Guide to the Human Genome
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Name: AMDHD2 Sequence: fasta or formatted (594aa) NCBI GI: 224922791
Description:

amidohydrolase domain containing 2 isoform 2

Referenced in:

N-Acetyl Sugars and Hyaluronan

Other entries for this name:
alt prot [439aa] amidohydrolase domain containing 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         60           2
 C cysteine            2.9         17           2
 D aspartate           4.9         29           2
 E glutamate           4.2         25           2
 F phenylalanine       3.5         21           2
 G glycine            10.9         65           2
 H histidine           3.7         22           2
 I isoleucine          3.7         22           1
 K lysine              1.9         11           1
 L leucine            11.3         67           2
 M methionine          1.2          7           1
 N asparagine          1.2          7           1
 P proline             7.7         46           2
 Q glutamine           3.7         22           2
 R arginine            7.2         43           2
 S serine              5.9         35           2
 T threonine           5.1         30           1
 V valine              7.9         47           2
 W tryptophan          2.2         13           1
 Y tyrosine            0.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amidohydrolase domain containing 2 isoform 2 
AMDHD2                0.701   amidohydrolase domain containing 2 isoform 1 
SERAC1                0.006   serine active site containing 1 
KIAA1632              0.006   hypothetical protein LOC57724 
ADAMTS13              0.005   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.005   ADAM metallopeptidase with thrombospondin type 1 mot...
TNFAIP2               0.005   tumor necrosis factor, alpha-induced protein 2 [Homo...
EPHA2                 0.004   ephrin receptor EphA2 
ZNF48                 0.004   zinc finger protein 48 
STC2                  0.004   stanniocalcin 2 precursor 
CBFA2T3               0.004   myeloid translocation gene on chromosome 16 isoform ...
CBFA2T3               0.004   myeloid translocation gene on chromosome 16 isoform ...
PC                    0.004   pyruvate carboxylase precursor 
PC                    0.004   pyruvate carboxylase precursor 
PC                    0.004   pyruvate carboxylase precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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