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Search of human proteins with 195927006
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|195927006 programmed cell death 8 isoform 5 [Homo sapiens]
(324 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|195927006 programmed cell death 8 isoform 5 [Homo sapiens] 641 0.0
gi|4757732 programmed cell death 8 isoform 1 [Homo sapiens] 637 0.0
gi|22202629 programmed cell death 8 isoform 2 [Homo sapiens] 561 e-160
gi|226437568 apoptosis-inducing factor, mitochondrion-associated... 78 9e-15
gi|65787454 apoptosis-inducing factor, mitochondrion-associated,... 78 9e-15
gi|21389617 apoptosis-inducing factor, mitochondrion-associated,... 78 9e-15
gi|22202631 programmed cell death 8 isoform 3 [Homo sapiens] 74 1e-13
gi|117168279 ovary-specific acidic protein [Homo sapiens] 45 7e-05
gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain... 37 0.018
gi|14318424 apoptosis-inducing factor (AIF)-like mitchondrion-as... 36 0.041
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 33 0.45
gi|50301238 glutathione reductase [Homo sapiens] 32 0.77
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 32 1.0
gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo ... 30 2.9
gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo ... 30 3.8
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 30 3.8
gi|34147522 chaperone, ABC1 activity of bc1 complex like precurs... 29 5.0
gi|56549696 E1A binding protein p400 [Homo sapiens] 29 6.5
gi|221139926 NHS-like 1 [Homo sapiens] 28 8.5
gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens] 28 8.5
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 28 8.5
>gi|195927006 programmed cell death 8 isoform 5 [Homo sapiens]
Length = 324
Score = 641 bits (1654), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
Query: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG
Sbjct: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
Query: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW
Sbjct: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
Query: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD
Sbjct: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
Query: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV
Sbjct: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
Query: 301 KSITIIGGGFLGSELACALGRKDI 324
KSITIIGGGFLGSELACALGRKDI
Sbjct: 301 KSITIIGGGFLGSELACALGRKDI 324
>gi|4757732 programmed cell death 8 isoform 1 [Homo sapiens]
Length = 613
Score = 637 bits (1644), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
Query: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG
Sbjct: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
Query: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW
Sbjct: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
Query: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD
Sbjct: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
Query: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV
Sbjct: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
Query: 301 KSITIIGGGFLGSELACALGRK 322
KSITIIGGGFLGSELACALGRK
Sbjct: 301 KSITIIGGGFLGSELACALGRK 322
>gi|22202629 programmed cell death 8 isoform 2 [Homo sapiens]
Length = 609
Score = 561 bits (1447), Expect = e-160
Identities = 293/323 (90%), Positives = 299/323 (92%), Gaps = 6/323 (1%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP + Q H+ +R +AS+GAS
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP--VVQSHHLG---SPSRSLASTGAS 55
Query: 61 GGKIDNSVLVLIVGLSTVGAGAY-AYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASE 119
G N V LIVG + GAG Y AYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASE
Sbjct: 56 GKDGSNLVYFLIVGATVTGAGVYYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASE 115
Query: 120 GEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL 179
GEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL
Sbjct: 116 GEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL 175
Query: 180 WFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVR 239
WFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVR
Sbjct: 176 WFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVR 235
Query: 240 DNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE 299
DNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE
Sbjct: 236 DNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE 295
Query: 300 VKSITIIGGGFLGSELACALGRK 322
VKSITIIGGGFLGSELACALGRK
Sbjct: 296 VKSITIIGGGFLGSELACALGRK 318
>gi|226437568 apoptosis-inducing factor, mitochondrion-associated, 3
isoform 3 [Homo sapiens]
Length = 604
Score = 78.2 bits (191), Expect = 9e-15
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 37/240 (15%)
Query: 83 YAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ ++ E EK Y R S L +++ K A S P S L++G G A
Sbjct: 158 HKFQVKIEKEKVY-VRASKQALQLQRRTKVMAKCIS-----PSAGYSSSTNVLIVGAGAA 211
Query: 143 AFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERS 202
A ++R R+++ + D LPY RP LSK L + +
Sbjct: 212 GLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSL-----------------DTQPEQ 254
Query: 203 IYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG 262
+ +P F+ + G+ VLT +VV +DVR V DG ++ Y K L+A G
Sbjct: 255 LALRPKEFFRAY---------GIEVLTEAQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGS 305
Query: 263 TPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRK 322
+P++LS G EV++ T+ R D + +++R +++ ++G GFLG E+A L K
Sbjct: 306 SPKTLSC---KGKEVENVFTI-RTPEDANRVVRLARG-RNVVVVGAGFLGMEVAAYLTEK 360
>gi|65787454 apoptosis-inducing factor, mitochondrion-associated, 3
isoform 2 [Homo sapiens]
Length = 598
Score = 78.2 bits (191), Expect = 9e-15
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 37/240 (15%)
Query: 83 YAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ ++ E EK Y R S L +++ K A S P S L++G G A
Sbjct: 152 HKFQVKIEKEKVY-VRASKQALQLQRRTKVMAKCIS-----PSAGYSSSTNVLIVGAGAA 205
Query: 143 AFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERS 202
A ++R R+++ + D LPY RP LSK L + +
Sbjct: 206 GLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSL-----------------DTQPEQ 248
Query: 203 IYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG 262
+ +P F+ + G+ VLT +VV +DVR V DG ++ Y K L+A G
Sbjct: 249 LALRPKEFFRAY---------GIEVLTEAQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGS 299
Query: 263 TPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRK 322
+P++LS G EV++ T+ R D + +++R +++ ++G GFLG E+A L K
Sbjct: 300 SPKTLSC---KGKEVENVFTI-RTPEDANRVVRLARG-RNVVVVGAGFLGMEVAAYLTEK 354
>gi|21389617 apoptosis-inducing factor, mitochondrion-associated, 3
isoform 1 [Homo sapiens]
Length = 605
Score = 78.2 bits (191), Expect = 9e-15
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 37/240 (15%)
Query: 83 YAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ ++ E EK Y R S L +++ K A S P S L++G G A
Sbjct: 152 HKFQVKIEKEKVY-VRASKQALQLQRRTKVMAKCIS-----PSAGYSSSTNVLIVGAGAA 205
Query: 143 AFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERS 202
A ++R R+++ + D LPY RP LSK L + +
Sbjct: 206 GLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSL-----------------DTQPEQ 248
Query: 203 IYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG 262
+ +P F+ + G+ VLT +VV +DVR V DG ++ Y K L+A G
Sbjct: 249 LALRPKEFFRAY---------GIEVLTEAQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGS 299
Query: 263 TPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRK 322
+P++LS G EV++ T+ R D + +++R +++ ++G GFLG E+A L K
Sbjct: 300 SPKTLSC---KGKEVENVFTI-RTPEDANRVVRLARG-RNVVVVGAGFLGMEVAAYLTEK 354
>gi|22202631 programmed cell death 8 isoform 3 [Homo sapiens]
Length = 326
Score = 74.3 bits (181), Expect = 1e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP 35
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP 35
>gi|117168279 ovary-specific acidic protein [Homo sapiens]
Length = 240
Score = 45.4 bits (106), Expect = 7e-05
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 52 RQMASSGASGGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQK 111
R+M+S+ G N + L+VG++ G YAYKT+ D+ ++ E + L +++
Sbjct: 31 RRMSSNRFPGSSGSNMIYYLVVGVTVSAGGYYAYKTVTSDQAKHTEHKTNL-----KEKT 85
Query: 112 KAALSASEGEE---VPQDKAPSHVPFLLIGGGTAAFAAARSIRARD-PGARVLIVSEDPE 167
KA + +GE+ +KA S P LI A + A + P A V+++ E
Sbjct: 86 KAEIHPFQGEKENVAETEKASSEAPEELI-------VEAEVVDAEESPSATVVVIKEASA 138
Query: 168 LP 169
P
Sbjct: 139 CP 140
>gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain 1
[Homo sapiens]
Length = 500
Score = 37.4 bits (85), Expect = 0.018
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 36/189 (19%)
Query: 129 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMR--PPLSKELWFSDDPN 186
P+ F+++GGG A A + P +L+V+ P + + +SK L D
Sbjct: 8 PTAGKFVVVGGGIAGVTCAEQLATHFPSEDILLVTASPVIKAVTNFKQISKILEEFDVEE 67
Query: 187 VTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLN 246
+ T+ K++ P+ V IE+G V QL ++ +
Sbjct: 68 QSSTMLGKRF-----------PNIKV-------IESG---------VKQLKSEEHCIVTE 100
Query: 247 DGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITII 306
DG+Q Y+K + G P+ + E R + +K + K I II
Sbjct: 101 DGNQHVYKKLCLCAGAKPKLI-------CEGNPYVLGIRDTDSAQEFQKQLTKAKRIMII 153
Query: 307 GGGFLGSEL 315
G G + EL
Sbjct: 154 GNGGIALEL 162
>gi|14318424 apoptosis-inducing factor (AIF)-like
mitchondrion-associated inducer of death [Homo sapiens]
Length = 373
Score = 36.2 bits (82), Expect = 0.041
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 233 VVQLDVRDNMVKLNDGSQITYEKCLIATGGT---PRSLSAIDRAGAEVKSRTTLFRKIGD 289
VV +D+++ MV L G + + ++ATG T P + + A +++ + R++
Sbjct: 82 VVGIDLKNQMVLLQGGEALPFSHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQV-- 139
Query: 290 FRSLEKISREVKSITIIGGGFLGSELACAL 319
+ + I ++GGG G E+A +
Sbjct: 140 --------QRSRFIVVVGGGSAGVEMAAEI 161
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 32.7 bits (73), Expect = 0.45
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 107 EQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDP 155
E+ +++ A SE D PS P + GG AA AA R R P
Sbjct: 214 EEAREERARGCSEASRTSSDSGPSRAPAARVVGGEAAATAAARARPRAP 262
>gi|50301238 glutathione reductase [Homo sapiens]
Length = 522
Score = 32.0 bits (71), Expect = 0.77
Identities = 64/249 (25%), Positives = 91/249 (36%), Gaps = 51/249 (20%)
Query: 104 LTPEQKQKKAALS---ASEGEEVPQDKAPS-----HVPFLLIGGGTAAFAAARSIRARDP 155
L PE ALS A E PQ P+ +L+IGGG+ A+AR RA +
Sbjct: 29 LLPEPAALTRALSRAMACRQEPQPQGPPPAAGAVASYDYLVIGGGSGGLASAR--RAAEL 86
Query: 156 GARVLIVSED------------PELPYMRPPLSKELWFSDD------PNVTKTLRFKQWN 197
GAR +V P+ + E F D P+ ++
Sbjct: 87 GARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSE--FMHDHADYGFPSCEGKFNWRVIK 144
Query: 198 GKERSIYFQPPSFYVSAQDLPHIE-NGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKC 256
K + + + Y + HIE G A T ++V G + T
Sbjct: 145 EKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEV--------SGKKYTAPHI 196
Query: 257 LIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELA 316
LIATGG P + GA + + G F+ E R V I+G G++ E+A
Sbjct: 197 LIATGGMPSTPHESQIPGASLGITSD-----GFFQLEELPGRSV----IVGAGYIAVEMA 247
Query: 317 ---CALGRK 322
ALG K
Sbjct: 248 GILSALGSK 256
>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
8 [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 1.0
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 26 RSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGASGGKIDNSVLVLIVGLSTVGAGAYAY 85
R P Q L +LF W+ P Q+T + S A+ GK VL+L+ L G Y
Sbjct: 12 RIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGK---EVLLLVHNLPQDPRGYNWY 68
Query: 86 KTMKEDEKRYNERISGLGLTPEQKQKKAALSASE 119
K D N RI G ++ +Q A S E
Sbjct: 69 KGETVDA---NRRIIGYVISNQQITPGPAYSNRE 99
>gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo
sapiens]
Length = 507
Score = 30.0 bits (66), Expect = 2.9
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 54 MASSGASGGKI--DNSVLVLIVGL--STVGA-----GAYAYKTMKEDEKRYNERISGLGL 104
M +S A+ KI NS LI+G +TV A GA+ + K D ER+ +
Sbjct: 166 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSG 225
Query: 105 TPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
PEQ +K L + +E PQ + ++ + + G A
Sbjct: 226 EPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVA 263
>gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo
sapiens]
Length = 483
Score = 29.6 bits (65), Expect = 3.8
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 64 IDNSVLVLIVGL--STVGA-----GAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALS 116
+ NS LI+G +TV A GA+ + K D ER+ + PEQ +K L
Sbjct: 154 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELI 213
Query: 117 ASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ +E PQ + ++ + + G A
Sbjct: 214 IQKIQEDPQSGSCLNISYANVTGPVA 239
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 29.6 bits (65), Expect = 3.8
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 67 SVLVLIVGLSTVGAGAYAYKTMKE-DEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQ 125
+V+++++GL T+G+ + ++ E +R NE S L E K KKA L A +V
Sbjct: 251 AVILMVLGLLTIGSIFFTWRLYNERPRERRNEFSSKERLLEELKWKKATLHA---VDVTL 307
Query: 126 DKAPSHVPFLLIGGGTAAFAAARSIRARD 154
D +H P L + + ++S+R D
Sbjct: 308 DPDTAH-PHLFL------YEDSKSVRLED 329
>gi|34147522 chaperone, ABC1 activity of bc1 complex like precursor
[Homo sapiens]
Length = 647
Score = 29.3 bits (64), Expect = 5.0
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 106 PEQKQKKAALSASEGE-EVPQDKAPSHVPF--LLIGGGTAAFA--AARSIRARDPGARVL 160
PE KQ K LS E +VP + F L +G G A A A +S+R+ DP +
Sbjct: 188 PENKQHKQTLSEHARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSEDPSGKKA 247
Query: 161 IVSEDPEL 168
++ P L
Sbjct: 248 VLGSSPFL 255
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 28.9 bits (63), Expect = 6.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 18 PLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGASGGKIDNSVLVLIVGLST 77
PL + V +SP Q + PG Q + SS +GG +D SVLV + LS
Sbjct: 126 PLSQQVQTQSPTQPSPGPGQALQNVRAGAP-GPGLGLCSSSPTGGFVDASVLVRQISLSP 184
Query: 78 VGAGAYAYK 86
G + ++
Sbjct: 185 SSGGHFVFQ 193
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 28.5 bits (62), Expect = 8.5
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 162 VSEDPELPYMRPPLSKELWFSDDPNVTKTLRF--KQWNGKERSIYFQPPSFYVSAQDLPH 219
+S+ P+L + PP K+ NV++ LR G+E S++ + +AQ H
Sbjct: 1195 ISKKPKLFLVVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAKESSAAQAGSH 1254
Query: 220 IENGGVAVLTG 230
+ G +VL G
Sbjct: 1255 ATHPGTSVLEG 1265
>gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens]
Length = 590
Score = 28.5 bits (62), Expect = 8.5
Identities = 17/93 (18%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 30 QRNRLPGNLFQRWHVPLELQMTRQMASSGASGGKIDNSVLVLIVGLSTVGAGAYAYKTMK 89
+RNR+ Q+ +E + + S G+ K + +V +++ + +
Sbjct: 99 ERNRIQMRSLQQQFSRMEETVRNLLQSQGSPEQKKEETVNIMVY-----------QEKLS 147
Query: 90 EDEKRYNERISGLGLTPEQKQKKAALSASEGEE 122
E+E+++ E + L + ++ + + S EG+E
Sbjct: 148 EEERKHKEALEDLHMVVDEDSRSESSSTDEGKE 180
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 28.5 bits (62), Expect = 8.5
Identities = 17/93 (18%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 30 QRNRLPGNLFQRWHVPLELQMTRQMASSGASGGKIDNSVLVLIVGLSTVGAGAYAYKTMK 89
+RNR+ Q+ +E + + S G+ K + +V +++ + +
Sbjct: 99 ERNRIQMRSLQQQFSRMEETVRNLLQSQGSPEQKKEETVNIMVY-----------QEKLS 147
Query: 90 EDEKRYNERISGLGLTPEQKQKKAALSASEGEE 122
E+E+++ E + L + ++ + + S EG+E
Sbjct: 148 EEERKHKEALEDLHMVVDEDSRSESSSTDEGKE 180
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,481,775
Number of Sequences: 37866
Number of extensions: 551645
Number of successful extensions: 1480
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1459
Number of HSP's gapped (non-prelim): 24
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.