Guide to the Human Genome
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Name: NOTUM Sequence: fasta or formatted (496aa) NCBI GI: 194394139
Description:

notum pectinacetylesterase homolog

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         30           2
 C cysteine            3.4         17           1
 D aspartate           4.4         22           1
 E glutamate           5.6         28           2
 F phenylalanine       3.4         17           2
 G glycine             8.3         41           2
 H histidine           2.6         13           1
 I isoleucine          2.4         12           3
 K lysine              2.8         14           1
 L leucine            10.9         54           4
 M methionine          2.4         12           1
 N asparagine          3.8         19           1
 P proline             6.2         31           5
 Q glutamine           5.2         26           2
 R arginine            7.5         37           3
 S serine              7.7         38           2
 T threonine           4.8         24           1
 V valine              6.7         33           2
 W tryptophan          2.8         14           2
 Y tyrosine            2.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   notum pectinacetylesterase homolog 
HOXD3                 0.007   homeobox D3 
NUFIP1                0.006   nuclear fragile X mental retardation protein intera...
TNXB                  0.005   tenascin XB isoform 1 precursor 
MDGA1                 0.005   MAM domain containing glycosylphosphatidylinositol a...
FOXO3                 0.005   forkhead box O3A 
FOXO3                 0.005   forkhead box O3A 
RANBP9                0.005   RAN binding protein 9 
SF1                   0.005   splicing factor 1 isoform 3 
SF1                   0.005   splicing factor 1 isoform 2 
SF1                   0.005   splicing factor 1 isoform 1 
ZBTB47                0.005   zinc finger protein 651 
LOC645955             0.004   PREDICTED: hypothetical protein 
LOC645955             0.004   PREDICTED: hypothetical protein 
LOC645955             0.004   PREDICTED: hypothetical protein 
AMDHD2                0.004   amidohydrolase domain containing 2 isoform 2 
AMDHD2                0.004   amidohydrolase domain containing 2 isoform 1 
MICALCL               0.004   MICAL C-terminal like 
WDR72                 0.004   WD repeat domain 72 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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