Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 194239729
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194239729 eukaryotic translation elongation factor 1 delta
isoform 4 [Homo sapiens]
(257 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194239729 eukaryotic translation elongation factor 1 delta is... 509 e-145
gi|194239731 eukaryotic translation elongation factor 1 delta is... 496 e-141
gi|194239727 eukaryotic translation elongation factor 1 delta is... 496 e-141
gi|194239725 eukaryotic translation elongation factor 1 delta is... 496 e-141
gi|194239723 eukaryotic translation elongation factor 1 delta is... 496 e-141
gi|25453472 eukaryotic translation elongation factor 1 delta iso... 496 e-141
gi|25453474 eukaryotic translation elongation factor 1 delta iso... 496 e-141
gi|11136628 eukaryotic translation elongation factor 1 beta 2 [H... 224 4e-59
gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Ho... 224 4e-59
gi|83376130 eukaryotic translation elongation factor 1 beta 2 [H... 224 4e-59
gi|51093861 caspase recruitment domain protein 10 [Homo sapiens] 42 4e-04
gi|55956788 nucleolin [Homo sapiens] 39 0.006
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 39 0.006
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 39 0.006
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 39 0.006
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 38 0.010
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 36 0.029
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 36 0.038
gi|31982906 cingulin-like 1 [Homo sapiens] 36 0.038
gi|91825557 kinesin light chain 3 [Homo sapiens] 35 0.049
gi|228008351 coiled-coil domain containing 48 [Homo sapiens] 35 0.064
gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming ... 34 0.11
gi|39930479 DIX domain containing 1 isoform b [Homo sapiens] 34 0.11
gi|83816971 DIX domain containing 1 isoform a [Homo sapiens] 34 0.11
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 34 0.14
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 34 0.14
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 34 0.14
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 34 0.14
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 34 0.14
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 34 0.14
>gi|194239729 eukaryotic translation elongation factor 1 delta
isoform 4 [Homo sapiens]
Length = 257
Score = 509 bits (1312), Expect = e-145
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQSSGPGASSGTSGDHGELVVRI 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQSSGPGASSGTSGDHGELVVRI
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQSSGPGASSGTSGDHGELVVRI 60
Query: 61 ASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKK 120
ASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKK
Sbjct: 61 ASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKK 120
Query: 121 PATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKP 180
PATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKP
Sbjct: 121 PATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKP 180
Query: 181 WDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEIT 240
WDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEIT
Sbjct: 181 WDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEIT 240
Query: 241 KFEEHVQSVDIAAFNKI 257
KFEEHVQSVDIAAFNKI
Sbjct: 241 KFEEHVQSVDIAAFNKI 257
>gi|194239731 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 496 bits (1277), Expect = e-141
Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
Query: 40 ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96
SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
Query: 97 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
Query: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
Query: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
>gi|194239727 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 496 bits (1277), Expect = e-141
Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
Query: 40 ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96
SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
Query: 97 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
Query: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
Query: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
>gi|194239725 eukaryotic translation elongation factor 1 delta
isoform 3 [Homo sapiens]
Length = 646
Score = 496 bits (1277), Expect = e-141
Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ
Sbjct: 366 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 425
Query: 40 ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96
SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 426 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 485
Query: 97 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 486 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 545
Query: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 546 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 605
Query: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 606 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 646
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 9 EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ-------SSGPGASSGTSGDHGE 55
E +W DK KY++AERRFYE A +++Q +GPG D E
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQLPAEGPAMNGPGQDDPEDADEAE 64
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 10 KIWFDKFKYDDAERRFYEQM-NGPVAGASRQSSGPGASSG 48
++W +K +YD AER FYE + +G G R G + G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEG 270
>gi|194239723 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 496 bits (1277), Expect = e-141
Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ
Sbjct: 367 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 426
Query: 40 ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96
SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 427 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 486
Query: 97 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 487 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 546
Query: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 547 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 606
Query: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 607 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 647
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 9 EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ-------SSGPGASSGTSGDHGE 55
E +W DK KY++AERRFYE A +++Q +GPG D E
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQLPAEGPAMNGPGQDDPEDADEAE 64
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 10 KIWFDKFKYDDAERRFYEQM-NGPVAGASRQSSGPGASSG 48
++W +K +YD AER FYE + +G G R G + G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEG 270
>gi|25453472 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 496 bits (1277), Expect = e-141
Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
Query: 40 ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96
SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
Query: 97 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
Query: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
Query: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
>gi|25453474 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 496 bits (1277), Expect = e-141
Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ
Sbjct: 367 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 426
Query: 40 ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96
SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 427 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 486
Query: 97 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 487 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 546
Query: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 547 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 606
Query: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 607 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 647
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 9 EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ-------SSGPGASSGTSGDHGE 55
E +W DK KY++AERRFYE A +++Q +GPG D E
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQLPAEGPAMNGPGQDDPEDADEAE 64
Score = 30.4 bits (67), Expect = 1.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 10 KIWFDKFKYDDAERRFYEQM-NGPVAGASRQSSGPGASSG 48
++W +K +YD AER FYE + +G G R G + G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEG 270
>gi|11136628 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 224 bits (572), Expect = 4e-59
Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Query: 114 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 173
VE AT ++DD DDIDLFGSD+EEE +EA +LREERL QY KKAKKPALVAKSS
Sbjct: 84 VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141
Query: 174 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 233
ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201
Query: 234 LLEEEITKFEEHVQSVDIAAFNKI 257
+LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225
>gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 224 bits (572), Expect = 4e-59
Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Query: 114 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 173
VE AT ++DD DDIDLFGSD+EEE +EA +LREERL QY KKAKKPALVAKSS
Sbjct: 84 VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141
Query: 174 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 233
ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201
Query: 234 LLEEEITKFEEHVQSVDIAAFNKI 257
+LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225
>gi|83376130 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 224 bits (572), Expect = 4e-59
Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Query: 114 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 173
VE AT ++DD DDIDLFGSD+EEE +EA +LREERL QY KKAKKPALVAKSS
Sbjct: 84 VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141
Query: 174 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 233
ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201
Query: 234 LLEEEITKFEEHVQSVDIAAFNKI 257
+LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225
>gi|51093861 caspase recruitment domain protein 10 [Homo sapiens]
Length = 1032
Score = 42.4 bits (98), Expect = 4e-04
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 30/210 (14%)
Query: 56 LVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKS-SPGHRATAPQTQHVSPMRQV 114
+ +R+A L E S ++LQ A+ +L+ +++ LE+ + RA P
Sbjct: 209 IAMRLAQLSEEKNSAVLRSRDLQLAVDQLKLKVSRLEEECALLRRARGP----------- 257
Query: 115 EPPA--KKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKS 172
PP +K ++ E D++DL E + A LRE L++ +++A +P
Sbjct: 258 -PPGAEEKEKEKEKEKEPDNVDLVSELRAENQRLTASLRE--LQEGLQQEASRPGAPGSE 314
Query: 173 SILLDV--KPWDDETDMAQLEACVRSIQLDG-LVWG-------ASKLVPVGYGIRKLQIQ 222
ILLD+ W + D Q E C + + G L W ++ + R LQ
Sbjct: 315 RILLDILEHDWREAQDSRQ-ELCQKLHAVQGELQWAEELRDQYLQEMEDLRLKHRTLQKD 373
Query: 223 CVVEDDKVGTDL--LEEEITKFEEHVQSVD 250
C + ++ T L LEE + ++ +QS D
Sbjct: 374 CDLYKHRMATVLAQLEEIEKERDQAIQSRD 403
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 38.5 bits (88), Expect = 0.006
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 113 QVEPPAKK-----PATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPA 167
++EP A K PA+ EDDEDD+ D D+EE+D E + + KKA K
Sbjct: 169 EIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAK---GKKAAKVV 225
Query: 168 LVAKSSILLDVKPWDDETD 186
V ++ D +D+ D
Sbjct: 226 PVKAKNVAEDEDEEEDDED 244
Score = 33.9 bits (76), Expect = 0.14
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 42/123 (34%)
Query: 95 SPGHRATA-PQTQHVSPMRQVEPPAKKPATP----------------------------- 124
+PG +A A P + V+P + V P KK ATP
Sbjct: 84 TPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKE 143
Query: 125 -AEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKPWDD 183
++++EDDD + D+E+ED++ ++ E A K A A +S D DD
Sbjct: 144 DSDEEEDDDSEEDEEDDEDEDEDEDEI---------EPAAMKAAAAAPAS--EDEDDEDD 192
Query: 184 ETD 186
E D
Sbjct: 193 EDD 195
Score = 30.8 bits (68), Expect = 1.2
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 126 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPA 167
++D+DDD D D+E++++E + EE +++ K+ K+ A
Sbjct: 244 DEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMA 285
Score = 30.4 bits (67), Expect = 1.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 126 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 173
ED++DDD + D++E+D+E + EE + A K KK K++
Sbjct: 243 EDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAA 290
Score = 29.6 bits (65), Expect = 2.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 126 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKP 180
EDDEDDD + + EEE++E ++E ++ E +K A AK + +P
Sbjct: 251 EDDEDDDDE--DDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEP 303
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 30 NGPVAGASRQSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLN 89
+G +G+S S PG+ G+ GE R+ S ++S Q L+ A+ K E +
Sbjct: 647 SGSSSGSSNSGSQPGSHPGSQSGSGERF-RVRS---SSKSEGSPSQRLENAVKKPEDKKE 702
Query: 90 VLEKSSP-GHRATAPQTQHVSPMRQVEPPAK-------KPATPAEDDEDDDIDLFGSDNE 141
V P G + + + V PP K + D+EDDD++ G+D
Sbjct: 703 VFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQEGADES 762
Query: 142 ---EEDKEAA 148
ED AA
Sbjct: 763 TSGPEDTRAA 772
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 30 NGPVAGASRQSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLN 89
+G +G+S S PG+ G+ GE R+ S ++S Q L+ A+ K E +
Sbjct: 593 SGSSSGSSNSGSQPGSHPGSQSGSGERF-RVRS---SSKSEGSPSQRLENAVKKPEDKKE 648
Query: 90 VLEKSSP-GHRATAPQTQHVSPMRQVEPPAK-------KPATPAEDDEDDDIDLFGSDNE 141
V P G + + + V PP K + D+EDDD++ G+D
Sbjct: 649 VFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQEGADES 708
Query: 142 ---EEDKEAA 148
ED AA
Sbjct: 709 TSGPEDTRAA 718
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 38.5 bits (88), Expect = 0.006
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 30 NGPVAGASRQSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLN 89
+G +G+S S PG+ G+ GE R+ S ++S Q L+ A+ K E +
Sbjct: 755 SGSSSGSSNSGSQPGSHPGSQSGSGERF-RVRS---SSKSEGSPSQRLENAVKKPEDKKE 810
Query: 90 VLEKSSP-GHRATAPQTQHVSPMRQVEPPAK-------KPATPAEDDEDDDIDLFGSDNE 141
V P G + + + V PP K + D+EDDD++ G+D
Sbjct: 811 VFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEDDDVEQEGADES 870
Query: 142 ---EEDKEAA 148
ED AA
Sbjct: 871 TSGPEDTRAA 880
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 37.7 bits (86), Expect = 0.010
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 59 RIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPA 118
+ + L + + L+ +QE + I KLE R+ LE++ +A Q V +
Sbjct: 2124 KCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQAL---LVSADTFQKVEDRKHFGAVE 2180
Query: 119 KKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDV 178
KP E + D + ++KE L EE+L Q+ E+ K V + + L++
Sbjct: 2181 AKPELSLEVQLQAERDAI----DRKEKEITNL-EEQLEQFREELENKNEEVQQLHMQLEI 2235
Query: 179 KPWDDETDMAQLEACVRSIQLD----GLVWGASKLVPV-GYGIRKLQIQCVVEDDKVGTD 233
+ + T + +LE + + D GL S + + + ++++ +V D
Sbjct: 2236 QKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAMSTQDQHVLFGKFAQIIQEKEVEID 2295
Query: 234 LLEEEITKFEEHVQSVDIAAFNKI 257
L E++TK + Q + I NK+
Sbjct: 2296 QLNEQVTKLQ---QQLKITTDNKV 2316
Score = 29.3 bits (64), Expect = 3.5
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 62 SLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKP 121
SLEV+ Q+ R + ++ I+ LE +L + Q Q+E K+
Sbjct: 2186 SLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLH-----MQLEIQKKES 2240
Query: 122 ATPAEDDED------DDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSIL 175
T ++ E DD++ G +E D + Q + ++A+ +K
Sbjct: 2241 TTRLQELEQENKLFKDDMEKLGLAIKESDAMSTQDQHVLFGKFAQIIQEK---------- 2290
Query: 176 LDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYG-IRKL--QIQCVVEDDKVGT 232
E ++ QL V +Q + +K++ IR L QI+C++ D +
Sbjct: 2291 --------EVEIDQLNEQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVK 2342
Query: 233 DLLEEEITKFEEHVQSV 249
EEEI + E ++ +
Sbjct: 2343 RNREEEIEQLNEVIEKL 2359
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 36.2 bits (82), Expect = 0.029
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 15/177 (8%)
Query: 6 LAHEKIWFDKFKYDDAERRFY---EQMNGPVAGASRQSSGPGASSGTSGDHGELVVRIAS 62
LA E K K +++ ++FY E+ +S S G+ SG G+ GE
Sbjct: 656 LAKEWTPAGKAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGE------- 708
Query: 63 LEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPA 122
E S ++ R + LE R + + + S + E K
Sbjct: 709 ---EGDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSK-T 764
Query: 123 TPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPAL-VAKSSILLDV 178
+ + +DE I+ SD+E E + ++ R+ + EKK K+ + K LLD+
Sbjct: 765 SDSSNDESSSIEDSSSDSESESEPESESESRRVTKEKEKKTKQDRTPLTKDVSLLDL 821
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 35.8 bits (81), Expect = 0.038
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 51 GDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSP 110
G + +L+ R + +EN L G + EL++ +++L+ + + +E+ P R A + +
Sbjct: 1117 GAYSDLLQRQKATVLENSKLTGKISELERMVAELKKQKSRVEEELPKVREAA-ENELRKQ 1175
Query: 111 MRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYA-EKKAKKPAL 168
R VE + + + + +L + +KEAA+ ER+RQ E +AK+ A+
Sbjct: 1176 QRNVEDISLQKIRAESEAKQYRREL---ETIVREKEAAERELERVRQLTIEAEAKRAAV 1231
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 35.8 bits (81), Expect = 0.038
Identities = 32/135 (23%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 36 ASRQSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSS 95
ASR ++ +GT +R+ L+ EN+ L+G +EL++ +++L+ ++ L+
Sbjct: 807 ASRSNTSEQDQAGTE-------MRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLK--- 856
Query: 96 PGHRATAPQT--QHVSPMRQVEP------PAKKPATPAEDDEDDDIDLFGSDNEEEDKEA 147
G A A +T ++ +RQ+E +K A A +++++ + + +E
Sbjct: 857 -GDEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQ 915
Query: 148 AQLREERLRQYAEKK 162
QL E+L++ +E+K
Sbjct: 916 KQL-SEKLKEESEQK 929
>gi|91825557 kinesin light chain 3 [Homo sapiens]
Length = 504
Score = 35.4 bits (80), Expect = 0.049
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 56 LVVRIASLEVENQSLRGVVQELQQA-------ISKLEARLNVLEKSSPGHRATAPQTQHV 108
L + +LE E Q LR + L Q + + + RL E+S + +
Sbjct: 91 LSAHVGALEAEKQRLRSQARRLAQENVWLREELEETQRRLRASEESVAQLEEEKRHLEFL 150
Query: 109 SPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEE 142
+RQ +PPA+ + + D LF S+ EE
Sbjct: 151 GQLRQYDPPAESQQSESPPRRDSLASLFPSEEEE 184
>gi|228008351 coiled-coil domain containing 48 [Homo sapiens]
Length = 598
Score = 35.0 bits (79), Expect = 0.064
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 38 RQSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPG 97
R PG SG + R+A LE EN SLR +V++L+ A+ +AR L+
Sbjct: 184 RPPCAPGPDSGPDCE------RVARLEEENSSLRELVEDLRAALQSSDARCLALQVGLWK 237
Query: 98 HRATAPQTQHVSP 110
+A+ + H P
Sbjct: 238 SQASTHEMGHGGP 250
>gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming
sequence [Homo sapiens]
Length = 906
Score = 34.3 bits (77), Expect = 0.11
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 34 AGASRQSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEK 93
AG+ +Q SGP AS+ T+ +L I +L + S + + + L A + +E N+L +
Sbjct: 837 AGSCQQGSGPAASAATASP--QLSSEIENLMSQGYSYQDIQKALVIAQNNIEMAKNILRE 894
Query: 94 ----SSPGHRAT 101
SSP H AT
Sbjct: 895 FVSISSPAHVAT 906
>gi|39930479 DIX domain containing 1 isoform b [Homo sapiens]
Length = 472
Score = 34.3 bits (77), Expect = 0.11
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 17 KYDDAERRFYEQMNGPVAGASRQSSGPGASSGTSGDHGELVVRIASLEVENQSLRG---- 72
K + E Y N G ++G GA+S ++ +L + +L S G
Sbjct: 263 KREADEATNYNSHNSQSNGFLLPTAGKGATSVSNRGTSDLQLVRDALRSLRNSFSGHDPQ 322
Query: 73 --VVQELQQAISKLEARLNVLE---KSSPGHRATAPQTQHVSPMRQVEPPAKK 120
+ L+Q IS L RL+V+E K R +P+TQ S R+ PP K
Sbjct: 323 HHTIDSLEQGISSLMERLHVMETQKKQERKVRVKSPRTQVGSEYRESWPPNSK 375
>gi|83816971 DIX domain containing 1 isoform a [Homo sapiens]
Length = 683
Score = 34.3 bits (77), Expect = 0.11
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 17 KYDDAERRFYEQMNGPVAGASRQSSGPGASSGTSGDHGELVVRIASLEVENQSLRG---- 72
K + E Y N G ++G GA+S ++ +L + +L S G
Sbjct: 474 KREADEATNYNSHNSQSNGFLLPTAGKGATSVSNRGTSDLQLVRDALRSLRNSFSGHDPQ 533
Query: 73 --VVQELQQAISKLEARLNVLE---KSSPGHRATAPQTQHVSPMRQVEPPAKK 120
+ L+Q IS L RL+V+E K R +P+TQ S R+ PP K
Sbjct: 534 HHTIDSLEQGISSLMERLHVMETQKKQERKVRVKSPRTQVGSEYRESWPPNSK 586
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 33.9 bits (76), Expect = 0.14
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 66 ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 125
E R ++ +LQ IS E + + E SS + + + + + E + +
Sbjct: 243 EKMEERDLLSDLQD-ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEE 301
Query: 126 EDDEDDDIDLFGSDNEEEDKEAA-QLREERLRQYAEKKAKKPALVAKSS 173
E++E+++ + GS++EE +++A ++ EE + + E++ + LV S
Sbjct: 302 EEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPES 350
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 33.9 bits (76), Expect = 0.14
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 66 ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 125
E R ++ +LQ IS E + + E SS + + + + + E + +
Sbjct: 253 EKMEERDLLSDLQD-ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEE 311
Query: 126 EDDEDDDIDLFGSDNEEEDKEAA-QLREERLRQYAEKKAKKPALVAKSS 173
E++E+++ + GS++EE +++A ++ EE + + E++ + LV S
Sbjct: 312 EEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPES 360
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 33.9 bits (76), Expect = 0.14
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 92 EKSSPGHR---ATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSD-NEEEDKEA 147
+ ++PG R A A S E + P AEDDED+D D D +++ED +
Sbjct: 1653 DAAAPGPREGAAAAAAAAGESSQEDEEEELELPEEEAEDDEDEDDDEDDDDEDDDEDDDD 1712
Query: 148 AQLR---EERLRQYAEKK----AKKPALVAKSSI 174
LR EE L + A + A+ PAL A +++
Sbjct: 1713 EDLRTDSEESLPEAAAEAAGAGARTPALAALAAL 1746
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 33.9 bits (76), Expect = 0.14
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 91 LEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQL 150
++ S H +PQ+ V P R +P P D+E I + E++K+ +L
Sbjct: 423 IKSESTNHEQQSPQSGKVIPDRSTKPVVFSPTLMLTDEEKARIHAETALLMEKNKQEKEL 482
Query: 151 REERLRQYAEKKAKK 165
RE + + EK K+
Sbjct: 483 RERQQEEQKEKLRKE 497
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 33.9 bits (76), Expect = 0.14
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 91 LEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQL 150
++ S H +PQ+ V P R +P P D+E I + E++K+ +L
Sbjct: 423 IKSESTNHEQQSPQSGKVIPDRSTKPVVFSPTLMLTDEEKARIHAETALLMEKNKQEKEL 482
Query: 151 REERLRQYAEKKAKK 165
RE + + EK K+
Sbjct: 483 RERQQEEQKEKLRKE 497
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 33.9 bits (76), Expect = 0.14
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 91 LEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQL 150
++ S H +PQ+ V P R +P P D+E I + E++K+ +L
Sbjct: 423 IKSESTNHEQQSPQSGKVIPDRSTKPVVFSPTLMLTDEEKARIHAETALLMEKNKQEKEL 482
Query: 151 REERLRQYAEKKAKK 165
RE + + EK K+
Sbjct: 483 RERQQEEQKEKLRKE 497
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,997,121
Number of Sequences: 37866
Number of extensions: 458938
Number of successful extensions: 4470
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 3844
Number of HSP's gapped (non-prelim): 682
length of query: 257
length of database: 18,247,518
effective HSP length: 100
effective length of query: 157
effective length of database: 14,460,918
effective search space: 2270364126
effective search space used: 2270364126
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.