
gi|8393638 F11 receptor precursor [Homo sapiens]                       27   5.8  
gi|91208433 CD86 antigen isoform 2 precursor [Homo sapiens]            27   5.8  
gi|91208430 CD86 antigen isoform 1 [Homo sapiens]                      27   5.8  
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact...    27   7.6  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    27   7.6  
gi|5453613 CD7 antigen precursor [Homo sapiens]                        27   7.6  
gi|60460897 butyrophilin-like 9 [Homo sapiens]                         27   7.6  
gi|148728162 protein tyrosine phosphatase, receptor type, J isof...    27   9.9  
gi|14150145 matrix-remodelling associated 8 [Homo sapiens]             27   9.9  

>gi|19923362 Thy-1 cell surface antigen preproprotein [Homo sapiens]
          Length = 161

 Score =  317 bits (813), Expect = 2e-87
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MNLAISIALLLTVLQVSRGQKVTSLTACLVDQSLRLDCRHENTSSSPIQYEFSLTRETKK 60
           MNLAISIALLLTVLQVSRGQKVTSLTACLVDQSLRLDCRHENTSSSPIQYEFSLTRETKK
Sbjct: 1   MNLAISIALLLTVLQVSRGQKVTSLTACLVDQSLRLDCRHENTSSSPIQYEFSLTRETKK 60

Query: 61  HVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNV 120
           HVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNV
Sbjct: 61  HVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNV 120

Query: 121 TVLRDKLVKCEGISLLAQNTSWLLLLLLSLSLLQATDFMSL 161
           TVLRDKLVKCEGISLLAQNTSWLLLLLLSLSLLQATDFMSL
Sbjct: 121 TVLRDKLVKCEGISLLAQNTSWLLLLLLSLSLLQATDFMSL 161


>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
           5 preproprotein [Homo sapiens]
          Length = 702

 Score = 32.0 bits (71), Expect = 0.24
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 17/72 (23%)

Query: 89  LYLSAFTSKDEGTYTCALHH--SGHS---------------PPISSQNVTVLRDKLVKCE 131
           L++S  T K+ G YTC  ++  SGHS               P ISS N   + DK     
Sbjct: 462 LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAF 521

Query: 132 GISLLAQNTSWL 143
                AQNT++L
Sbjct: 522 TCEPEAQNTTYL 533



 Score = 27.7 bits (60), Expect = 4.5
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 70  PEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTVLRDKLVK 129
           P   Y  R N   + + +VL+++  T  + GTY C +     S   + +N ++++   V 
Sbjct: 621 PSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFV-----SNLATGRNNSIVKSITVS 675

Query: 130 CEGIS 134
             G S
Sbjct: 676 ASGTS 680



 Score = 26.6 bits (57), Expect = 9.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 70  PEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHS 109
           P   Y    N T + + + L++   T  + G+YTC  H+S
Sbjct: 265 PPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNS 304


>gi|10835203 advanced glycosylation end product-specific receptor
           isoform 1 precursor [Homo sapiens]
          Length = 404

 Score = 30.4 bits (67), Expect = 0.69
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 88  VLYLSAFTSKDEGTYTCALHHSGHSP 113
           VL L     +D+GTY+C   HS H P
Sbjct: 285 VLILPEIGPQDQGTYSCVATHSSHGP 310


>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 30.0 bits (66), Expect = 0.90
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 23  TSLTACLVDQSLR---LDCRHENTSSSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTN 79
           TS T+C    S       C+   TSS+   Y+ S T  T      GT     +   SRT+
Sbjct: 128 TSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTS 187

Query: 80  FTSKYNMKVLYLSAFTSKDEGT-YTCALHHSGHS 112
            T          ++++ +  GT  TC+   SG S
Sbjct: 188 STCSCQSSGTSSTSYSCQSSGTSSTCSCQSSGTS 221


>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 30.0 bits (66), Expect = 0.90
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 23  TSLTACLVDQSLR---LDCRHENTSSSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTN 79
           TS T+C    S       C+   TSS+   Y+ S T  T      GT     +   SRT+
Sbjct: 128 TSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTS 187

Query: 80  FTSKYNMKVLYLSAFTSKDEGT-YTCALHHSGHS 112
            T          ++++ +  GT  TC+   SG S
Sbjct: 188 STCSCQSSGTSSTSYSCQSSGTSSTCSCQSSGTS 221


>gi|47524175 fibroblast growth factor receptor 4 isoform 1 precursor
           [Homo sapiens]
          Length = 802

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 26  TACLVDQSLRLDCRHENTSSSPIQYEFSLTRETKKHVL-----FGTVGVPEHTYRSRTNF 80
           T  +V   + L C+  + +   IQ+         KH++     FG  G P +    +T  
Sbjct: 259 TTAVVGSDVELLCKVYSDAQPHIQW--------LKHIVINGSSFGADGFP-YVQVLKTAD 309

Query: 81  TSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQN--VTVLRDK 126
            +   ++VLYL   +++D G YTC    +G+S  +S Q+  +TVL ++
Sbjct: 310 INSSEVEVLYLRNVSAEDAGEYTCL---AGNSIGLSYQSAWLTVLPEE 354


>gi|47524173 fibroblast growth factor receptor 4 isoform 1 precursor
           [Homo sapiens]
          Length = 802

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 26  TACLVDQSLRLDCRHENTSSSPIQYEFSLTRETKKHVL-----FGTVGVPEHTYRSRTNF 80
           T  +V   + L C+  + +   IQ+         KH++     FG  G P +    +T  
Sbjct: 259 TTAVVGSDVELLCKVYSDAQPHIQW--------LKHIVINGSSFGADGFP-YVQVLKTAD 309

Query: 81  TSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQN--VTVLRDK 126
            +   ++VLYL   +++D G YTC    +G+S  +S Q+  +TVL ++
Sbjct: 310 INSSEVEVLYLRNVSAEDAGEYTCL---AGNSIGLSYQSAWLTVLPEE 354


>gi|47524177 fibroblast growth factor receptor 4 isoform 2 precursor
           [Homo sapiens]
          Length = 762

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 19/105 (18%)

Query: 26  TACLVDQSLRLDCRHENTSSSPIQYEFSLTRETKKHVL-----FGTVGVPEHTYRSRTNF 80
           T  +V   + L C+  + +   IQ+         KH++     FG  G P +    +T  
Sbjct: 259 TTAVVGSDVELLCKVYSDAQPHIQW--------LKHIVINGSSFGADGFP-YVQVLKTAD 309

Query: 81  TSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQN--VTVL 123
            +   ++VLYL   +++D G YTC    +G+S  +S Q+  +TVL
Sbjct: 310 INSSEVEVLYLRNVSAEDAGEYTCL---AGNSIGLSYQSAWLTVL 351


>gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]
          Length = 956

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 85  NMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTV 122
           N   L + A TS D GTY+C  +++  +P   S N+ V
Sbjct: 291 NGGTLTIPAITSDDAGTYSCIANNNVGNPAKKSTNIIV 328


>gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]
          Length = 727

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 85  NMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTV 122
           N   L + A TS D GTY+C  +++  +P   S N+ V
Sbjct: 62  NGGTLTIPAITSDDAGTYSCIANNNVGNPAKKSTNIIV 99


>gi|134947986 zinc finger protein 44 [Homo sapiens]
          Length = 615

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 33  SLRLDCRHENTSSSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLS 92
           S +  CRHE T S    YE  +    K    F  +   E T+ +   +  K   K  +  
Sbjct: 487 SFKYFCRHERTHSEEKSYECQIC--GKAFSRFSYLKTHERTHTAEKPYECKQCRKAFFWP 544

Query: 93  AFTSKDEGTYT 103
           +F  + E T+T
Sbjct: 545 SFLLRHERTHT 555


>gi|4885123 CD80 antigen precursor [Homo sapiens]
          Length = 288

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 8/81 (9%)

Query: 30  VDQSLRLDCRHENTSSSPIQYEFSLTRETKKHVLF---GTVGV-PEHTYRSRTNFTSKYN 85
           V +   L C H N S   +       ++ KK VL    G + + PE  Y++RT F    N
Sbjct: 42  VKEVATLSCGH-NVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPE--YKNRTIFDITNN 98

Query: 86  MKVLYLSAFTSKDEGTYTCAL 106
           + ++ L A    DEGTY C +
Sbjct: 99  LSIVIL-ALRPSDEGTYECVV 118


>gi|171846278 leucine-rich repeat kinase 2 [Homo sapiens]
          Length = 2527

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 61  HVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTS-KDEGTYTCALHHSGHSPPISSQN 119
           HVLF  V   +      T F    +  +L LSA T+ KDE      + H  HS  I   N
Sbjct: 185 HVLFERVSEEQ-----LTEFVENKDYMIL-LSALTNFKDEEEIVLHVLHCLHSLAIPCNN 238

Query: 120 VTVLRDKLVKCEGI 133
           V VL    V+C  I
Sbjct: 239 VEVLMSGNVRCYNI 252


>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
           8 [Homo sapiens]
          Length = 349

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 18/80 (22%), Positives = 37/80 (46%)

Query: 70  PEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTVLRDKLVK 129
           P   Y    N T +   + L++   T+K+ G+Y C   +S      ++  +  + D LV+
Sbjct: 265 PPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACHTTNSATGRNRTTVRMITVSDALVQ 324

Query: 130 CEGISLLAQNTSWLLLLLLS 149
                L A+ T  +++ +L+
Sbjct: 325 GSSPGLSARATVSIMIGVLA 344


>gi|194473700 Src homology 3 domain-containing guanine nucleotide
           exchange factor [Homo sapiens]
          Length = 871

 Score = 28.1 bits (61), Expect = 3.4
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 10/94 (10%)

Query: 29  LVDQSLRLDCRHENTSSSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTNFTSKYNMKV 88
           L DQ L   C +E  +SSP         +    +L+       H + + T  ++  N KV
Sbjct: 708 LRDQLLVESCDNEELNSSP--------GKNSSTMLYSRQSSASHLF-TLTVLSNHANEKV 758

Query: 89  -LYLSAFTSKDEGTYTCALHHSGHSPPISSQNVT 121
            + L A T  +   +  AL HS   PP    ++T
Sbjct: 759 EMLLGAETQSERARWITALGHSSGKPPADRTSLT 792


>gi|4757826 beta-2-microglobulin precursor [Homo sapiens]
          Length = 119

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 71  EHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPP 114
           E    S  +F+  ++  +LY + FT  ++  Y C ++H   S P
Sbjct: 67  EKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQP 110


>gi|117168283 N-acetyltransferase 8B [Homo sapiens]
          Length = 227

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 111 HSPPISSQNVTVLRDKLVKCEG-ISLLAQNTSWLLLLLLSLSLLQATDFMS 160
           H+P    + + + R  ++   G ++LL  + SW+L L+ SLSLL A  F++
Sbjct: 28  HAPATFRRLLKLPRTLILLLGGALALLLVSGSWILALVFSLSLLPALWFLA 78


>gi|5729734 activator of S phase kinase [Homo sapiens]
          Length = 674

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 13/104 (12%)

Query: 37  DCRHENTSSSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTS 96
           DC+ ++T+     + +  T+ET+K +LF +  +P H          K + K   LS    
Sbjct: 384 DCQEDDTTVKEQNFLYKETQETEKKLLFISEPIP-HPSNELRGLNEKMSNKCSMLSTAED 442

Query: 97  KDEGTYT----------CALHHSGHSPPISSQNVTVLRDKLVKC 130
                +T          C L  S H+  +S  ++  LR    KC
Sbjct: 443 DIRQNFTQLPLHKNKQECILDISEHT--LSENDLEELRVDHYKC 484


>gi|194473720 upstream of NRAS isoform 3 [Homo sapiens]
          Length = 813

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 48  IQYEFSLTRETKKHVLFGTVGVPEHTY-RSRTNFTSKYNMKVLYLSAFTSKDEGTYTC-- 104
           +++E S  R T K +    V + +      R N       +V YL+      EG      
Sbjct: 115 VEFEVSSDRRTGKPIAVKLVKIKQEILPEERMN-----GQEVFYLTYTPEDVEGNVQLET 169

Query: 105 ------ALHHSGHSPPISSQNVTVLRDKLVKCEGI 133
                  + ++ H+  +S++N+ +L+ K  +C+G+
Sbjct: 170 GDKINFVIDNNKHTGAVSARNIMLLKKKQARCQGV 204


>gi|56117850 upstream of NRAS isoform 2 [Homo sapiens]
          Length = 767

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 48  IQYEFSLTRETKKHVLFGTVGVPEHTY-RSRTNFTSKYNMKVLYLSAFTSKDEGTYTC-- 104
           +++E S  R T K +    V + +      R N       +V YL+      EG      
Sbjct: 69  VEFEVSSDRRTGKPIAVKLVKIKQEILPEERMN-----GQEVFYLTYTPEDVEGNVQLET 123

Query: 105 ------ALHHSGHSPPISSQNVTVLRDKLVKCEGI 133
                  + ++ H+  +S++N+ +L+ K  +C+G+
Sbjct: 124 GDKINFVIDNNKHTGAVSARNIMLLKKKQARCQGV 158


>gi|8393638 F11 receptor precursor [Homo sapiens]
          Length = 299

 Score = 27.3 bits (59), Expect = 5.8
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 19/83 (22%)

Query: 34  LRLDCRHENTSSSPIQYEFSLTRETKKHVLFGTVGVPEHTYRSRTNFTSKYNMKVLYL-- 91
           ++L C +   SS  ++++F    +T + V +                T+ Y  +V +L  
Sbjct: 46  VKLSCAYSGFSSPRVEWKFD-QGDTTRLVCYNN------------KITASYEDRVTFLPT 92

Query: 92  ----SAFTSKDEGTYTCALHHSG 110
                + T +D GTYTC +   G
Sbjct: 93  GITFKSVTREDTGTYTCMVSEEG 115


>gi|91208433 CD86 antigen isoform 2 precursor [Homo sapiens]
          Length = 323

 Score = 27.3 bits (59), Expect = 5.8
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 74  YRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHH 108
           Y  RT+F S  +   L L     KD+G Y C +HH
Sbjct: 76  YMGRTSFDS--DSWTLRLHNLQIKDKGLYQCIIHH 108


>gi|91208430 CD86 antigen isoform 1 [Homo sapiens]
          Length = 329

 Score = 27.3 bits (59), Expect = 5.8
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 74  YRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHH 108
           Y  RT+F S  +   L L     KD+G Y C +HH
Sbjct: 82  YMGRTSFDS--DSWTLRLHNLQIKDKGLYQCIIHH 114


>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform a [Homo sapiens]
          Length = 6620

 Score = 26.9 bits (58), Expect = 7.6
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 77   RTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTV 122
            R    S+   ++L +  FT++D+G Y C L      P  ++  V +
Sbjct: 4668 RFEVVSQGRQQMLVIKGFTAEDQGEYHCGLAQGSICPAAATFQVAL 4713


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 26.9 bits (58), Expect = 7.6
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 77   RTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTV 122
            R    S+   ++L +  FT++D+G Y C L      P  ++  V +
Sbjct: 4668 RFEVVSQGRQQMLVIKGFTAEDQGEYHCGLAQGSICPAAATFQVAL 4713


>gi|5453613 CD7 antigen precursor [Homo sapiens]
          Length = 240

 Score = 26.9 bits (58), Expect = 7.6
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 65  GTVGVPEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTC 104
           G V   +  +R R +F+   +   + +      D GTYTC
Sbjct: 75  GVVPTTDRRFRGRIDFSGSQDNLTITMHRLQLSDTGTYTC 114


>gi|60460897 butyrophilin-like 9 [Homo sapiens]
          Length = 535

 Score = 26.9 bits (58), Expect = 7.6
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 74  YRSRTNFTSK---YNMKVLYLSAFTSKDEGTYTCALHHSGHS 112
           +R+RT        Y   VL L +    D+GTY C  H    S
Sbjct: 100 FRNRTKLVKDDIAYGSVVLQLHSIIPSDKGTYGCRFHSDNFS 141


>gi|148728162 protein tyrosine phosphatase, receptor type, J isoform
           1 precursor [Homo sapiens]
          Length = 1337

 Score = 26.6 bits (57), Expect = 9.9
 Identities = 16/62 (25%), Positives = 25/62 (40%)

Query: 68  GVPEHTYRSRTNFTSKYNMKVLYLSAFTSKDEGTYTCALHHSGHSPPISSQNVTVLRDKL 127
           G    T  +  NF++ YN+ +  +S          TC    +   PP  S N+T +    
Sbjct: 773 GTEYRTEVTYLNFSTSYNISITTVSCGKMAAPTRNTCTTGITDPPPPDGSPNITSVSHNS 832

Query: 128 VK 129
           VK
Sbjct: 833 VK 834


>gi|14150145 matrix-remodelling associated 8 [Homo sapiens]
          Length = 442

 Score = 26.6 bits (57), Expect = 9.9
 Identities = 9/11 (81%), Positives = 10/11 (90%)

Query: 98  DEGTYTCALHH 108
           DEGTY+C LHH
Sbjct: 266 DEGTYSCHLHH 276


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.130    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,256,956
Number of Sequences: 37866
Number of extensions: 194360
Number of successful extensions: 870
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 837
Number of HSP's gapped (non-prelim): 51
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.