Guide to the Human Genome
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Name: GUCY1A3 Sequence: fasta or formatted (366aa) NCBI GI: 194595480
Description:

guanylate cyclase 1, soluble, alpha 3 isoform C

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [690aa] guanylate cyclase 1, soluble, alpha 3 isoform A
alt prot [690aa] guanylate cyclase 1, soluble, alpha 3 isoform A
alt prot [690aa] guanylate cyclase 1, soluble, alpha 3 isoform A
alt prot [455aa] guanylate cyclase 1, soluble, alpha 3 isoform B
alt prot [624aa] guanylate cyclase 1, soluble, alpha 3 isoform D
alt prot [690aa] guanylate cyclase 1, soluble, alpha 3 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         16           3
 C cysteine            3.0         11           1
 D aspartate           3.8         14           2
 E glutamate           8.7         32           2
 F phenylalanine       6.6         24           2
 G glycine             4.1         15           2
 H histidine           2.2          8           1
 I isoleucine          5.7         21           2
 K lysine              8.2         30           2
 L leucine             9.6         35           2
 M methionine          2.5          9           1
 N asparagine          3.6         13           1
 P proline             5.5         20           2
 Q glutamine           3.8         14           1
 R arginine            5.2         19           2
 S serine              9.0         33           2
 T threonine           5.5         20           2
 V valine              6.3         23           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.2          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanylate cyclase 1, soluble, alpha 3 isoform C [Ho... 
GUCY1A3               0.992   guanylate cyclase 1, soluble, alpha 3 isoform D [Ho...
GUCY1A3               0.992   guanylate cyclase 1, soluble, alpha 3 isoform A [Ho...
GUCY1A3               0.992   guanylate cyclase 1, soluble, alpha 3 isoform A [Ho...
GUCY1A3               0.992   guanylate cyclase 1, soluble, alpha 3 isoform A [Hom...
GUCY1A3               0.992   guanylate cyclase 1, soluble, alpha 3 isoform A [Ho...
GUCY1A3               0.344   guanylate cyclase 1, soluble, alpha 3 isoform B [Ho...
GUCY1A2               0.185   guanylate cyclase 1, soluble, alpha 2 
GUCY1B3               0.073   guanylate cyclase 1, soluble, beta 3 
KIAA1211              0.008   hypothetical protein LOC57482 
NEK3                  0.007   NIMA-related kinase 3 isoform a 
NEK3                  0.007   NIMA-related kinase 3 isoform a 
MACF1                 0.007   microfilament and actin filament cross-linker protei...
NEK3                  0.007   NIMA-related kinase 3 isoform b 
SRCAP                 0.007   Snf2-related CBP activator protein 
RSL1D1                0.006   ribosomal L1 domain containing 1 
POLA2                 0.006   DNA-directed DNA polymerase alpha 2 
TAF1                  0.006   TBP-associated factor 1 isoform 2 
TAF1                  0.006   TBP-associated factor 1 isoform 1 
SLC4A7                0.006   solute carrier family 4, sodium bicarbonate cotrans...
PRDM8                 0.004   PR domain containing 8 
PRDM8                 0.004   PR domain containing 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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