Search of human proteins with 19743884

Search of human proteins with 19743884

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
         (749 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19743884 regulatory factor X3 isoform b [Homo sapiens]            1492   0.0  
gi|4506495 regulatory factor X3 isoform a [Homo sapiens]             1307   0.0  
gi|19743881 regulatory factor X2 isoform a [Homo sapiens]             902   0.0  
gi|19743879 regulatory factor X2 isoform b [Homo sapiens]             852   0.0  
gi|238859557 regulatory factor X1 [Homo sapiens]                      791   0.0  
gi|15011898 regulatory factor X4 isoform b [Homo sapiens]             277   3e-74
gi|47132527 regulatory factor X4 isoform c [Homo sapiens]             277   3e-74
gi|27734871 regulatory factor X, 6 [Homo sapiens]                     247   3e-65
gi|19743886 regulatory factor X4 isoform a [Homo sapiens]             192   1e-48
gi|224586784 hypothetical protein LOC731220 [Homo sapiens]             84   4e-16
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]    70   7e-12
gi|71040090 regulatory factor X, 5 [Homo sapiens]                      63   1e-09
gi|4557843 regulatory factor X, 5 [Homo sapiens]                       63   1e-09
gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Ho...    40   0.010
gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Ho...    37   0.051
gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Hom...    37   0.051
gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens]           36   0.11 
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ...    35   0.33 
gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens]           35   0.33 
gi|161016767 mucin 21 [Homo sapiens]                                   34   0.43 
gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Ho...    33   0.74 
gi|54792088 hypothetical protein LOC23506 [Homo sapiens]               33   0.74 
gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]           32   1.7  
gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]           32   1.7  
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]          32   2.2  
gi|119703744 desmoglein 1 preproprotein [Homo sapiens]                 32   2.8  
gi|45007002 longevity assurance homolog 6 [Homo sapiens]               32   2.8  
gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]         32   2.8  
gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]         32   2.8  
gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]            31   4.8  

>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
          Length = 749

 Score = 1492 bits (3862), Expect = 0.0
 Identities = 749/749 (100%), Positives = 749/749 (100%)

Query: 1   MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60
           MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
Sbjct: 1   MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60

Query: 61  EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120
           EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM
Sbjct: 61  EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120

Query: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180
           GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL
Sbjct: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180

Query: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240
           NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR
Sbjct: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240

Query: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300
           LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG
Sbjct: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300

Query: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360
           SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH
Sbjct: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360

Query: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420
           CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK
Sbjct: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420

Query: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480
           HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR
Sbjct: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480

Query: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540
           MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW
Sbjct: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540

Query: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600
           VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK
Sbjct: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600

Query: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDL 660
           WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDL
Sbjct: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDL 660

Query: 661 NAVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSL 720
           NAVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSL
Sbjct: 661 NAVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKTELSQAFPVGCMQPVLETGVQPSL 720

Query: 721 LNPIHSEHIVTSTQTIRQCSATGNTYTAV 749
           LNPIHSEHIVTSTQTIRQCSATGNTYTAV
Sbjct: 721 LNPIHSEHIVTSTQTIRQCSATGNTYTAV 749


>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
          Length = 707

 Score = 1307 bits (3383), Expect = 0.0
 Identities = 656/656 (100%), Positives = 656/656 (100%)

Query: 1   MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60
           MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV
Sbjct: 1   MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYV 60

Query: 61  EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120
           EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM
Sbjct: 61  EGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQM 120

Query: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180
           GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL
Sbjct: 121 GVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLL 180

Query: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240
           NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR
Sbjct: 181 NSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRR 240

Query: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300
           LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG
Sbjct: 241 LGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTG 300

Query: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360
           SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH
Sbjct: 301 SGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREH 360

Query: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420
           CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK
Sbjct: 361 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCK 420

Query: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480
           HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR
Sbjct: 421 HESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQR 480

Query: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540
           MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW
Sbjct: 481 MIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASW 540

Query: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600
           VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK
Sbjct: 541 VCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLK 600

Query: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE 656
           WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE
Sbjct: 601 WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE 656


>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
          Length = 723

 Score =  902 bits (2332), Expect = 0.0
 Identities = 478/723 (66%), Positives = 563/723 (77%), Gaps = 33/723 (4%)

Query: 1   MQTSETGSDTGSTVTLQTSVASQA--AVPTQVVQQV-----------PVQ-QQVQQV-QT 45
           MQ SE G+D+ ++V L+ S A+    A P +V+ Q            P+   +VQQV Q 
Sbjct: 1   MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60

Query: 46  VQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTT 105
           VQ VQHVYPAQVQYVEG D VYTNGAIRT      E QMY+ ++  +YF+  G  AQVT 
Sbjct: 61  VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGG-AQVTV 119

Query: 106 VVSS------HSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATI 159
             SS      HSMVG   I M V GG  I SS G YLI   M+++ HS+ HT+R+SPAT+
Sbjct: 120 AASSPPAVPSHSMVG---ITMDV-GGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPATL 175

Query: 160 EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP 219
           EMAIE LQKS+G+++H+S LLNSHLQWLLDNYETAEGVSLPRS+LYNHYLRHCQEHKLDP
Sbjct: 176 EMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP 235

Query: 220 VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM 279
           VNAASFGKLIRS+FMGLRTRRLGTRGNSKYHYYGIR+KPDSPLNRLQED QYMAMRQQPM
Sbjct: 236 VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM 295

Query: 280 QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS 339
            QK RY+P QK D + D  + SG  +  + EQT+  QSQHHQQ++D S   PEF   ++ 
Sbjct: 296 HQKPRYRPAQKTDSLGDSGSHSGLHS--TPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLG 353

Query: 340 S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTI 397
           S  L DG T  D+K+LQ +YR HCEA +DVV+NLQF  IEKLW +FW  S ++ +DG T 
Sbjct: 354 SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWN-SKASSSDGPTS 412

Query: 398 TESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQ 457
             +S+     + LPK KLI+LC+ + IL+WM +CDH +YQALVEILIPDVLRP+PS LTQ
Sbjct: 413 LPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQ 472

Query: 458 AIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTS 517
           AIRNFAKSLEGWL+NAM++ PQ++IQTKV  VSAFAQTLRRYTSLNHLAQAARAVLQNTS
Sbjct: 473 AIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTS 532

Query: 518 QINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVM 577
           QINQMLSDLNRVDFANVQEQASWVCQC++++VQRLE DFK+TLQQQS+L+QWA+WLD+V+
Sbjct: 533 QINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVV 592

Query: 578 MQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 637
            Q LK + G PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL
Sbjct: 593 TQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 652

Query: 638 VEHRVAQATGETPIAVMGEFGDLNAVSPGNLDKDEGSEVE--SEMDEELDDSSEPQAKRE 695
           VEHRVA+ATGETPIAVMGEF DL ++S   LDKD+  + +  SE   +     EP  KRE
Sbjct: 653 VEHRVAEATGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRE 712

Query: 696 KTE 698
           +++
Sbjct: 713 RSD 715


>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
          Length = 698

 Score =  852 bits (2201), Expect = 0.0
 Identities = 461/723 (63%), Positives = 540/723 (74%), Gaps = 58/723 (8%)

Query: 1   MQTSETGSDTGSTVTLQTSVASQA--AVPTQVVQQV-----------PVQ-QQVQQV-QT 45
           MQ SE G+D+ ++V L+ S A+    A P +V+ Q            P+   +VQQV Q 
Sbjct: 1   MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSNPKGAQMQPISLPRVQQVPQQ 60

Query: 46  VQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTT 105
           VQ VQHVYPAQVQYVEG D VYTNGAIRT      E QMY+ ++  +YF+  G  AQVT 
Sbjct: 61  VQPVQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSTASYFEAPGG-AQVTV 119

Query: 106 VVSS------HSMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPATI 159
             SS      HSMVG   I M V GG  I SS G YLI   M+++ HS+ HT+R+SPAT 
Sbjct: 120 AASSPPAVPSHSMVG---ITMDV-GGSPIVSSAGAYLIHGGMDSTRHSLAHTSRSSPAT- 174

Query: 160 EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP 219
                                   LQWLLDNYETAEGVSLPRS+LYNHYLRHCQEHKLDP
Sbjct: 175 ------------------------LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP 210

Query: 220 VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM 279
           VNAASFGKLIRS+FMGLRTRRLGTRGNSKYHYYGIR+KPDSPLNRLQED QYMAMRQQPM
Sbjct: 211 VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM 270

Query: 280 QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS 339
            QK RY+P QK D + D  + SG  +  + EQT+  QSQHHQQ++D S   PEF   ++ 
Sbjct: 271 HQKPRYRPAQKTDSLGDSGSHSGLHS--TPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLG 328

Query: 340 S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTI 397
           S  L DG T  D+K+LQ +YR HCEA +DVV+NLQF  IEKLW +FW  S ++ +DG T 
Sbjct: 329 SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWN-SKASSSDGPTS 387

Query: 398 TESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQ 457
             +S+     + LPK KLI+LC+ + IL+WM +CDH +YQALVEILIPDVLRP+PS LTQ
Sbjct: 388 LPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQ 447

Query: 458 AIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTS 517
           AIRNFAKSLEGWL+NAM++ PQ++IQTKV  VSAFAQTLRRYTSLNHLAQAARAVLQNTS
Sbjct: 448 AIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTS 507

Query: 518 QINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVM 577
           QINQMLSDLNRVDFANVQEQASWVCQC++++VQRLE DFK+TLQQQS+L+QWA+WLD+V+
Sbjct: 508 QINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVV 567

Query: 578 MQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 637
            Q LK + G PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL
Sbjct: 568 TQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 627

Query: 638 VEHRVAQATGETPIAVMGEFGDLNAVSPGNLDKDEGSEVE--SEMDEELDDSSEPQAKRE 695
           VEHRVA+ATGETPIAVMGEF DL ++S   LDKD+  + +  SE   +     EP  KRE
Sbjct: 628 VEHRVAEATGETPIAVMGEFNDLASLSLTLLDKDDMGDEQRGSEAGPDARSLGEPLVKRE 687

Query: 696 KTE 698
           +++
Sbjct: 688 RSD 690


>gi|238859557 regulatory factor X1 [Homo sapiens]
          Length = 979

 Score =  791 bits (2042), Expect = 0.0
 Identities = 419/701 (59%), Positives = 507/701 (72%), Gaps = 76/701 (10%)

Query: 29  QVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQN 88
           Q +Q V V Q+VQQ+Q V  V HVY +QVQYVEG D  YT  AIR++TY Y ET +Y+Q 
Sbjct: 268 QGLQPVHVAQEVQQLQQVP-VPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQT 326

Query: 89  TGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVTGGQLISSS----------------- 131
              +Y++  G++ QV+T  +S ++  +G + M V+G Q+++SS                 
Sbjct: 327 ASTSYYEAAGTATQVSTPATSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSG 386

Query: 132 -----------------------GGTYLI--GNSMENSGHSVTHTTRASPATIEMAIETL 166
                                   GTY+I  G  + ++  S +HTTRASPAT+       
Sbjct: 387 GGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYSHTTRASPATV------- 439

Query: 167 QKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFG 226
                             QWLLDNYETAEGVSLPRSTLY HYL HCQE KL+PVNAASFG
Sbjct: 440 ------------------QWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFG 481

Query: 227 KLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYK 286
           KLIRS+FMGLRTRRLGTRGNSKYHYYG+R+K  SPL RL ED Q+MAMR QP  QKQR K
Sbjct: 482 KLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLK 541

Query: 287 PMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDG 344
           P+QK++G+ +G    GQQ  T +   + AQ Q +QQFLDASR+LP+F E+++    LP+G
Sbjct: 542 PIQKMEGMTNG-VAVGQQPSTGLSD-ISAQVQQYQQFLDASRSLPDFTELDLQGKVLPEG 599

Query: 345 TTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLS 404
               DIK+ Q LYREHCEAI+DV+VNLQF+L+E LW+TFWRY+ S P++   +       
Sbjct: 600 VGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHD--- 656

Query: 405 EIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAK 464
           E E RLPKA L+ L K E +L+W  +CD+ +YQ LVEILIPDVLRPIPSALTQAIRNFAK
Sbjct: 657 EAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAK 716

Query: 465 SLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLS 524
           SLE WL++AM NIP+ M++ KVAA  AFAQTLRRYTSLNHLAQAARAVLQNT+QINQMLS
Sbjct: 717 SLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLS 776

Query: 525 DLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPY 584
           DLNRVDFANVQEQASWVC+C+D +VQRLE DFK+TLQQQ++LEQWAAWLD V+ Q LKPY
Sbjct: 777 DLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPY 836

Query: 585 EGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQ 644
           +G   FPKAA+ FLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YL+EHRVAQ
Sbjct: 837 QGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQ 896

Query: 645 ATGETPIAVMGEFGDL-NAVSPGNLDKDEGSEVESEMDEEL 684
           A GETPIAVMGEF +L  +++P + DKDE  E E E ++EL
Sbjct: 897 AKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDEL 937



 Score = 38.9 bits (89), Expect = 0.018
 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 7/63 (11%)

Query: 1   MQTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQ--HVYPAQVQ 58
           M+ SET S+         S ASQ  VPTQVVQQV   QQ   VQT  Q +  HV P Q+ 
Sbjct: 110 MRASETVSEASPG-----STASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLT 164

Query: 59  YVE 61
            ++
Sbjct: 165 NIQ 167


>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
          Length = 563

 Score =  277 bits (708), Expect = 3e-74
 Identities = 166/462 (35%), Positives = 243/462 (52%), Gaps = 60/462 (12%)

Query: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
           LQWL +NYE AEGV +PRS LY HYL  C+++   PVNAASFGK+IR  F  L TRRLGT
Sbjct: 71  LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 130

Query: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
           RG SKYHYYGI VK  S                      Q Y  M    G A   + +G+
Sbjct: 131 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 167

Query: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
           +    V +  +A S   +        LPEF  V+  +LP     E + +   +YR HC+ 
Sbjct: 168 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 220

Query: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
           ILD V+   F  ++     FW+  P                          ++ +    +
Sbjct: 221 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 256

Query: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
           ++  +  CD  +Y+A+  +L+P VL+ +P +LTQ IR FAK L+ WL  A++++P+ +  
Sbjct: 257 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 316

Query: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
            K      F+Q LRR TSLNHL QA+R V+ +     QML D   VD  ++ +Q  +  +
Sbjct: 317 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 376

Query: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
              +    ++ +L  +F   L++QS +E +  WLD ++ + +     +   S  K A+QF
Sbjct: 377 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 436

Query: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
           LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 437 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 478


>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
          Length = 735

 Score =  277 bits (708), Expect = 3e-74
 Identities = 166/462 (35%), Positives = 243/462 (52%), Gaps = 60/462 (12%)

Query: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
           LQWL +NYE AEGV +PRS LY HYL  C+++   PVNAASFGK+IR  F  L TRRLGT
Sbjct: 62  LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 121

Query: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
           RG SKYHYYGI VK  S                      Q Y  M    G A   + +G+
Sbjct: 122 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 158

Query: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
           +    V +  +A S   +        LPEF  V+  +LP     E + +   +YR HC+ 
Sbjct: 159 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 211

Query: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
           ILD V+   F  ++     FW+  P                          ++ +    +
Sbjct: 212 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 247

Query: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
           ++  +  CD  +Y+A+  +L+P VL+ +P +LTQ IR FAK L+ WL  A++++P+ +  
Sbjct: 248 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 307

Query: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
            K      F+Q LRR TSLNHL QA+R V+ +     QML D   VD  ++ +Q  +  +
Sbjct: 308 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 367

Query: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
              +    ++ +L  +F   L++QS +E +  WLD ++ + +     +   S  K A+QF
Sbjct: 368 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 427

Query: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
           LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 428 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 469


>gi|27734871 regulatory factor X, 6 [Homo sapiens]
          Length = 928

 Score =  247 bits (631), Expect = 3e-65
 Identities = 158/468 (33%), Positives = 231/468 (49%), Gaps = 67/468 (14%)

Query: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
           LQWL +NY   EGV LPR  LY HYL  C++ KL+P  AA+FGK IR  F  L TRRLGT
Sbjct: 125 LQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGT 184

Query: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
           RG+SKYHYYGI +K  S                        Y  +    G+   F+GS  
Sbjct: 185 RGHSKYHYYGIGIKESSAY----------------------YHSVYSGKGLTR-FSGSKL 221

Query: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
           +      +     S+           LPEF   +        + + + +L  +Y+ HC+ 
Sbjct: 222 KNEGGFTRKYSLSSK-------TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQC 274

Query: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
           ILD  +N  F  I+     FW+  P                          L+ L ++  
Sbjct: 275 ILDNAINGNFEEIQHFLLHFWQGMPD------------------------HLLPLLENPV 310

Query: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
           I+   C CD  +Y+ L ++LIP  ++ +P +L   IRNFAK+ E W+ +++ N+P+ +  
Sbjct: 311 IIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTD 370

Query: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
            K+  V  F  +L+R TS  HLAQ AR  L +   +N M+SD+ RVD  ++  QA     
Sbjct: 371 KKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTIS 430

Query: 544 CDDNMVQRLET---------DFKMTLQQQSTLEQWAAWLDNVMMQAL---KPYEGRPSFP 591
              +    + T         + K  L++ +T+E +  WLD V+ Q +       GR S  
Sbjct: 431 GSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLK 489

Query: 592 KAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
           K A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+   +E
Sbjct: 490 KRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537


>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
          Length = 641

 Score =  192 bits (487), Expect = 1e-48
 Identities = 123/397 (30%), Positives = 194/397 (48%), Gaps = 60/397 (15%)

Query: 249 YHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTS 308
           YHYYGI VK  S                      Q Y  M    G A   + +G++    
Sbjct: 33  YHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGKK---E 66

Query: 309 VEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVV 368
           V +  +A S   +        LPEF  V+  +LP     E + +   +YR HC+ ILD V
Sbjct: 67  VSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTV 122

Query: 369 VNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHESILKWM 428
           +   F  ++     FW+  P                          ++ +    +++  +
Sbjct: 123 IRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSSTVVNIV 158

Query: 429 CNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAA 488
             CD  +Y+A+  +L+P VL+ +P +LTQ IR FAK L+ WL  A++++P+ +   K   
Sbjct: 159 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 218

Query: 489 VSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDN- 547
              F+Q LRR TSLNHL QA+R V+ +     QML D   VD  ++ +Q  +  +   + 
Sbjct: 219 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 278

Query: 548 ---MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQFLLKWS 602
              ++ +L  +F   L++QS +E +  WLD ++ + +     +   S  K A+QFLL WS
Sbjct: 279 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 338

Query: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
            + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 339 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 375


>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
          Length = 473

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 56/234 (23%), Positives = 112/234 (47%), Gaps = 9/234 (3%)

Query: 432 DHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSA 491
           D  +Y+ + ++L+ D L  +     ++++ F+K  + WL NA+  +P  +  +K+  V+ 
Sbjct: 112 DVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTL 171

Query: 492 FAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQR 551
           F + LRR T L+++A+  R VL++  +++ + SDL  +        +      D +    
Sbjct: 172 FVKRLRRKTYLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADE 231

Query: 552 LETDFKM--------TLQQQSTLEQWAAWLDNVMMQ-ALKPYEGRPSFPKAARQFLLKWS 602
           LE + +M         L   + L  + + L + +     +    +  F K A  F L+W+
Sbjct: 232 LENNPEMKCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWN 291

Query: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE 656
              + V + +TL    SFGS+HL  LL  EYM ++++  + +   E  +  + E
Sbjct: 292 LLLTAVSKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVKE 345


>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
          Length = 1460

 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 167 QKSD--GLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAAS 224
           +KSD   +S+ R+  +++   W+ +  E     SLP+  +Y+ Y  +C      P++AA 
Sbjct: 91  EKSDQNAMSSSRAQQMHA-FSWIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAAD 149

Query: 225 FGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVK 257
           FGK+++++F  ++ RRLGTRG SKY Y G+R K
Sbjct: 150 FGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKK 182


>gi|71040090 regulatory factor X, 5 [Homo sapiens]
          Length = 616

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 185 QWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKL-DPVNAASFGKLIRSIFMGLRTRRLGT 243
           +W+ ++ E      LP+ ++Y+ Y ++C+      P++ A+FGK+IR IF  ++ RRLG 
Sbjct: 94  RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153

Query: 244 RGNSKYHYYGIRVK 257
           RG SKY Y GIR K
Sbjct: 154 RGQSKYCYSGIRRK 167


>gi|4557843 regulatory factor X, 5 [Homo sapiens]
          Length = 616

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 185 QWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKL-DPVNAASFGKLIRSIFMGLRTRRLGT 243
           +W+ ++ E      LP+ ++Y+ Y ++C+      P++ A+FGK+IR IF  ++ RRLG 
Sbjct: 94  RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153

Query: 244 RGNSKYHYYGIRVK 257
           RG SKY Y GIR K
Sbjct: 154 RGQSKYCYSGIRRK 167


>gi|217272829 nuclear transcription factor Y, gamma isoform 3 [Homo
           sapiens]
          Length = 334

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 2   QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
           Q  +  S TG T+     V  Q    T  +QQ+PVQ    Q+Q ++  Q V   QV  V+
Sbjct: 211 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 264

Query: 62  GS-DTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQ 97
           G   T+ TN    T T      Q +SQ T G  +  Q
Sbjct: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDGQLYQIQ 301


>gi|217272833 nuclear transcription factor Y, gamma isoform 4 [Homo
           sapiens]
          Length = 297

 Score = 37.4 bits (85), Expect = 0.051
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 2   QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
           Q  +  S TG T+     V  Q    T  +QQ+PVQ    Q+Q ++  Q V   QV  V+
Sbjct: 173 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 226

Query: 62  GS-DTVYTNGAIRTTTYPYTETQMYSQNTGG 91
           G   T+ TN    T T      Q +SQ T G
Sbjct: 227 GQIQTLATNAQQITQTEVQQGQQQFSQFTDG 257


>gi|11496978 nuclear transcription factor Y, gamma isoform 2 [Homo
           sapiens]
          Length = 335

 Score = 37.4 bits (85), Expect = 0.051
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 2   QTSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE 61
           Q  +  S TG T+     V  Q    T  +QQ+PVQ    Q+Q ++  Q V   QV  V+
Sbjct: 211 QAQQAQSGTGQTM----QVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQ 264

Query: 62  GS-DTVYTNGAIRTTTYPYTETQMYSQNTGG 91
           G   T+ TN    T T      Q +SQ T G
Sbjct: 265 GQIQTLATNAQQITQTEVQQGQQQFSQFTDG 295


>gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens]
          Length = 1023

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 12/147 (8%)

Query: 3   TSETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEG 62
           T++  +  G    +Q    SQ+A   Q  Q +  Q QV QV +V   Q + P+  Q  +G
Sbjct: 821 TTDYRTPQGDYQRIQYIPVSQSASGLQQPQHI--QLQVVQVASVSG-QPLSPSAQQAQQG 877

Query: 63  SDTVYTNGAIRTTTYPYTETQMYSQNTG---------GNYFDTQGSSAQVTTVVSSHSMV 113
               +  G+  T      + Q   QN+           N F    S  Q+ T+     ++
Sbjct: 878 LSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQMMTLPPGQFVI 937

Query: 114 GTGGIQMGVTGGQLISSSGGTYLIGNS 140
              G+   VT GQ+ + + G Y++  S
Sbjct: 938 TDSGVATPVTTGQVKAVTSGHYVLSES 964


>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
           sapiens]
          Length = 1835

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 20/141 (14%)

Query: 185 QWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPV-NAASFGKLIRSIFMGLRTRRL-G 242
           QWL  ++E     S+ R+ +Y+ YL  C +     +  +  F K +R++F     +R+  
Sbjct: 526 QWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVED 585

Query: 243 TRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVAD------ 296
           +  N + H + + VK  +    +Q     M  +QQP+        + +VD V D      
Sbjct: 586 SSSNGQAHIHVVGVKRRAIPLPIQ-----MYYQQQPVSTS-----VVRVDSVPDVSPAPS 635

Query: 297 --GFTGSGQQTGTSVEQTVIA 315
             G     Q  G   ++T +A
Sbjct: 636 PAGIPHGSQTIGNHFQRTPVA 656



 Score = 31.2 bits (69), Expect = 3.7
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 9/140 (6%)

Query: 1   MQTSETGSDTGSTVTLQTSVASQAAVPTQ------VVQQVPVQQQVQQVQTVQQVQHVYP 54
           +Q   TG    + V  QT +   + +P Q      V  Q+P    V  +Q      H++ 
Sbjct: 744 VQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMF- 802

Query: 55  AQVQYVEGSDTVYTNGAIRTTTYPY-TETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMV 113
            +VQ +    +  + G    TT P   +T     + G    DT   +       S+ ++V
Sbjct: 803 GRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYVTTSASNIV 862

Query: 114 GTGGIQ-MGVTGGQLISSSG 132
               +Q   V  GQ+++ +G
Sbjct: 863 SATSVQNFQVATGQMVTIAG 882


>gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens]
          Length = 1061

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 20/157 (12%)

Query: 4    SETGSDTGSTVTLQTSVASQAAVPTQVVQQV----------PVQQQVQQVQTVQ-QVQHV 52
            S +G      + LQ    + A  P Q  Q            P  Q   QVQ +Q   Q +
Sbjct: 846  SASGLQQPQHIQLQVVQVASATSPHQSQQSTVDVGQLHDPQPYPQHAIQVQHIQVSGQPL 905

Query: 53   YPAQVQYVEGSDTVYTNGAIRTTTYPYTETQMYSQNTG---------GNYFDTQGSSAQV 103
             P+  Q  +G    +  G+  T      + Q   QN+           N F    S  Q+
Sbjct: 906  SPSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQM 965

Query: 104  TTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIGNS 140
             T+     ++   G+   VT GQ+ + + G Y++  S
Sbjct: 966  MTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLSES 1002


>gi|161016767 mucin 21 [Homo sapiens]
          Length = 566

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 4/193 (2%)

Query: 4   SETGSDTGSTVTLQTSVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGS 63
           S T S   ST T   S    +   T    +           T  +   V  + +  V  S
Sbjct: 230 SSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTV-SSGISTVTNS 288

Query: 64  DTVYTNGAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVT 123
           ++   +    T T   + T     NT  N  D+  +S+  +T  +S S   + G      
Sbjct: 289 ESSTPSSGANTATNSESSTTSSGANTATNS-DSSTTSSGASTATNSESSTTSSGASTATN 347

Query: 124 GGQLISSSGGTYLI--GNSMENSGHSVTHTTRASPATIEMAIETLQKSDGLSTHRSSLLN 181
                +SSG +     G+S  +SG S    + +S  +   +  T  +S   S+  S+  N
Sbjct: 348 SESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATN 407

Query: 182 SHLQWLLDNYETA 194
           S    +     TA
Sbjct: 408 SESSTVSSGASTA 420


>gi|217272835 nuclear transcription factor Y, gamma isoform 5 [Homo
           sapiens]
          Length = 301

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 20  VASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGS-DTVYTNGAIRTTTYP 78
           V  Q    T  +QQ+PVQ    Q+Q ++  Q V   QV  V+G   T+ TN    T T  
Sbjct: 191 VMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQV--VQGQIQTLATNAQQITQTEV 248

Query: 79  YTETQMYSQNTGG 91
               Q +SQ T G
Sbjct: 249 QQGQQQFSQFTDG 261


>gi|54792088 hypothetical protein LOC23506 [Homo sapiens]
          Length = 1079

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 14/129 (10%)

Query: 3   TSETGSDTGSTVTLQTSVA------SQAAVPTQVVQQVPVQQQVQQVQTVQ-QVQHVYPA 55
           TS+  S TG ++ + + +       SQ  +PT +         V  VQT+  Q+    P+
Sbjct: 374 TSQAVSSTGGSIVIHSPMGQPHAPQSQFLIPTSLSVS---SNSVHHVQTINGQLLQTQPS 430

Query: 56  Q-VQYVEGSDTVYTN---GAIRTTTYPYTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHS 111
           Q +     S+ V  N     +  T  PYT   + +QNT  +    Q  +A  + V+++H+
Sbjct: 431 QLISGQVASEHVMLNRNSSNMLRTNQPYTGPMLNNQNTAVHLVSGQTFAASGSPVIANHA 490

Query: 112 MVGTGGIQM 120
                G QM
Sbjct: 491 SPQLVGGQM 499


>gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]
          Length = 1156

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 12/122 (9%)

Query: 19   SVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYP 78
            S  S A V  Q +   P  QQ QQ  +   +Q     Q Q ++       N +++ T  P
Sbjct: 988  SAPSSAQVSGQPLS--PSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLP 1045

Query: 79   YTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIG 138
                      +  N F    S  Q+ T+     ++   G+   VT GQ+ + + G Y++ 
Sbjct: 1046 ----------SAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLS 1095

Query: 139  NS 140
             S
Sbjct: 1096 ES 1097


>gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]
          Length = 1160

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 12/122 (9%)

Query: 19   SVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGAIRTTTYP 78
            S  S A V  Q +   P  QQ QQ  +   +Q     Q Q ++       N +++ T  P
Sbjct: 992  SAPSSAQVSGQPLS--PSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLP 1049

Query: 79   YTETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGIQMGVTGGQLISSSGGTYLIG 138
                      +  N F    S  Q+ T+     ++   G+   VT GQ+ + + G Y++ 
Sbjct: 1050 ----------SAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLS 1099

Query: 139  NS 140
             S
Sbjct: 1100 ES 1101


>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
          Length = 796

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)

Query: 19  SVASQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGS 63
           + A+ AA      QQ   QQQ QQ Q  QQ Q     Q+ +V+GS
Sbjct: 90  AAAAAAAAAAAAAQQQQQQQQQQQQQQQQQQQQQQQQQLNHVDGS 134


>gi|119703744 desmoglein 1 preproprotein [Homo sapiens]
          Length = 1049

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)

Query: 98   GSSAQVTTVVSSHSMVGTGGIQMGVTGGQL-ISSSGGTYLIGNSMENSGHSVTHTT-RAS 155
            GSS  V T + + S   +G    G++GG + +SS GGT  IG+   +S H    T   AS
Sbjct: 975  GSSGLVGTSMGAGSGALSGA---GISGGGIGLSSLGGTASIGHMRSSSDHHFNQTIGSAS 1031

Query: 156  PATIEMAI 163
            P+T    I
Sbjct: 1032 PSTARSRI 1039


>gi|45007002 longevity assurance homolog 6 [Homo sapiens]
          Length = 384

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 662 AVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKT 697
           AVS G + KD+ S++ES  DEE    SEP  K   T
Sbjct: 329 AVSRGKVSKDDRSDIESSSDEE---DSEPPGKNPHT 361


>gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]
          Length = 590

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 638 VEHRVAQATGETPIAVMGEFGDLNAVSPGNLDKDEGSEVESEMDEELDD--SSEPQAKRE 695
           + +   Q  GE         G L    P    +D+GS+    +D E  D  S  P A   
Sbjct: 255 ISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIP 314

Query: 696 KTELSQAFPVGCMQPVLETGVQPSLLNPIHSEH 728
           K +L++  P G   P  +  ++P  L    SEH
Sbjct: 315 KLKLTRPVPAGADLPPPKIRLKPHRLG--DSEH 345


>gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]
          Length = 499

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 638 VEHRVAQATGETPIAVMGEFGDLNAVSPGNLDKDEGSEVESEMDEELDD--SSEPQAKRE 695
           + +   Q  GE         G L    P    +D+GS+    +D E  D  S  P A   
Sbjct: 255 ISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIP 314

Query: 696 KTELSQAFPVGCMQPVLETGVQPSLLNPIHSEH 728
           K +L++  P G   P  +  ++P  L    SEH
Sbjct: 315 KLKLTRPVPAGADLPPPKIRLKPHRLG--DSEH 345


>gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]
          Length = 598

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 46/170 (27%), Positives = 62/170 (36%), Gaps = 33/170 (19%)

Query: 6   TGSDTGST-VTLQTSVA-----SQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQY 59
           TGS TG+T V L T+VA     ++A   T V +   V Q+                    
Sbjct: 47  TGSKTGTTGVALSTTVAPGSSSTEATTSTGVHRTTVVGQKTGAT---------------- 90

Query: 60  VEGSDTVYTNGAIR-TTTYPYTETQMYSQNTG------GNYFDTQGSSAQVTTVVSSH-- 110
             GS    T   I  TT++  T T     NTG      GN       + + T+  S    
Sbjct: 91  TRGSAKQGTRSTIEATTSFRGTGTTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERPN 150

Query: 111 --SMVGTGGIQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRASPAT 158
             S +GT GI  G T     S++  T  +GN       S   TT  +  T
Sbjct: 151 PGSEIGTTGIVSGTTVAPGSSNTEATTSLGNGGTTEAGSKIVTTGITTGT 200


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.128    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,392,787
Number of Sequences: 37866
Number of extensions: 1111371
Number of successful extensions: 5162
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 4991
Number of HSP's gapped (non-prelim): 163
length of query: 749
length of database: 18,247,518
effective HSP length: 110
effective length of query: 639
effective length of database: 14,082,258
effective search space: 8998562862
effective search space used: 8998562862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.