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Search of human proteins with 195963429
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|195963429 RAB, member of RAS oncogene family-like 2B isoform
3 [Homo sapiens]
(238 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|195963429 RAB, member of RAS oncogene family-like 2B isoform ... 479 e-136
gi|195963427 RAB, member of RAS oncogene family-like 2B isoform ... 452 e-127
gi|5902040 RAB, member of RAS oncogene family-like 2B isoform 2 ... 452 e-127
gi|7549817 RAB, member of RAS oncogene family-like 2A [Homo sapi... 449 e-126
gi|5902038 RAB, member of RAS oncogene family-like 2A [Homo sapi... 449 e-126
gi|51317349 RAB, member of RAS oncogene family-like 2B isoform 1... 447 e-126
gi|195963425 RAB, member of RAS oncogene family-like 2B isoform ... 447 e-126
gi|195963423 RAB, member of RAS oncogene family-like 2B isoform ... 447 e-126
gi|195963421 RAB, member of RAS oncogene family-like 2B isoform ... 447 e-126
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 102 3e-22
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 102 3e-22
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 102 4e-22
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 101 5e-22
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 98 5e-21
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 98 7e-21
gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens] 96 4e-20
gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens] 95 5e-20
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 95 5e-20
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 95 6e-20
gi|5453555 ras-related nuclear protein [Homo sapiens] 94 8e-20
gi|34147513 RAB7, member RAS oncogene family [Homo sapiens] 94 1e-19
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 92 5e-19
gi|19923483 GTPase Rab14 [Homo sapiens] 91 7e-19
gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens] 91 7e-19
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 91 9e-19
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 91 1e-18
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 90 1e-18
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 90 2e-18
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 90 2e-18
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 87 1e-17
>gi|195963429 RAB, member of RAS oncogene family-like 2B isoform 3
[Homo sapiens]
Length = 238
Score = 479 bits (1234), Expect = e-136
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF 180
EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF 180
Query: 181 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
Sbjct: 181 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
>gi|195963427 RAB, member of RAS oncogene family-like 2B isoform 2
[Homo sapiens]
Length = 228
Score = 452 bits (1163), Expect = e-127
Identities = 228/238 (95%), Positives = 228/238 (95%), Gaps = 10/238 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF 180
EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV KLF
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KLF 170
Query: 181 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
Sbjct: 171 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 228
>gi|5902040 RAB, member of RAS oncogene family-like 2B isoform 2
[Homo sapiens]
Length = 228
Score = 452 bits (1163), Expect = e-127
Identities = 228/238 (95%), Positives = 228/238 (95%), Gaps = 10/238 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF 180
EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV KLF
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KLF 170
Query: 181 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
Sbjct: 171 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 228
>gi|7549817 RAB, member of RAS oncogene family-like 2A [Homo
sapiens]
Length = 228
Score = 449 bits (1155), Expect = e-126
Identities = 225/238 (94%), Positives = 227/238 (95%), Gaps = 10/238 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF 180
EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV KLF
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KLF 170
Query: 181 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 171 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
>gi|5902038 RAB, member of RAS oncogene family-like 2A [Homo
sapiens]
Length = 228
Score = 449 bits (1155), Expect = e-126
Identities = 225/238 (94%), Positives = 227/238 (95%), Gaps = 10/238 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDG+TILVDFWDTAGQERFQSMHASYYHKAHACIMVFD+QRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLF 180
EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV KLF
Sbjct: 121 EFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KLF 170
Query: 181 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEE ASPHS
Sbjct: 171 NDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS 228
>gi|51317349 RAB, member of RAS oncogene family-like 2B isoform 1
[Homo sapiens]
Length = 229
Score = 447 bits (1151), Expect = e-126
Identities = 228/239 (95%), Positives = 228/239 (95%), Gaps = 11/239 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL 179
EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVV KL
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KL 170
Query: 180 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
Sbjct: 171 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229
>gi|195963425 RAB, member of RAS oncogene family-like 2B isoform 1
[Homo sapiens]
Length = 229
Score = 447 bits (1151), Expect = e-126
Identities = 228/239 (95%), Positives = 228/239 (95%), Gaps = 11/239 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL 179
EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVV KL
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KL 170
Query: 180 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
Sbjct: 171 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229
>gi|195963423 RAB, member of RAS oncogene family-like 2B isoform 1
[Homo sapiens]
Length = 229
Score = 447 bits (1151), Expect = e-126
Identities = 228/239 (95%), Positives = 228/239 (95%), Gaps = 11/239 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL 179
EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVV KL
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KL 170
Query: 180 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
Sbjct: 171 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229
>gi|195963421 RAB, member of RAS oncogene family-like 2B isoform 1
[Homo sapiens]
Length = 229
Score = 447 bits (1151), Expect = e-126
Identities = 228/239 (95%), Positives = 228/239 (95%), Gaps = 11/239 (4%)
Query: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
Sbjct: 1 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK 60
Query: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
Sbjct: 61 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR 120
Query: 121 EFRPEIPCIVVANKID-DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKL 179
EFRPEIPCIVVANKID DINVTQKSFNFAKKFSLPLYFVSAADGTNVV KL
Sbjct: 121 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVV----------KL 170
Query: 180 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 238
FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
Sbjct: 171 FNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS 229
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 102 bits (254), Expect = 3e-22
Identities = 63/177 (35%), Positives = 94/177 (53%), Gaps = 12/177 (6%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ +GDS VGKS L+ RF + F + ST + + VDG+TI WDTAGQER
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFR-PEIPCIVVANKIDDINV- 140
++++ ++YY A ++V+D+ + +TY N+ W ELR+ I ++V NK D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132
Query: 141 ---TQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLFNDAIRLAVSYKQNS 194
T ++ FA+K L SA D TNV E A + I VS KQ S
Sbjct: 133 AVPTDEARAFAEKNGLSFIETSALDSTNV-------EAAFQTILTEIYRIVSQKQMS 182
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 102 bits (254), Expect = 3e-22
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ +GDS VGKS L+ RF D + +ST + T +DG+TI + WDTAGQER
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPE-IPCIVVANKIDDI--- 138
F+++ +SYY AH I+V+DV + +Y N+ W E+ + E + ++V NK D
Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKK 129
Query: 139 ---NVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWLT--AEVASKL 179
N T K FA +P SA + TNV + ++T AE+ ++
Sbjct: 130 VVDNTTAK--EFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 102 bits (253), Expect = 4e-22
Identities = 55/149 (36%), Positives = 86/149 (57%), Gaps = 5/149 (3%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ +GDS VGKS L+ RF + F + ST + + VDG+TI WDTAGQER
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFR-PEIPCIVVANKIDDINV- 140
++++ ++YY A ++V+D+ + +TY N+ W ELR+ I ++V NK D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 132
Query: 141 ---TQKSFNFAKKFSLPLYFVSAADGTNV 166
T ++ FA+K +L SA D TNV
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNV 161
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 101 bits (252), Expect = 5e-22
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ +GDS VGKS L+ RF D + +ST + T +DG+TI + WDTAGQER
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPE-IPCIVVANKIDDINVT 141
F+++ +SYY AH I+V+DV + ++ N+ W E+ + E + ++V NK D
Sbjct: 73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK 132
Query: 142 QKSFNFAKKFS----LPLYFVSAADGTNVVKVWLT--AEVASKL 179
+ AK+F+ +P SA + TNV + ++T AE+ ++
Sbjct: 133 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 176
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 98.2 bits (243), Expect = 5e-21
Identities = 50/158 (31%), Positives = 88/158 (55%), Gaps = 4/158 (2%)
Query: 17 DADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWD 76
D D K++ +GDS VGKS L+ RF + F ++T + T ++G + + WD
Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
Query: 77 TAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPEIPCIVVANKID 136
TAGQERF+++ ++YY H I+V+DV ++ N+ W E+ + ++ I+V NK D
Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKND 123
Query: 137 D----INVTQKSFNFAKKFSLPLYFVSAADGTNVVKVW 170
D + T+ ++ FA + + L+ SA + NV +++
Sbjct: 124 DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 97.8 bits (242), Expect = 7e-21
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 17 DADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWD 76
D +KI+ +G+S VGKS L+ RF D F P+ +T + T +VDG + WD
Sbjct: 4 DVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWD 63
Query: 77 TAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREF--RPEIPCIVVANK 134
TAGQERF+++ SYY A I+V+DV R+ T+ L W EL + R +I ++V NK
Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNK 123
Query: 135 IDDIN---VTQKSFNFAKKFSLPLYFVSA 160
ID N + FA+K S+ SA
Sbjct: 124 IDKENREVDRNEGLKFARKHSMLFIEASA 152
>gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 95.5 bits (236), Expect = 4e-20
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K+I LGD VGKS LM R++ + F Q T + VDG + + WDTAGQER
Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTW------YTELREFRPE-IPCIVVANKI 135
F+S+ +Y + C++ F V +++NLS W Y +++E PE P +++ NKI
Sbjct: 69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKE--PESFPFVILGNKI 126
Query: 136 DDINVTQKSFNFAKKF-----SLPLYFVSAADGTNVVKVWLTAEVASKLFNDAIRLAVSY 190
DI+ Q S A+ + P + SA D TNV + F +A+R ++
Sbjct: 127 -DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNV----------AAAFEEAVRRVLAT 175
Query: 191 KQNS 194
+ S
Sbjct: 176 EDRS 179
>gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 95.1 bits (235), Expect = 5e-20
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 22 VKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQE 81
+K+I LGD VGKS LM R++ + F Q T + VDGR + + WDTAGQE
Sbjct: 8 LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67
Query: 82 RFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFR----PE-IPCIVVANKID 136
RF+S+ +Y A C++ F V + ++ NL W E + PE P +V+ NK+D
Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVD 127
Query: 137 --DINVTQKSFN--FAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLFNDAIRLAVSYKQ 192
D VT + + P SA D TNV + F +A+R ++ ++
Sbjct: 128 KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNV----------TVAFEEAVRQVLAVEE 177
Query: 193 NSQDFM 198
+ M
Sbjct: 178 QLEHCM 183
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 95.1 bits (235), Expect = 5e-20
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQ-LSTYALTLYKHTATVDGRTILVDFWDTAGQE 81
K++ +GDS VGK+ L+ RF F +ST + VDG + + WDTAGQE
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 124
Query: 82 RFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREF-RPEIPCIVVANKIDD--- 137
RF+S+ +YY AHA ++++DV K ++ N+ W TE+ E+ + ++ +++ NK+D
Sbjct: 125 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHE 184
Query: 138 -INVTQKSFNFAKKFSLPLYFVSAADGTNV 166
+ + AK++ LP SA G NV
Sbjct: 185 RVVKREDGEKLAKEYGLPFMETSAKTGLNV 214
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 94.7 bits (234), Expect = 6e-20
Identities = 57/172 (33%), Positives = 99/172 (57%), Gaps = 7/172 (4%)
Query: 17 DADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWD 76
D D KI+ +G++ VGK+ L+ RF F P Q +T + T ++G + + WD
Sbjct: 5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 64
Query: 77 TAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRP-EIPCIVVANKI 135
TAGQERF+S+ SYY A+A I+ +D+ + ++R L W E+ ++ ++ ++V NKI
Sbjct: 65 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124
Query: 136 DDINVTQKSFNFAKKFS--LPLYFV--SAADGTNVVKVWLTAEVASKLFNDA 183
D + S A++FS +Y++ SA + NV K++L ++A +L ++A
Sbjct: 125 DLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFL--DLACRLISEA 174
>gi|5453555 ras-related nuclear protein [Homo sapiens]
Length = 216
Score = 94.4 bits (233), Expect = 8e-20
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ +GD GK+ ++R L F+ + ++T + ++ + I + WDTAGQE+
Sbjct: 12 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 71
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPEIPCIVVANKID--DINV 140
F + YY +A I++FDV +VTY+N+ W+ +L IP ++ NK+D D V
Sbjct: 72 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKV 131
Query: 141 TQKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLFND 182
KS F +K +L Y +SA N K +L +A KL D
Sbjct: 132 KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLW--LARKLIGD 171
>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 93.6 bits (231), Expect = 1e-19
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 22 VKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQE 81
+K+I LGDS VGK+ LM +++ F Q +T VD R + + WDTAGQE
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
Query: 82 RFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTE-LREFRP----EIPCIVVANKID 136
RFQS+ ++Y A C++VFDV T++ L +W E L + P P +V+ NKID
Sbjct: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128
Query: 137 DIN---VTQKSFNFA-KKFSLPLYFVSAADGTNVVKVWLT 172
N T+++ + K ++P + SA + NV + + T
Sbjct: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQT 168
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 91.7 bits (226), Expect = 5e-19
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ LG+SAVGKS L+ RF+ F Q ST + +D T+ + WDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
+ S+ YY A A I+V+D+ + T+ TW EL R+ P I + NK D N
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKVWLTAEVASKL 179
+ A+ + SL SA NV ++L +A KL
Sbjct: 142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLA--IAKKL 181
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 91.3 bits (225), Expect = 7e-19
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K I +GD VGKS L+ +F F T + V G+ I + WDTAGQER
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREF-RPEIPCIVVANKID---DI 138
F+++ SYY A +MV+D+ R+ TY +LS+W T+ R P I++ NK D
Sbjct: 73 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQR 132
Query: 139 NVT-QKSFNFAKKFSLPLYFVSAADGTNVVKVWLTAEVASKLFND 182
+VT +++ FA++ L SA G NV +L E A K++ +
Sbjct: 133 DVTYEEAKQFAEENGLLFLEASAKTGENVEDAFL--EAAKKIYQN 175
>gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]
Length = 229
Score = 91.3 bits (225), Expect = 7e-19
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
KII +GDS VGK+ L RF F + +T + + +DG I + WDTAGQER
Sbjct: 35 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQER 94
Query: 83 F-QSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELRE--FRPEIPCIVVANKIDDIN 139
F +SM YY HA + V+D+ ++ +L +W E ++ +IP I+V NK D +
Sbjct: 95 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRS 154
Query: 140 VTQKSFNFAKKF----SLPLYFVSAA---DGTNVVKVWLT 172
Q + A+KF S+PL+ SA D +V +++T
Sbjct: 155 AIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMT 194
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 90.9 bits (224), Expect = 9e-19
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 17 DADDNV--KIICLGDSAVGKSKLMERFLMDGFQPQQLS-TYALTLYKHTATVDGRTILVD 73
D +D+V K I +GDS VGK+ L+ +F F P S T + TVDG + +
Sbjct: 16 DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75
Query: 74 FWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREF-RPEIPCIVVA 132
WDTAGQERF+S+ +YY A A ++++D+ K ++ N+ W TE+ E+ + ++ +++
Sbjct: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
Query: 133 NKID----DINVTQKSFNFAKKFSLPLYFVSAADGTNVVKVWL 171
NK D + ++ A+++ +P SA G NV +L
Sbjct: 136 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFL 178
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 90.5 bits (223), Expect = 1e-18
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 23/210 (10%)
Query: 18 ADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDT 77
AD +++I +G VGK+ LMERF D F ST + T + G+ I + WDT
Sbjct: 39 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDT 98
Query: 78 AGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPE-IPCIVVANKID 136
AGQERF S+ ++YY A I+V+D+ +K T+ +L W + ++ E ++V NK+D
Sbjct: 99 AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLD 158
Query: 137 ---DINVT-QKSFNFAKKFS-LPLYFVSAADGTNVVKVWLTAEVASKLFNDAIRLAVSYK 191
D +T Q+ FA++ + + SA D NV +++L KL +D ++
Sbjct: 159 CETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFL------KLVDDILKKMP--- 209
Query: 192 QNSQDFMDEIFQELEN--FSLEQEEEDVPD 219
+D + EL N SL+ E E P+
Sbjct: 210 ------LDILRNELSNSILSLQPEPEIPPE 233
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 90.1 bits (222), Expect = 1e-18
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ LG+SAVGKS L+ RF+ F Q ST T +D T+ + WDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 81
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
+ S+ YY A A I+V+D+ + ++ W EL R+ P I + NK D N
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKR 141
Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKVWLTAEVASKL 179
F A+ + SL SA NV ++++ +A KL
Sbjct: 142 AVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMA--IAKKL 181
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 89.7 bits (221), Expect = 2e-18
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ LG+SAVGKS L+ RF+ F Q ST T +D T+ + WDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
+ S+ YY A A I+V+D+ T+ W EL R+ P I + NK D +
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 142
Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKVWLTAEVASKL 179
F A+ + SL SA NV ++++ +A KL
Sbjct: 143 AVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMA--IAKKL 182
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 89.7 bits (221), Expect = 2e-18
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K++ LG+SAVGKS L+ RF+ F Q ST T +D T+ + WDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTEL-REFRPEIPCIVVANKIDDINVT 141
+ S+ YY A A I+V+D+ T+ W EL R+ P I + NK D +
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKR 142
Query: 142 QKSFNFAKKF----SLPLYFVSAADGTNVVKVWLTAEVASKL 179
F A+ + SL SA NV ++++ +A KL
Sbjct: 143 AVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMA--IAKKL 182
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 87.4 bits (215), Expect = 1e-17
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQER 82
K + +G + GKS L+ +F+ + F+ T + V G+T+ + WDTAGQER
Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69
Query: 83 FQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREF-RPEIPCIVVANKID---DI 138
F+S+ SYY A ++V+D+ + TY +L+ W T+ R P I I+ NK D +
Sbjct: 70 FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 129
Query: 139 NVT-QKSFNFAKKFSLPLYFVSAADGTNVVKVWL 171
VT ++ FA++ L SA G NV + +L
Sbjct: 130 EVTFLEASRFAQENELMFLETSALTGENVEEAFL 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,303,767
Number of Sequences: 37866
Number of extensions: 325470
Number of successful extensions: 2244
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1896
Number of HSP's gapped (non-prelim): 278
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.