Guide to the Human Genome
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Name: SPOCK2 Sequence: fasta or formatted (77aa) NCBI GI: 197313714
Description:

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 isoform 1

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt prot [424aa] sparc/osteonectin, cwcv and kazal-like domains proteoglycan (test...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4          8           4
 C cysteine            1.3          1           1
 D aspartate           5.2          4           1
 E glutamate           6.5          5           1
 F phenylalanine       2.6          2           1
 G glycine             9.1          7           1
 H histidine           1.3          1           1
 I isoleucine          2.6          2           1
 K lysine              5.2          4           1
 L leucine            11.7          9           4
 M methionine          2.6          2           1
 N asparagine          2.6          2           1
 P proline             9.1          7           2
 Q glutamine           3.9          3           1
 R arginine            5.2          4           1
 S serine              9.1          7           2
 T threonine           5.2          4           2
 V valine              2.6          2           1
 W tryptophan          2.6          2           1
 Y tyrosine            1.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sparc/osteonectin, cwcv and kazal-like domains prot... 
SPOCK2                0.794   sparc/osteonectin, cwcv and kazal-like domains proteo...
SPOCK3                0.191   testican 3 isoform 2 
SPOCK3                0.184   testican 3 isoform 1 
SPOCK1                0.154   sparc/osteonectin, cwcv and kazal-like domains proteo...
SETD1A                0.029   SET domain containing 1A 
SMCR7                 0.015   Smith-Magenis syndrome chromosome region, candidate...
SPTBN4                0.015   spectrin, beta, non-erythrocytic 4 isoform sigma5 [...
SPTBN4                0.015   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
TMEM145               0.015   transmembrane protein 145 
PADI3                 0.007   peptidyl arginine deiminase, type III 
NRXN2                 0.007   neurexin 2 isoform alpha-1 precursor 
NRXN2                 0.007   neurexin 2 isoform alpha-2 precursor 
PCDHA12               0.007   protocadherin alpha 12 isoform 2 precursor 
PCDHA12               0.007   protocadherin alpha 12 isoform 1 precursor 
LGI2                  0.007   leucine-rich repeat LGI family, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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