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Search of human proteins with 19923229
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923229 protein phosphatase 2, regulatory subunit B'',
alpha isoform 1 [Homo sapiens]
(1150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha... 2316 0.0
gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha... 1004 0.0
gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ... 601 e-171
gi|41349491 protein phosphatase 2, regulatory subunit B'', beta ... 191 4e-48
gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa... 151 4e-36
gi|31542242 serine/threonine-protein phosphatase 2A regulatory s... 123 9e-28
gi|195947369 junction-mediating and regulatory protein [Homo sap... 44 9e-04
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 42 0.003
gi|71061468 centromere protein E [Homo sapiens] 42 0.004
gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens] 40 0.013
gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens] 40 0.013
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 40 0.017
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 39 0.037
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 38 0.048
gi|44955929 calmodulin regulated spectrin-associated protein 1-l... 38 0.063
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 37 0.083
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 37 0.083
gi|206597470 neural precursor cell expressed, developmentally do... 37 0.14
gi|206597468 neural precursor cell expressed, developmentally do... 37 0.14
gi|23097254 neural precursor cell expressed, developmentally dow... 37 0.14
gi|206597465 neural precursor cell expressed, developmentally do... 37 0.14
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 37 0.14
gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 ... 36 0.18
gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 K... 36 0.18
gi|58331242 formin homology 2 domain containing 3 [Homo sapiens] 35 0.41
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.41
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.41
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 35 0.41
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 35 0.41
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 35 0.41
>gi|19923229 protein phosphatase 2, regulatory subunit B'', alpha
isoform 1 [Homo sapiens]
Length = 1150
Score = 2316 bits (6003), Expect = 0.0
Identities = 1150/1150 (100%), Positives = 1150/1150 (100%)
Query: 1 MAATYRLVVSTVNHYSSVVIDRRFEQAIHYCTGTCHTFTHGIDCIVVHHSVCADLLHIPV 60
MAATYRLVVSTVNHYSSVVIDRRFEQAIHYCTGTCHTFTHGIDCIVVHHSVCADLLHIPV
Sbjct: 1 MAATYRLVVSTVNHYSSVVIDRRFEQAIHYCTGTCHTFTHGIDCIVVHHSVCADLLHIPV 60
Query: 61 SQFKDADLNSMFLPHENGLSSAEGDYPQQAFTGIPRVKRGSTFQNTYNLKDIAGEAISFA 120
SQFKDADLNSMFLPHENGLSSAEGDYPQQAFTGIPRVKRGSTFQNTYNLKDIAGEAISFA
Sbjct: 61 SQFKDADLNSMFLPHENGLSSAEGDYPQQAFTGIPRVKRGSTFQNTYNLKDIAGEAISFA 120
Query: 121 SGKIKEFSFEKLKNSNHAAYRKGRKVKSDSFNRRSVDLDLLCGHYNNDGNAPSFGLLRSS 180
SGKIKEFSFEKLKNSNHAAYRKGRKVKSDSFNRRSVDLDLLCGHYNNDGNAPSFGLLRSS
Sbjct: 121 SGKIKEFSFEKLKNSNHAAYRKGRKVKSDSFNRRSVDLDLLCGHYNNDGNAPSFGLLRSS 180
Query: 181 SVEEKPLSHRNSLDTNLTSMFLQNFSEEDLVTQILEKHKIDNFSSGTDIKMCLDILLKCS 240
SVEEKPLSHRNSLDTNLTSMFLQNFSEEDLVTQILEKHKIDNFSSGTDIKMCLDILLKCS
Sbjct: 181 SVEEKPLSHRNSLDTNLTSMFLQNFSEEDLVTQILEKHKIDNFSSGTDIKMCLDILLKCS 240
Query: 241 EDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSETVYMNVMTRLASYLKKLPFEFMQSG 300
EDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSETVYMNVMTRLASYLKKLPFEFMQSG
Sbjct: 241 EDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSETVYMNVMTRLASYLKKLPFEFMQSG 300
Query: 301 NNEALDLTELISNMPSLQLTPFSPVFGTEQPPKYEDVVQLSASDSGRFQTIELQNDKPNS 360
NNEALDLTELISNMPSLQLTPFSPVFGTEQPPKYEDVVQLSASDSGRFQTIELQNDKPNS
Sbjct: 301 NNEALDLTELISNMPSLQLTPFSPVFGTEQPPKYEDVVQLSASDSGRFQTIELQNDKPNS 360
Query: 361 RKMDTVQSIPNNSTNSLYNLEVNDPRTLKAVQVQSQSLTMNPLENVSSDDLMETLYIEEE 420
RKMDTVQSIPNNSTNSLYNLEVNDPRTLKAVQVQSQSLTMNPLENVSSDDLMETLYIEEE
Sbjct: 361 RKMDTVQSIPNNSTNSLYNLEVNDPRTLKAVQVQSQSLTMNPLENVSSDDLMETLYIEEE 420
Query: 421 SDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNL 480
SDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNL
Sbjct: 421 SDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNL 480
Query: 481 PKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNSNFL 540
PKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNSNFL
Sbjct: 481 PKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNSNFL 540
Query: 541 NSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIED 600
NSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIED
Sbjct: 541 NSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIED 600
Query: 601 FAQELVECKSSRGSLSQEKEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQT 660
FAQELVECKSSRGSLSQEKEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQT
Sbjct: 601 FAQELVECKSSRGSLSQEKEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQT 660
Query: 661 PEVIKIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPD 720
PEVIKIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPD
Sbjct: 661 PEVIKIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPD 720
Query: 721 TCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTA 780
TCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTA
Sbjct: 721 TCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTA 780
Query: 781 QSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPE 840
QSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPE
Sbjct: 781 QSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPE 840
Query: 841 FHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHF 900
FHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHF
Sbjct: 841 FHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHF 900
Query: 901 YVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYAD 960
YVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYAD
Sbjct: 901 YVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYAD 960
Query: 961 FVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHD 1020
FVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHD
Sbjct: 961 FVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHD 1020
Query: 1021 LLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDG 1080
LLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDG
Sbjct: 1021 LLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDG 1080
Query: 1081 PEPSDWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEK 1140
PEPSDWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEK
Sbjct: 1081 PEPSDWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEK 1140
Query: 1141 CGKLQSVDEE 1150
CGKLQSVDEE
Sbjct: 1141 CGKLQSVDEE 1150
>gi|32967586 protein phosphatase 2, regulatory subunit B'', alpha
isoform 2 [Homo sapiens]
Length = 529
Score = 1004 bits (2597), Expect = 0.0
Identities = 485/486 (99%), Positives = 486/486 (100%)
Query: 665 KIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSN 724
+IQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSN
Sbjct: 44 QIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSN 103
Query: 725 HEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFI 784
HEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFI
Sbjct: 104 HEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFI 163
Query: 785 AMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSR 844
AMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSR
Sbjct: 164 AMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSR 223
Query: 845 YITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIY 904
YITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIY
Sbjct: 224 YITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDYFSYEHFYVIY 283
Query: 905 CKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWF 964
CKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWF
Sbjct: 284 CKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWF 343
Query: 965 LISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQ 1024
LISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQ
Sbjct: 344 LISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQ 403
Query: 1025 MLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPS 1084
MLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPS
Sbjct: 404 MLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPS 463
Query: 1085 DWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKL 1144
DWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKL
Sbjct: 464 DWDRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKL 523
Query: 1145 QSVDEE 1150
QSVDEE
Sbjct: 524 QSVDEE 529
>gi|33695078 protein phosphatase 2, regulatory subunit B'', beta
isoform 1 [Homo sapiens]
Length = 575
Score = 601 bits (1550), Expect = e-171
Identities = 285/458 (62%), Positives = 356/458 (77%), Gaps = 22/458 (4%)
Query: 674 PGTPLPPPAT---SPSSPRPLSPVPHVNNVVNA------------PL----SINIPRFYF 714
PGTP P PA + SSPR PHV + PL S +IP FYF
Sbjct: 74 PGTPGPGPALPLGAASSPRN---APHVRGTRRSAGTRVVQTRKEEPLPPATSQSIPTFYF 130
Query: 715 PEGLPDTCSNHEQTLSRIETAFMDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEK 774
P G P N + +S+IE+ F ++A + +MG +AK CGCPLYWK P+F AGGE+
Sbjct: 131 PRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGER 190
Query: 775 TGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLEQEDFIPLLQDVVDTHPGLTF 834
TG V+ F+AMWRK+L N HDDA+KF+ LL P C+ L QEDF+P LQDVV+THPGL+F
Sbjct: 191 TGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSF 250
Query: 835 LKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFLQTLALLEEEEDINQITDY 894
LK+A EFHSRYITTVIQRIFY VNRSWSG+IT E+R+S+FLQ +ALLEEE DINQ+T++
Sbjct: 251 LKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEF 310
Query: 895 FSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTRGKTIQKEG 954
FSYEHFYVIYCKFWELDTDHDL I DL+R+ND A S+++I+RIFSGAVTRG+ +QKEG
Sbjct: 311 FSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEG 370
Query: 955 RMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIE 1014
++SYADFVWFLISEEDK+ PTSIEYWFRCMD+DGDG LSM+ELEYFYEEQC R+++M IE
Sbjct: 371 KISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIE 430
Query: 1015 PLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQK 1074
LPF D LCQMLDLVKP +GKITL+DLKRC++A++F+DTFFN+EKYLDHEQ++ ++ +
Sbjct: 431 ALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLR 490
Query: 1075 DVENDGPEPSDWDRFAAEEYETLVAEESAQAQFQEGFE 1112
D ++ GPE SDW+++AAEEY+ LVAEE+A +++GFE
Sbjct: 491 DGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFE 528
>gi|41349491 protein phosphatase 2, regulatory subunit B'', beta
isoform 2 [Homo sapiens]
Length = 176
Score = 191 bits (484), Expect = 4e-48
Identities = 83/129 (64%), Positives = 111/129 (86%)
Query: 984 MDVDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLK 1043
MD+DGDG LSM+ELEYFYEEQC R+++M IE LPF D LCQMLDLVKP +GKITL+DLK
Sbjct: 1 MDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLK 60
Query: 1044 RCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWDRFAAEEYETLVAEESA 1103
RC++A++F+DTFFN+EKYLDHEQ++ ++ +D ++ GPE SDW+++AAEEY+ LVAEE+A
Sbjct: 61 RCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETA 120
Query: 1104 QAQFQEGFE 1112
+++GFE
Sbjct: 121 GEPWEDGFE 129
>gi|239758164 PREDICTED: similar to protein phosphatase 2A 48 kDa
regulatory subunit [Homo sapiens]
Length = 290
Score = 151 bits (381), Expect = 4e-36
Identities = 67/106 (63%), Positives = 82/106 (77%)
Query: 744 ADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFIC 803
AD + + + CGCPLYWK P+F AGGE+TG V+ F+AMWRK+L N HDDA+KF+
Sbjct: 75 ADCPLLPSLPQACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVH 134
Query: 804 LLAKPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTV 849
LL P C+ L QEDF+P LQDVV+THPGL+FLK+A EFHSRYITTV
Sbjct: 135 LLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTV 180
>gi|31542242 serine/threonine-protein phosphatase 2A regulatory
subunit B'' gamma subunit [Homo sapiens]
Length = 453
Score = 123 bits (309), Expect = 9e-28
Identities = 75/277 (27%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 813 LEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRK 872
L + D + +++ T P L L+ + F+S Y+ T +++ F+ ++ +GKI +I
Sbjct: 188 LRESDLENYILELIPTLPQLDGLEKS--FYSFYVCTAVRKFFFFLDPLRTGKIKIQDILA 245
Query: 873 SNFLQTLALLEEEE--DINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQA 930
+FL L L +EE +Q T++FS +Y ++ LD DH+ +S+ +LSRY
Sbjct: 246 CSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTAT 305
Query: 931 SSSRIIERIFSGAVTRGKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDG 990
++ ++R+F +T +G M Y ++ F+++ E+++ P +++Y F+ +D++ G
Sbjct: 306 MTNVFLDRVFQECLTY------DGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKG 359
Query: 991 VLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHI 1050
L+++ L YF+ E M+ G +P+ F D+ ++ D+VKP KI+L+DL
Sbjct: 360 YLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDT 419
Query: 1051 FYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDWD 1087
+L + +E R+ V ND +D D
Sbjct: 420 VTTILIDLNGFWTYENREAL-----VANDSENSADLD 451
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 43.9 bits (102), Expect = 9e-04
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 585 EEDRALLLRILESIEDFAQELVECKSSRG-SLSQEKEMMQILQETLTTSSQANLSVCRSP 643
+ED L + +E+ +E+ E + RG S + E + + L++T T +A S+ S
Sbjct: 717 QEDHCDSLPSVLQVEEKTEEVGEGRVKRGPSQTTEPQSLVQLEDTSLTQLEAT-SLPLSG 775
Query: 644 VGDKAKDTTSAVLIQQTPEVIKIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNA 703
V + T S L+ E + P P P PPP P P P P+P +
Sbjct: 776 VTSELPPTISLPLLNNNLEPCSVTINPLPSPLPPTPPPPPPPPPPPPPPPLPVAKDSGPE 835
Query: 704 PLSINIPR 711
L ++PR
Sbjct: 836 TLEKDLPR 843
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 42.4 bits (98), Expect = 0.003
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 22/277 (7%)
Query: 404 ENVSSDDLMETLYIEEE-SDGKKALD-------KGQKTENGPSHELLKVNEHRAEFPEHA 455
E ++++ + +E+E S+ KK +D K +K ++ +++ + E A E
Sbjct: 933 EEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETI 992
Query: 456 THLKKCPTPMQNEIGKIFEKSFVNLPKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKLLMD 515
L K +Q + + K + +K E D S QE+ KL MD
Sbjct: 993 AKLSKEKKALQETHQQTLDDLQAEEDKVNILTKAKTKLEQQVDDLEGSLEQEK--KLRMD 1050
Query: 516 LESFSQKMETSLREPLAKGKNSNFLNSHSQLTGQTLVDLEPKS-KVSSPIEKVSPSCLTR 574
LE +K+E L+ LA+ + N QL + LE K ++S+ I K+ +
Sbjct: 1051 LERAKRKLEGDLK--LAQESTMDMENDKQQLDEK----LEKKEFEISNLISKIEDE---Q 1101
Query: 575 IIETNGHKIEEEDRALLLRILESIEDFAQELVECKSSRGSLSQE-KEMMQILQET-LTTS 632
+E K +E +A + + E IE + + R LS+E +E+ + L+E TS
Sbjct: 1102 AVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATS 1161
Query: 633 SQANLSVCRSPVGDKAKDTTSAVLIQQTPEVIKIQNK 669
+Q L+ R K + +Q V ++ K
Sbjct: 1162 AQVELNKKREAEFQKLRRDLEEATLQHEAMVAALRKK 1198
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 41.6 bits (96), Expect = 0.004
Identities = 64/316 (20%), Positives = 130/316 (41%), Gaps = 33/316 (10%)
Query: 335 EDVVQLSASDSGRFQTIELQNDKPNSRKMDTVQSIPNNSTNSLYNLEVNDPRTLKAVQVQ 394
E V ++ S +Q +++ KM ++ + NLE + ++ Q+
Sbjct: 1615 EIVAKMKESQEKEYQFLKMTAVNETQEKMCEIEHLKEQFETQKLNLENIETENIRLTQIL 1674
Query: 395 SQSLTMNPLENVSSDDLM---ETLYIEEESDGKKALDKGQKTENGPSHELLKVNEHRAEF 451
++L DDL ETL +E + K+ L + + EL V+ H E
Sbjct: 1675 HENLEEMRSVTKERDDLRSVEETLKVERD-QLKENLRETITRDLEKQEELKIVHMHLKEH 1733
Query: 452 PEHATHLKKCPTPMQNEIG---KIFEKSFVNLPKEDCK----SKVSKFEEGDQRDFTN-- 502
E L+ + NEI K E S L +D K +++ +Q++ +
Sbjct: 1734 QETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQQETIDKL 1793
Query: 503 ----SSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNSNFLNSHSQLTGQTLVDLEPKS 558
S +++ + DLE+ + K++ ++E A N H +T + D+
Sbjct: 1794 RGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKA--------NEHQLITLKK--DVNETQ 1843
Query: 559 KVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIEDFAQELVECKSSRGSLSQE 618
K S +E++ + + + K+E E+ L ++ E++E+ + E R +L +
Sbjct: 1844 KKVSEMEQLKKQIKDQSLTLS--KLEIENLNLAQKLHENLEEMKSVMKE----RDNLRRV 1897
Query: 619 KEMMQILQETLTTSSQ 634
+E +++ ++ L S Q
Sbjct: 1898 EETLKLERDQLKESLQ 1913
Score = 32.0 bits (71), Expect = 3.5
Identities = 93/486 (19%), Positives = 193/486 (39%), Gaps = 58/486 (11%)
Query: 172 PSFGLLRSSSVEEKPLSHRNSLDTNLTSMFLQNFSEEDLVTQILEKHKIDNF-----SSG 226
P+ LL ++E + S R D + +E++ ++ EK+ +D F +
Sbjct: 486 PATKLLNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTK 545
Query: 227 TDIKMCLDILLKCSEDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSETVYMNVMTRLA 286
D +M L + ++L K ++ Q ++ + S + + + E + + +L
Sbjct: 546 KDQEMQLIHEISNLKNLVKHAEVYNQDLENELSSKV------ELLREKE----DQIKKLQ 595
Query: 287 SYLKKLPFEFMQSGNNEALDLTELISNMPSLQLTPFSPVFGTEQPPKYEDVVQLSASDSG 346
Y+ E ++ + +L E I + ++ T F + V L A
Sbjct: 596 EYIDSQKLENIKMDLSYSL---ESIEDPKQMKQTLFD-----------AETVALDAKRES 641
Query: 347 RFQTIELQNDKPNSRKMDTVQSIPNNSTNSLYNLEVNDPRTLKAVQVQSQSLTMNPLENV 406
F E K +++ T N LY ++ + ++ + N + +
Sbjct: 642 AFLRSENLELKEKMKELATTYKQMENDI-QLYQSQLEAKKKMQVDLEKELQSAFNEITKL 700
Query: 407 SS-------DDLMETLYIEEE-SDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHL 458
+S DL+ L +E + +D +K L+K + E++ ++E ++ P L
Sbjct: 701 TSLIDGKVPKDLLCNLELEGKITDLQKELNKEVEENEALREEVILLSELKS-LPSEVERL 759
Query: 459 KKCPTPMQNEIGKIF---EKSFVNLPKEDCKSKVSKFEEGDQRD--FTNSSSQEEIDKLL 513
+K E+ I +K F + ++ + + E G +D T S+ + D+
Sbjct: 760 RKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEF 819
Query: 514 MDLES----FSQKMETSLREPLAKGKNSNFLNSHSQLTGQTLVDLEPK-SKVSSPIEKVS 568
+ ++ F QK + L E + L+ +Q +L L+ + S + +++ +
Sbjct: 820 QNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKT 879
Query: 569 PSCLTRIIETNGHKIEEEDRALLLRILES-----IEDFAQELVECKSSRGSLSQEKEMMQ 623
R+ E K + E+R L+ +E E Q L E K +L+QEK+ ++
Sbjct: 880 REVQERLNEMEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVK----TLTQEKDDLK 935
Query: 624 ILQETL 629
LQE+L
Sbjct: 936 QLQESL 941
Score = 31.2 bits (69), Expect = 5.9
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 491 KFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNSNFLNSHSQLTGQT 550
KF+E + + + ++ + + LE +++ +RE LAK + S + Q
Sbjct: 1336 KFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQ--SKQEQSLNMK 1393
Query: 551 LVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIEDFAQELVECKS 610
D E +K+ S +E+ P +D ALL RI + ++ L E
Sbjct: 1394 EKDNET-TKIVSEMEQFKP----------------KDSALL-RIEIEMLGLSKRLQESHD 1435
Query: 611 SRGSLSQEKEMMQILQETLTTSS 633
S+++EK+ +Q LQE L + S
Sbjct: 1436 EMKSVAKEKDDLQRLQEVLQSES 1458
>gi|22027634 diacylglycerol kinase, beta isoform 2 [Homo sapiens]
Length = 773
Score = 40.0 bits (92), Expect = 0.013
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 884 EEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIE------ 937
+++ +NQ D+ E F + F E + D + + +S N SS +++
Sbjct: 50 KQDILNQTIDF---EGFKLFMKTFLEAELPDD-FTAHLFMSFSNKFPHSSPMVKSKPALL 105
Query: 938 ----RIFSGAVTRGKTIQKEGRMS-----YADFVWFLISEEDKRNPTSIEYWFRCMDVDG 988
R+ GA+T +T S D V +L E R +E+ FR D DG
Sbjct: 106 SGGLRMNKGAITPPRTTSPANTCSPEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDG 165
Query: 989 DGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRD 1041
+G L ELE + E + + + +L +M++ + DG ++L +
Sbjct: 166 NGFLDSSELENIISQMMHVAEYLEWDVTELNPILHEMMEEIDYDHDGTVSLEE 218
>gi|22027632 diacylglycerol kinase, beta isoform 1 [Homo sapiens]
Length = 804
Score = 40.0 bits (92), Expect = 0.013
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 884 EEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIE------ 937
+++ +NQ D+ E F + F E + D + + +S N SS +++
Sbjct: 50 KQDILNQTIDF---EGFKLFMKTFLEAELPDD-FTAHLFMSFSNKFPHSSPMVKSKPALL 105
Query: 938 ----RIFSGAVTRGKTIQKEGRMS-----YADFVWFLISEEDKRNPTSIEYWFRCMDVDG 988
R+ GA+T +T S D V +L E R +E+ FR D DG
Sbjct: 106 SGGLRMNKGAITPPRTTSPANTCSPEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDG 165
Query: 989 DGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQMLDLVKPAVDGKITLRD 1041
+G L ELE + E + + + +L +M++ + DG ++L +
Sbjct: 166 NGFLDSSELENIISQMMHVAEYLEWDVTELNPILHEMMEEIDYDHDGTVSLEE 218
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 39.7 bits (91), Expect = 0.017
Identities = 67/297 (22%), Positives = 123/297 (41%), Gaps = 39/297 (13%)
Query: 444 VNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNLPKEDCKSKVS------------K 491
V EH A PE T + +P Q+ G + P ++ S +
Sbjct: 1306 VEEHCAS-PEDKT--LEVVSPSQSVTGSAGHTPYYQSPTDEKSSHLPTEVIEKPPAVPVS 1362
Query: 492 FEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNS---NFLNSHSQLTG 548
FE D +D +S +D+ + D ES +K+ + LR P G S +FL++ + +G
Sbjct: 1363 FEFSDAKDENERASVSPMDEPVPDSESPIEKVLSPLRSPPLIGSESAYESFLSADDKASG 1422
Query: 549 QTLVD-LEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIEDFAQEL-- 605
+ E KS ++VSP ++ + T+ ++ ++E ++ ++ EDF QE
Sbjct: 1423 RGAESPFEEKSGKQGSPDQVSP--VSEMTSTSLYQDKQEGKSTDFAPIK--EDFGQEKKT 1478
Query: 606 --VECKSSRGSLSQEKEMMQILQETLTTSSQ-------ANLSVCRSPVGDKAKDTTSAVL 656
VE SS+ +L+ ++ + + T SQ +S+ V DK+ +
Sbjct: 1479 DDVEAMSSQPALALDERKLGDVSPTQIDVSQFGSFKEDTKMSISEGTVSDKSATPVDEGV 1538
Query: 657 IQQTPEVIK--IQNKPEKKPGTPLPPPATSPSSPRPLSPV--PHVNNVVNAPLSINI 709
+ T ++ + P P T SP + V PH + V+ LS+++
Sbjct: 1539 AEDTYSHMEGVASVSTASVATSSFPEPTTDDVSPSLHAEVGSPH-STEVDDSLSVSV 1594
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 38.5 bits (88), Expect = 0.037
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 555 EPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIEDFAQELVECKSSRGS 614
E K+K+ + P L +++ G KIEEE A+ + LE E + +E SS
Sbjct: 83 EQKAKLEKFSSALQPGTLLDLLQVEGMKIEEESEAMAEKFLEG-EVPLETFLENFSSMRM 141
Query: 615 LSQEKEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQTPEVIKIQNKPE-KK 673
LS + + + + +A+ + + V Q TP V++ Q +P
Sbjct: 142 LSHLRRVRVEKLQEVVRKPRASQELAGDAPPPRPPPPVRPV-PQGTPPVVEEQPQPPLAM 200
Query: 674 PGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLS-INIPRFY 713
P PLP SPS P+ P H + AP ++ P FY
Sbjct: 201 PPYPLP---YSPSPSLPVGPTAH-GALPPAPFPVVSQPSFY 237
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 38.1 bits (87), Expect = 0.048
Identities = 58/224 (25%), Positives = 86/224 (38%), Gaps = 31/224 (13%)
Query: 381 EVNDPRTLKAVQVQSQSLTMNPLENVSSDDLMETLYIEEESDGKK----------ALDKG 430
+V++ L+ + S N L+NVS TL E E G K L
Sbjct: 1267 KVSEGDRLRVELAEKASKLQNELDNVS------TLLEEAEKKGIKFAKDAASLESQLQDT 1320
Query: 431 QKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNLPKE--DCKSK 488
Q+ + + L ++ + E L++ + E K EK + L + D K K
Sbjct: 1321 QELLQEETRQKLNLSSRIRQLEEEKNSLQE-QQEEEEEARKNLEKQVLALQSQLADTKKK 1379
Query: 489 VSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNSNFLNSHSQLTG 548
V D T S +E KLL D E+ SQ++E + LA K N Q
Sbjct: 1380 V------DDDLGTIESLEEAKKKLLKDAEALSQRLE---EKALAYDKLEKTKNRLQQELD 1430
Query: 549 QTLVDLEPKSKVSSPIEKVS---PSCLTRIIETNGHKIEEEDRA 589
VDL+ + +V+S +EK L + EE DRA
Sbjct: 1431 DLTVDLDHQRQVASNLEKKQKKFDQLLAEEKSISARYAEERDRA 1474
Score = 35.8 bits (81), Expect = 0.24
Identities = 40/197 (20%), Positives = 87/197 (44%), Gaps = 20/197 (10%)
Query: 440 ELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNLPKEDCKSKVSKFEEGDQRD 499
ELLKV E + + +++ + E N+ E +++ F E ++
Sbjct: 860 ELLKVKEKQTKVEGELEEMERKHQQLLEE---------KNILAEQLQAETELFAEAEEMR 910
Query: 500 FTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKNSNFLNSHSQLTGQTLVDLEPKSK 559
++ ++E++++L DLES ++ E R + + + + +H Q + L D E ++
Sbjct: 911 ARLAAKKQELEEILHDLESRVEEEEE--RNQILQNEKKK-MQAHIQDLEEQL-DEEEGAR 966
Query: 560 VSSPIEKVSPSCLTR-------IIETNGHKIEEEDRALLLRILESIEDFAQELVECKSSR 612
+EKV+ + ++E K +E + + RI E A+E + K+
Sbjct: 967 QKLQLEKVTAEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIAECSSQLAEEEEKAKNLA 1026
Query: 613 GSLSQEKEMMQILQETL 629
++++ M+ L+E L
Sbjct: 1027 KIRNKQEVMISDLEERL 1043
>gi|44955929 calmodulin regulated spectrin-associated protein 1-like
1 [Homo sapiens]
Length = 1478
Score = 37.7 bits (86), Expect = 0.063
Identities = 69/317 (21%), Positives = 111/317 (35%), Gaps = 52/317 (16%)
Query: 417 IEEESDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKS 476
I EE+ + D Q + H +K+ E R ++ T + ++G+ +
Sbjct: 730 IPEETGLPQGRDTTQLLASEMVHLRMKLEEKRRAIEAQKKKMEAAFTKQRQKMGRTAFLT 789
Query: 477 FVNLPKEDCKSKVSKFEEG--DQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKG 534
V K D S + + G D++ +T+ + ++E K ++ S+ P AK
Sbjct: 790 VVK-KKGDGISPLREEAAGAEDEKVYTDRAKEKESQKTDGQRSKSLADIKESMENPQAKW 848
Query: 535 KNSNFLNSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDRALLLRI 594
S T +D E + ++SP E E + +L
Sbjct: 849 LKSP----------TTPIDPEKQWNLASPSE------------------ETLNEGEILEY 880
Query: 595 LESIEDFAQELVECKSSRGSLSQEKEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSA 654
+SIE + SS L QE + + + QE L + V P
Sbjct: 881 TKSIE-------KLNSSLHFLQQEMQRLSLQQEMLMQMREQQSWVISPP----------- 922
Query: 655 VLIQQTPEVIKIQNKPEKKPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPRFYF 714
Q +P+ KP K+ G S SPRP P P +N +A S+ R
Sbjct: 923 ---QPSPQKQIRDFKPSKQAGLSSAIAPFSSDSPRPTHPSPQSSNRKSASFSVKSQRTPR 979
Query: 715 PEGLPDTCSNHEQTLSR 731
P L T N T R
Sbjct: 980 PNELKITPLNRTLTPPR 996
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 37.4 bits (85), Expect = 0.083
Identities = 77/353 (21%), Positives = 149/353 (42%), Gaps = 49/353 (13%)
Query: 366 VQSIPNNSTNSLYNLEVNDPRTLKAVQVQSQSLTMNPLENVSSDDLMETLYIEEESDGKK 425
VQ + + T + E + + +V++Q +T+ L+ + +TL + E+
Sbjct: 105 VQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKE-KIREYEQTLKNQAETI--- 160
Query: 426 ALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNLPKEDC 485
AL+K QK +N + + K+ E + + +Q + K + F D
Sbjct: 161 ALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELF------DL 214
Query: 486 KSKVSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMET------SLREPLAKGKNSNF 539
K+K D ++ +EI+ ++ DLE +Q+ E +LRE L+ +S
Sbjct: 215 KTKY---------DEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQ 265
Query: 540 LNSHSQ-----------LTGQTL-VDLEPKSK-VSSPIEKVS--PSCLTRIIETNGHKIE 584
L S Q LT +L V+L K + ++ +E V + LT++ E + +I
Sbjct: 266 LASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQIS 325
Query: 585 EEDRALLLR--ILESIEDFAQELVECKSSRGSLSQEKEMMQILQETLTTSSQAN-LSVCR 641
+ ++ L + L+ +E+ + + + + L+ K M E T A L V
Sbjct: 326 QLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLL 385
Query: 642 SPVGDKAKDTTSAVLIQQT----PEVIKIQNKPE-KKPGT-PLPPPATSPSSP 688
+ +A+ I + K +++PE ++PG+ P PPP+ P +P
Sbjct: 386 LEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGSLPAPPPSQLPRNP 438
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 37.4 bits (85), Expect = 0.083
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 21/210 (10%)
Query: 450 EFPEHATHLKKCPTPMQNEIGKIFEKSFVNLPK--EDCKSKVSKFEEGDQRDFTNSSSQE 507
E + T L+K + ++ E+ K E S L K E C+S + + Q+ + +
Sbjct: 927 ELEDTQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGTAR 986
Query: 508 EIDKLLMDLESFSQKMETSLREPLAKGKNSNF-LNSHSQLTGQTLVDLEPKSKVSSPIEK 566
++ + + KME + G+N L+ + QT +LE K+ +EK
Sbjct: 987 QVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKELEK 1046
Query: 567 VSPSCLTRIIETNGHKIEEEDRALLLRILESIEDFAQELVECKSSRGSLSQEKEMMQ--- 623
+ S T + E + R +L L++ E KS+ L + ++++Q
Sbjct: 1047 LQHSTETELTEA------LQKREVLETELQNAHG------ELKSTLRQLQELRDVLQKAQ 1094
Query: 624 -ILQETLTTSSQ--ANLSVCRSPVGDKAKD 650
L+E TT A L C+ + DK ++
Sbjct: 1095 LSLEEKYTTIKDLTAELRECKMEIEDKKQE 1124
>gi|206597470 neural precursor cell expressed, developmentally
down-regulated 1 isoform c [Homo sapiens]
Length = 571
Score = 36.6 bits (83), Expect = 0.14
Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 23/275 (8%)
Query: 99 RGSTFQNTYNLKDIAGEAISFASGKIKEFSFEKLKNSNHAAYRKGRKVKSDSFNRRSVDL 158
RG +Q + + IS ++ +F+ ++ KG K + N+RSV++
Sbjct: 180 RGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNV 239
Query: 159 DLLCGHYNNDGNAPSFGLLRSSSVEEKPLSHRNSLDTNLT--SMFLQNFSEEDLVTQILE 216
+ G N G ++V +P++ T L D +++ +
Sbjct: 240 NAASGGVQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETD 299
Query: 217 KHKIDNFSSGTDI-KMCLDILLKCSEDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSE 275
K +FSS D K L + D + K S SI +G G D +
Sbjct: 300 SGKNQDFSSFDDTGKSSLGDMFSPIRD--------DAVVNKGSDESIGKGDGFDFLPQLN 351
Query: 276 TVY---MNVMTRLASYLKKLPFE-FMQSGNNEALDLTELISNMPSLQLTPFSPVFGTEQP 331
+V+ N +T S L P FM S E + +L + + + E
Sbjct: 352 SVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGK------QESK 405
Query: 332 PKYEDVVQL--SASDSGRFQTIELQNDKPNSRKMD 364
++ + +L S ++SG T N NS K +
Sbjct: 406 DSFKQLAKLVTSGAESGNLNTSPSSNQTRNSEKFE 440
>gi|206597468 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 36.6 bits (83), Expect = 0.14
Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 23/275 (8%)
Query: 99 RGSTFQNTYNLKDIAGEAISFASGKIKEFSFEKLKNSNHAAYRKGRKVKSDSFNRRSVDL 158
RG +Q + + IS ++ +F+ ++ KG K + N+RSV++
Sbjct: 269 RGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNV 328
Query: 159 DLLCGHYNNDGNAPSFGLLRSSSVEEKPLSHRNSLDTNLT--SMFLQNFSEEDLVTQILE 216
+ G N G ++V +P++ T L D +++ +
Sbjct: 329 NAASGGVQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETD 388
Query: 217 KHKIDNFSSGTDI-KMCLDILLKCSEDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSE 275
K +FSS D K L + D + K S SI +G G D +
Sbjct: 389 SGKNQDFSSFDDTGKSSLGDMFSPIRD--------DAVVNKGSDESIGKGDGFDFLPQLN 440
Query: 276 TVY---MNVMTRLASYLKKLPFE-FMQSGNNEALDLTELISNMPSLQLTPFSPVFGTEQP 331
+V+ N +T S L P FM S E + +L + + + E
Sbjct: 441 SVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGK------QESK 494
Query: 332 PKYEDVVQL--SASDSGRFQTIELQNDKPNSRKMD 364
++ + +L S ++SG T N NS K +
Sbjct: 495 DSFKQLAKLVTSGAESGNLNTSPSSNQTRNSEKFE 529
>gi|23097254 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 36.6 bits (83), Expect = 0.14
Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 23/275 (8%)
Query: 99 RGSTFQNTYNLKDIAGEAISFASGKIKEFSFEKLKNSNHAAYRKGRKVKSDSFNRRSVDL 158
RG +Q + + IS ++ +F+ ++ KG K + N+RSV++
Sbjct: 269 RGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNV 328
Query: 159 DLLCGHYNNDGNAPSFGLLRSSSVEEKPLSHRNSLDTNLT--SMFLQNFSEEDLVTQILE 216
+ G N G ++V +P++ T L D +++ +
Sbjct: 329 NAASGGVQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETD 388
Query: 217 KHKIDNFSSGTDI-KMCLDILLKCSEDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSE 275
K +FSS D K L + D + K S SI +G G D +
Sbjct: 389 SGKNQDFSSFDDTGKSSLGDMFSPIRD--------DAVVNKGSDESIGKGDGFDFLPQLN 440
Query: 276 TVY---MNVMTRLASYLKKLPFE-FMQSGNNEALDLTELISNMPSLQLTPFSPVFGTEQP 331
+V+ N +T S L P FM S E + +L + + + E
Sbjct: 441 SVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGK------QESK 494
Query: 332 PKYEDVVQL--SASDSGRFQTIELQNDKPNSRKMD 364
++ + +L S ++SG T N NS K +
Sbjct: 495 DSFKQLAKLVTSGAESGNLNTSPSSNQTRNSEKFE 529
>gi|206597465 neural precursor cell expressed, developmentally
down-regulated 1 isoform a [Homo sapiens]
Length = 667
Score = 36.6 bits (83), Expect = 0.14
Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 23/275 (8%)
Query: 99 RGSTFQNTYNLKDIAGEAISFASGKIKEFSFEKLKNSNHAAYRKGRKVKSDSFNRRSVDL 158
RG +Q + + IS ++ +F+ ++ KG K + N+RSV++
Sbjct: 276 RGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNV 335
Query: 159 DLLCGHYNNDGNAPSFGLLRSSSVEEKPLSHRNSLDTNLT--SMFLQNFSEEDLVTQILE 216
+ G N G ++V +P++ T L D +++ +
Sbjct: 336 NAASGGVQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETD 395
Query: 217 KHKIDNFSSGTDI-KMCLDILLKCSEDLKKCTDIIKQCIKKKSGSSISEGSGNDTISSSE 275
K +FSS D K L + D + K S SI +G G D +
Sbjct: 396 SGKNQDFSSFDDTGKSSLGDMFSPIRD--------DAVVNKGSDESIGKGDGFDFLPQLN 447
Query: 276 TVY---MNVMTRLASYLKKLPFE-FMQSGNNEALDLTELISNMPSLQLTPFSPVFGTEQP 331
+V+ N +T S L P FM S E + +L + + + E
Sbjct: 448 SVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGK------QESK 501
Query: 332 PKYEDVVQL--SASDSGRFQTIELQNDKPNSRKMD 364
++ + +L S ++SG T N NS K +
Sbjct: 502 DSFKQLAKLVTSGAESGNLNTSPSSNQTRNSEKFE 536
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 36.6 bits (83), Expect = 0.14
Identities = 89/398 (22%), Positives = 157/398 (39%), Gaps = 57/398 (14%)
Query: 306 DLTELISNMPSL--QLTPFSPVFGT--EQPPKYEDVVQLSASDSGRFQTIELQNDKPNSR 361
+L +L S + SL QLT S EQ E ++ R Q ++QN K +
Sbjct: 2306 ELAKLESELKSLKDQLTDLSNSLEKCKEQKGNLEGII--------RQQEADIQNSKFSYE 2357
Query: 362 KMDTVQSIPNNSTNSLYN-LEVNDPRTL-------KAVQV------QSQSLTMNPLENVS 407
+++T T+ L+ + + + + + +A+QV Q + LEN+
Sbjct: 2358 QLETDLQASRELTSRLHEEINMKEQKIISLLSGKEEAIQVAIAELRQQHDKEIKELENLL 2417
Query: 408 SDDLMETLYIEEESDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQN 467
S + E + +EEE+ KKA+DK N L + + + K + +QN
Sbjct: 2418 SQEEEENIVLEEEN--KKAVDK----TNQLMETLKTIKKENIQQKAQLDSFVKSMSSLQN 2471
Query: 468 EIGKIFEKSFVNLPKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKL---LMDLESFSQKME 524
+ +I + L + + K + + N+ +EEI L + DL S + K++
Sbjct: 2472 DRDRIV-GDYQQLEERHLSIILEKDQLIQEAAAENNKLKEEIRGLRSHMDDLNSENAKLD 2530
Query: 525 TSL---REPLAKGKNSNFLNSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGH 581
L RE L N SQ V L+ ++ + K+
Sbjct: 2531 AELIQYREDL----NQVITIKDSQQKQLLEVQLQQNKELENKYAKLEEKL---------- 2576
Query: 582 KIEEEDRALLLRILESIEDFAQEL-VECKSSRGSLSQEKEMMQILQETLTTS-SQANLSV 639
K EE L R ++++ Q+L E +S + S+SQ + LQE T A L V
Sbjct: 2577 KESEEANEDLRRSFNALQEEKQDLSKEIESLKVSISQLTRQVTALQEEGTLGLYHAQLKV 2636
Query: 640 CRSPVGDKAK--DTTSAVLIQQTPEVIKIQNKPEKKPG 675
V + ++ + + E++ +Q + KK G
Sbjct: 2637 KEEEVHRLSALFSSSQKRIAELEEELVCVQKEAAKKVG 2674
>gi|111074532 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 1 [Homo sapiens]
Length = 953
Score = 36.2 bits (82), Expect = 0.18
Identities = 79/362 (21%), Positives = 139/362 (38%), Gaps = 46/362 (12%)
Query: 335 EDVVQLSASDSGRFQTIELQNDKPNSRKMDTVQSIP---NNSTNSLYNLEVNDPRTLKAV 391
E+V QL S + + ++ + ++V S P N S++S+ N D K
Sbjct: 159 EEVSQLRHELSMKDELLQFYTSAAEESEPESVCSTPLKRNESSSSVQNYFHLDSLQKKLK 218
Query: 392 QVQSQSLTMNPLENVSSDDLMETLYIEEE-----SDGKKALDKGQKTENGPSHELLKVNE 446
++ +++ L + +S ET+ EE+ +D K L S EL K E
Sbjct: 219 DLEEENVV---LRSEASQLKTETITYEEKEQQLVNDCVKELRDANVQIASISEELAKKTE 275
Query: 447 HRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNLPKEDCKSKVSKFEEGDQRDFTNSSSQ 506
A E THL V+L K+ K+ + EE Q +Q
Sbjct: 276 DAARQQEEITHLLS---------------QIVDLQKK-AKACAVENEELVQHLGAAKDAQ 319
Query: 507 EEIDKLLMDLES-FSQKMET--SLREPLAKGKNSNFLNSHSQLTGQTLVDLEPKSKVSSP 563
++ L +LE +++ ME +E L +N N+ S+ + L P +++
Sbjct: 320 RQLTAELRELEDKYAECMEMLHEAQEELKNLRNKTMPNTTSRRYHS--LGLFPMDSLAAE 377
Query: 564 IEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIEDFAQELVECKSSRGSLS-----QE 618
IE T E + E D R+ E++ + Q + + + ++ Q
Sbjct: 378 IEG------TMRKELQLEEAESPDITHQKRVFETVRNINQVVKQRSLTPSPMNIPGSNQS 431
Query: 619 KEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQTPEVIKIQNKPEKKPGTPL 678
M +L ++T S S +G+ D + +I +T ++ KKPGTP
Sbjct: 432 SAMNSLLSSCVSTPRS---SFYGSDIGNVVLDNKTNSIILETEAADLGNDERSKKPGTPG 488
Query: 679 PP 680
P
Sbjct: 489 TP 490
>gi|45359873 OGT(O-Glc-NAc transferase)-interacting protein 106 KDa
isoform 2 [Homo sapiens]
Length = 686
Score = 36.2 bits (82), Expect = 0.18
Identities = 79/362 (21%), Positives = 139/362 (38%), Gaps = 46/362 (12%)
Query: 335 EDVVQLSASDSGRFQTIELQNDKPNSRKMDTVQSIP---NNSTNSLYNLEVNDPRTLKAV 391
E+V QL S + + ++ + ++V S P N S++S+ N D K
Sbjct: 101 EEVSQLRHELSMKDELLQFYTSAAEESEPESVCSTPLKRNESSSSVQNYFHLDSLQKKLK 160
Query: 392 QVQSQSLTMNPLENVSSDDLMETLYIEEE-----SDGKKALDKGQKTENGPSHELLKVNE 446
++ +++ L + +S ET+ EE+ +D K L S EL K E
Sbjct: 161 DLEEENVV---LRSEASQLKTETITYEEKEQQLVNDCVKELRDANVQIASISEELAKKTE 217
Query: 447 HRAEFPEHATHLKKCPTPMQNEIGKIFEKSFVNLPKEDCKSKVSKFEEGDQRDFTNSSSQ 506
A E THL V+L K+ K+ + EE Q +Q
Sbjct: 218 DAARQQEEITHLLS---------------QIVDLQKK-AKACAVENEELVQHLGAAKDAQ 261
Query: 507 EEIDKLLMDLES-FSQKMET--SLREPLAKGKNSNFLNSHSQLTGQTLVDLEPKSKVSSP 563
++ L +LE +++ ME +E L +N N+ S+ + L P +++
Sbjct: 262 RQLTAELRELEDKYAECMEMLHEAQEELKNLRNKTMPNTTSRRYHS--LGLFPMDSLAAE 319
Query: 564 IEKVSPSCLTRIIETNGHKIEEEDRALLLRILESIEDFAQELVECKSSRGSLS-----QE 618
IE T E + E D R+ E++ + Q + + + ++ Q
Sbjct: 320 IEG------TMRKELQLEEAESPDITHQKRVFETVRNINQVVKQRSLTPSPMNIPGSNQS 373
Query: 619 KEMMQILQETLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQTPEVIKIQNKPEKKPGTPL 678
M +L ++T S S +G+ D + +I +T ++ KKPGTP
Sbjct: 374 SAMNSLLSSCVSTPRS---SFYGSDIGNVVLDNKTNSIILETEAADLGNDERSKKPGTPG 430
Query: 679 PP 680
P
Sbjct: 431 TP 432
>gi|58331242 formin homology 2 domain containing 3 [Homo sapiens]
Length = 1439
Score = 35.0 bits (79), Expect = 0.41
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 570 SCLTRI--IETNGHKIEEEDRALLLRILE---SIEDFAQELVECKSSRGSLSQEKEMMQI 624
S TRI ++ N +E R + + L+ S++ FA++ RGS+S + E
Sbjct: 729 SLATRISTLQANSQTQDESVRRVDVGCLDNRGSVKAFAEKFNSGDLGRGSISPDAEPNDK 788
Query: 625 LQETL-----TTSSQANLSVCRSPVGDKAKDTTSAVLIQQTP-EVIKIQNKPEKKPGTPL 678
+ ET T S + +P + +D L ++ +V+ + + PG P
Sbjct: 789 VPETAPVQPKTESDYIWDQLMANPRELRIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPP 848
Query: 679 PPPATSPSSPRPLSPVPHVNNVVNAPLSINI-----PRFYFPEGL 718
PPP T P P P P ++++ P+ N+ P F P+GL
Sbjct: 849 PPPPTFLGLPPP-PPPPLLDSIPPPPVPGNLLVPPPPVFNAPQGL 892
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 35.0 bits (79), Expect = 0.41
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 628 TLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQTPEVIKIQNKPEKKPG-----TPLPPPA 682
TLT SS L+ P+ ++ T L +P + N P P TP P
Sbjct: 17 TLTPSSTPTLTPSSQPILTRSSTPT---LTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPT 73
Query: 683 TSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIET 734
+PSS L+P P + L+ + P P P ++ TL+ T
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNT 125
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 35.0 bits (79), Expect = 0.41
Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 628 TLTTSSQANLSVCRSPVGDKAKDTTSAVLIQQTPEVIKIQNKPEKKPG-----TPLPPPA 682
TLT SS L+ P+ ++ T L +P + N P P TP P
Sbjct: 17 TLTPSSTPTLTPSSQPILTRSSTPT---LTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPT 73
Query: 683 TSPSSPRPLSPVPHVNNVVNAPLSINIPRFYFPEGLPDTCSNHEQTLSRIET 734
+PSS L+P P + L+ + P P P ++ TL+ T
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNT 125
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 35.0 bits (79), Expect = 0.41
Identities = 44/225 (19%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 417 IEEESDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKS 476
++EE + K+ L++ T N +++++ + + + A+ ++ E K F+K
Sbjct: 1352 LDEEMEAKQNLERHISTLN------IQLSDSKKKLQDFASTVEAL-----EEGKKRFQKE 1400
Query: 477 FVNLPKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKN 536
NL ++ + K + + D+ + T + Q+E+D L++DL++ +++ ++L + K +
Sbjct: 1401 IENLTQQ-YEEKAAAY---DKLEKTKNRLQQELDDLVVDLDN-QRQLVSNLEK---KQRK 1452
Query: 537 SNFLNSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDR------AL 590
+ L + + D +++ + ++ L R +E EE +R A
Sbjct: 1453 FDQLLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAE 1512
Query: 591 LLRILESIEDFAQELVECKSSRGSLSQEKEMMQILQETLTTSSQA 635
+ ++ S +D + + E + S+ +L + E M+ E L QA
Sbjct: 1513 MEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQA 1557
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 35.0 bits (79), Expect = 0.41
Identities = 44/225 (19%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 417 IEEESDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKS 476
++EE + K+ L++ T N +++++ + + + A+ ++ E K F+K
Sbjct: 1359 LDEEMEAKQNLERHISTLN------IQLSDSKKKLQDFASTVEAL-----EEGKKRFQKE 1407
Query: 477 FVNLPKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKN 536
NL ++ + K + + D+ + T + Q+E+D L++DL++ +++ ++L + K +
Sbjct: 1408 IENLTQQ-YEEKAAAY---DKLEKTKNRLQQELDDLVVDLDN-QRQLVSNLEK---KQRK 1459
Query: 537 SNFLNSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDR------AL 590
+ L + + D +++ + ++ L R +E EE +R A
Sbjct: 1460 FDQLLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAE 1519
Query: 591 LLRILESIEDFAQELVECKSSRGSLSQEKEMMQILQETLTTSSQA 635
+ ++ S +D + + E + S+ +L + E M+ E L QA
Sbjct: 1520 MEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQA 1564
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 35.0 bits (79), Expect = 0.41
Identities = 44/225 (19%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 417 IEEESDGKKALDKGQKTENGPSHELLKVNEHRAEFPEHATHLKKCPTPMQNEIGKIFEKS 476
++EE + K+ L++ T N +++++ + + + A+ ++ E K F+K
Sbjct: 1359 LDEEMEAKQNLERHISTLN------IQLSDSKKKLQDFASTVEAL-----EEGKKRFQKE 1407
Query: 477 FVNLPKEDCKSKVSKFEEGDQRDFTNSSSQEEIDKLLMDLESFSQKMETSLREPLAKGKN 536
NL ++ + K + + D+ + T + Q+E+D L++DL++ +++ ++L + K +
Sbjct: 1408 IENLTQQ-YEEKAAAY---DKLEKTKNRLQQELDDLVVDLDN-QRQLVSNLEK---KQRK 1459
Query: 537 SNFLNSHSQLTGQTLVDLEPKSKVSSPIEKVSPSCLTRIIETNGHKIEEEDR------AL 590
+ L + + D +++ + ++ L R +E EE +R A
Sbjct: 1460 FDQLLAEEKNISSKYADERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAE 1519
Query: 591 LLRILESIEDFAQELVECKSSRGSLSQEKEMMQILQETLTTSSQA 635
+ ++ S +D + + E + S+ +L + E M+ E L QA
Sbjct: 1520 MEDLVSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQA 1564
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,946,426
Number of Sequences: 37866
Number of extensions: 2181355
Number of successful extensions: 12482
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 11700
Number of HSP's gapped (non-prelim): 945
length of query: 1150
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1037
effective length of database: 13,968,660
effective search space: 14485500420
effective search space used: 14485500420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.