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Search of human proteins with 194239727
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194239727 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
(281 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194239731 eukaryotic translation elongation factor 1 delta is... 553 e-158
gi|194239727 eukaryotic translation elongation factor 1 delta is... 553 e-158
gi|194239725 eukaryotic translation elongation factor 1 delta is... 553 e-158
gi|194239723 eukaryotic translation elongation factor 1 delta is... 553 e-158
gi|25453472 eukaryotic translation elongation factor 1 delta iso... 553 e-158
gi|25453474 eukaryotic translation elongation factor 1 delta iso... 553 e-158
gi|194239729 eukaryotic translation elongation factor 1 delta is... 496 e-141
gi|11136628 eukaryotic translation elongation factor 1 beta 2 [H... 224 5e-59
gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Ho... 224 5e-59
gi|83376130 eukaryotic translation elongation factor 1 beta 2 [H... 224 5e-59
gi|51093861 caspase recruitment domain protein 10 [Homo sapiens] 44 1e-04
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 40 0.002
gi|55956788 nucleolin [Homo sapiens] 39 0.007
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 38 0.011
gi|31982906 cingulin-like 1 [Homo sapiens] 38 0.011
gi|21735548 centrosomal protein 2 [Homo sapiens] 37 0.025
gi|7661990 mastermind-like 1 [Homo sapiens] 36 0.033
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 36 0.043
gi|91825557 kinesin light chain 3 [Homo sapiens] 35 0.056
gi|228008351 coiled-coil domain containing 48 [Homo sapiens] 34 0.13
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 34 0.13
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 34 0.13
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 34 0.13
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 34 0.13
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 34 0.13
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 34 0.13
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 34 0.13
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 34 0.13
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 34 0.16
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 34 0.16
>gi|194239731 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 553 bits (1425), Expect = e-158
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
Query: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
>gi|194239727 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 553 bits (1425), Expect = e-158
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
Query: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
>gi|194239725 eukaryotic translation elongation factor 1 delta
isoform 3 [Homo sapiens]
Length = 646
Score = 553 bits (1425), Expect = e-158
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 366 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 425
Query: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 426 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 485
Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 486 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 545
Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 546 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 605
Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 606 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 646
Score = 36.6 bits (83), Expect = 0.025
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 9 EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ 39
E +W DK KY++AERRFYE A +++Q
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQ 41
Score = 29.3 bits (64), Expect = 4.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 10 KIWFDKFKYDDAERRFYEQM-NGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPG 68
++W +K +YD AER FYE + +G G R + A + R+ +++ G+ G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEGARRGRRDRRGRNILGNKRAG 290
>gi|194239723 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 553 bits (1425), Expect = e-158
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 367 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 426
Query: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 427 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 486
Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 487 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 546
Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 547 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 606
Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 607 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 647
Score = 36.6 bits (83), Expect = 0.025
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 9 EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ 39
E +W DK KY++AERRFYE A +++Q
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQ 41
Score = 29.3 bits (64), Expect = 4.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 10 KIWFDKFKYDDAERRFYEQM-NGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPG 68
++W +K +YD AER FYE + +G G R + A + R+ +++ G+ G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEGARRGRRDRRGRNILGNKRAG 290
>gi|25453472 eukaryotic translation elongation factor 1 delta
isoform 2 [Homo sapiens]
Length = 281
Score = 553 bits (1425), Expect = e-158
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
Query: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
>gi|25453474 eukaryotic translation elongation factor 1 delta
isoform 1 [Homo sapiens]
Length = 647
Score = 553 bits (1425), Expect = e-158
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS
Sbjct: 367 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 426
Query: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 427 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 486
Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 487 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 546
Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 547 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 606
Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 607 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 647
Score = 36.6 bits (83), Expect = 0.025
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 9 EKIWFDKFKYDDAERRFYEQMNGPVAGASRQ 39
E +W DK KY++AERRFYE A +++Q
Sbjct: 11 ETVWEDKHKYEEAERRFYEHEATQAAASAQQ 41
Score = 29.3 bits (64), Expect = 4.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 10 KIWFDKFKYDDAERRFYEQM-NGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPG 68
++W +K +YD AER FYE + +G G R + A + R+ +++ G+ G
Sbjct: 231 EVWLEKPRYDAAERGFYEALFDGHPPGKVRLQERAGLAEGARRGRRDRRGRNILGNKRAG 290
>gi|194239729 eukaryotic translation elongation factor 1 delta
isoform 4 [Homo sapiens]
Length = 257
Score = 496 bits (1277), Expect = e-141
Identities = 257/281 (91%), Positives = 257/281 (91%), Gaps = 24/281 (8%)
Query: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKS 60
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ
Sbjct: 1 MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQ--------------------- 39
Query: 61 LAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 120
SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP
Sbjct: 40 ---SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSP 96
Query: 121 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 180
GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR
Sbjct: 97 GHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLR 156
Query: 181 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 240
QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI
Sbjct: 157 QYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGI 216
Query: 241 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI
Sbjct: 217 RKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 257
>gi|11136628 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 224 bits (572), Expect = 5e-59
Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Query: 138 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
VE AT ++DD DDIDLFGSD+EEE +EA +LREERL QY KKAKKPALVAKSS
Sbjct: 84 VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141
Query: 198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 257
ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201
Query: 258 LLEEEITKFEEHVQSVDIAAFNKI 281
+LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225
>gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 224 bits (572), Expect = 5e-59
Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Query: 138 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
VE AT ++DD DDIDLFGSD+EEE +EA +LREERL QY KKAKKPALVAKSS
Sbjct: 84 VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141
Query: 198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 257
ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201
Query: 258 LLEEEITKFEEHVQSVDIAAFNKI 281
+LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225
>gi|83376130 eukaryotic translation elongation factor 1 beta 2 [Homo
sapiens]
Length = 225
Score = 224 bits (572), Expect = 5e-59
Identities = 113/144 (78%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Query: 138 VEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
VE AT ++DD DDIDLFGSD+EEE +EA +LREERL QY KKAKKPALVAKSS
Sbjct: 84 VEDTTGSGATDSKDD--DDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS 141
Query: 198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD 257
ILLDVKPWDDETDMA+LE CVRSIQ DGLVWG+SKLVPVGYGI+KLQIQCVVEDDKVGTD
Sbjct: 142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD 201
Query: 258 LLEEEITKFEEHVQSVDIAAFNKI 281
+LEE+IT FE++VQS+D+AAFNKI
Sbjct: 202 MLEEQITAFEDYVQSMDVAAFNKI 225
>gi|51093861 caspase recruitment domain protein 10 [Homo sapiens]
Length = 1032
Score = 44.3 bits (103), Expect = 1e-04
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 33/288 (11%)
Query: 3 TNFLAHEKIWFDKFKYDDAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLA 62
T FL E + + +R Q G V R G LRD +A+E Q+
Sbjct: 133 TQFLMTEVRRLREARKSQLQREQQLQARGRVLEEERA--GLEQRLRDQQQAQERCQRLRE 190
Query: 63 G-SSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKS-SP 120
+G ++ + +R+A L E S ++LQ A+ +L+ +++ LE+ +
Sbjct: 191 DWEAGSLELLRLKDENYMIAMRLAQLSEEKNSAVLRSRDLQLAVDQLKLKVSRLEEECAL 250
Query: 121 GHRATAPQTQHVSPMRQVEPPA--KKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 178
RA P PP +K ++ E D++DL E + A LRE
Sbjct: 251 LRRARGP------------PPGAEEKEKEKEKEKEPDNVDLVSELRAENQRLTASLRE-- 296
Query: 179 LRQYAEKKAKKPALVAKSSILLDV--KPWDDETDMAQLEACVRSIQLDG-LVWG------ 229
L++ +++A +P ILLD+ W + D Q E C + + G L W
Sbjct: 297 LQEGLQQEASRPGAPGSERILLDILEHDWREAQDSRQ-ELCQKLHAVQGELQWAEELRDQ 355
Query: 230 -ASKLVPVGYGIRKLQIQCVVEDDKVGTDL--LEEEITKFEEHVQSVD 274
++ + R LQ C + ++ T L LEE + ++ +QS D
Sbjct: 356 YLQEMEDLRLKHRTLQKDCDLYKHRMATVLAQLEEIEKERDQAIQSRD 403
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 12/170 (7%)
Query: 34 AGASRQENGASVILRDIARARENIQKSLAGSSGPGASSGTSGDHGELVVRIASLEVENQS 93
AG ++QEN A + ++ S S G+ SG G+ GE E S
Sbjct: 663 AGKAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGE----------EGDS 712
Query: 94 LRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPAEDDE 153
++ R + LE R + + + S + E K + + +DE
Sbjct: 713 NEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSK-TSDSSNDE 771
Query: 154 DDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPAL-VAKSSILLDV 202
I+ SD+E E + ++ R+ + EKK K+ + K LLD+
Sbjct: 772 SSSIEDSSSDSESESEPESESESRRVTKEKEKKTKQDRTPLTKDVSLLDL 821
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 38.5 bits (88), Expect = 0.007
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 137 QVEPPAKK-----PATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPA 191
++EP A K PA+ EDDEDD+ D D+EE+D E + + KKA K
Sbjct: 169 EIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAK---GKKAAKVV 225
Query: 192 LVAKSSILLDVKPWDDETD 210
V ++ D +D+ D
Sbjct: 226 PVKAKNVAEDEDEEEDDED 244
Score = 33.9 bits (76), Expect = 0.16
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 42/123 (34%)
Query: 119 SPGHRATA-PQTQHVSPMRQVEPPAKKPATP----------------------------- 148
+PG +A A P + V+P + V P KK ATP
Sbjct: 84 TPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKE 143
Query: 149 -AEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKPWDD 207
++++EDDD + D+E+ED++ ++ E A K A A +S D DD
Sbjct: 144 DSDEEEDDDSEEDEEDDEDEDEDEDEI---------EPAAMKAAAAAPAS--EDEDDEDD 192
Query: 208 ETD 210
E D
Sbjct: 193 EDD 195
Score = 30.8 bits (68), Expect = 1.4
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 150 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPA 191
++D+DDD D D+E++++E + EE +++ K+ K+ A
Sbjct: 244 DEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMA 285
Score = 30.4 bits (67), Expect = 1.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 150 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSS 197
ED++DDD + D++E+D+E + EE + A K KK K++
Sbjct: 243 EDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAA 290
Score = 29.6 bits (65), Expect = 3.1
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 150 EDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDVKP 204
EDDEDDD + + EEE++E ++E ++ E +K A AK + +P
Sbjct: 251 EDDEDDDDE--DDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEP 303
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 37.7 bits (86), Expect = 0.011
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 83 RIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPA 142
+ + L + + L+ +QE + I KLE R+ LE++ +A Q V +
Sbjct: 2124 KCSELLLSKEQLQRDIQERNEEIEKLEFRVRELEQAL---LVSADTFQKVEDRKHFGAVE 2180
Query: 143 KKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSILLDV 202
KP E + D + ++KE L EE+L Q+ E+ K V + + L++
Sbjct: 2181 AKPELSLEVQLQAERDAI----DRKEKEITNL-EEQLEQFREELENKNEEVQQLHMQLEI 2235
Query: 203 KPWDDETDMAQLEACVRSIQLD----GLVWGASKLVPV-GYGIRKLQIQCVVEDDKVGTD 257
+ + T + +LE + + D GL S + + + ++++ +V D
Sbjct: 2236 QKKESTTRLQELEQENKLFKDDMEKLGLAIKESDAMSTQDQHVLFGKFAQIIQEKEVEID 2295
Query: 258 LLEEEITKFEEHVQSVDIAAFNKI 281
L E++TK + Q + I NK+
Sbjct: 2296 QLNEQVTKLQ---QQLKITTDNKV 2316
Score = 29.3 bits (64), Expect = 4.0
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 86 SLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKP 145
SLEV+ Q+ R + ++ I+ LE +L + Q Q+E K+
Sbjct: 2186 SLEVQLQAERDAIDRKEKEITNLEEQLEQFREELENKNEEVQQLH-----MQLEIQKKES 2240
Query: 146 ATPAEDDED------DDIDLFGSDNEEEDKEAAQLREERLRQYAEKKAKKPALVAKSSIL 199
T ++ E DD++ G +E D + Q + ++A+ +K
Sbjct: 2241 TTRLQELEQENKLFKDDMEKLGLAIKESDAMSTQDQHVLFGKFAQIIQEK---------- 2290
Query: 200 LDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYG-IRKL--QIQCVVEDDKVGT 256
E ++ QL V +Q + +K++ IR L QI+C++ D +
Sbjct: 2291 --------EVEIDQLNEQVTKLQQQLKITTDNKVIEEKNELIRDLETQIECLMSDQECVK 2342
Query: 257 DLLEEEITKFEEHVQSV 273
EEEI + E ++ +
Sbjct: 2343 RNREEEIEQLNEVIEKL 2359
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 37.7 bits (86), Expect = 0.011
Identities = 33/147 (22%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 49 DIARARENIQKSLAGSSGPGASSGTSG-DHGELVVRIASLEVENQSLRGVVQELQQAISK 107
++ RE+++++ + S TS D +R+ L+ EN+ L+G +EL++ +++
Sbjct: 788 ELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQ 847
Query: 108 LEARLNVLEKSSPGHRATAPQT--QHVSPMRQVEP------PAKKPATPAEDDEDDDIDL 159
L+ ++ L+ G A A +T ++ +RQ+E +K A A +++++
Sbjct: 848 LQRQIEDLK----GDEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEA 903
Query: 160 FGSDNEEEDKEAAQLREERLRQYAEKK 186
+ + +E QL E+L++ +E+K
Sbjct: 904 AQGNLSQTTQEQKQL-SEKLKEESEQK 929
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 36.6 bits (83), Expect = 0.025
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 48 RDIARARENIQKSLAGSSGPGASSGTSGDHGELVVRIASLEVENQSLRGVVQELQQAISK 107
R++ R+ +Q+ GP + S +H +L++R EVE Q + ELQ+ +
Sbjct: 1697 RELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEH--IHELQELKDQ 1754
Query: 108 LEARLNVL-EKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPAEDDEDDDID-----LFG 161
LE +L L K + + Q + ++Q A++ E +D L
Sbjct: 1755 LEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQ 1814
Query: 162 SDNE----EEDKEAAQLREERLRQYAE 184
D E +++++ AQ +EER+++ A+
Sbjct: 1815 RDQELEALQQEQQQAQGQEERVKEKAD 1841
Score = 33.1 bits (74), Expect = 0.28
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 ASVILRDIARARENIQKSLAGSS-------GPGASS----GTSGDHGELVVRIASLE--- 88
ASV+ RD + R + L + PGA+S G+ G+ G + ++ +E
Sbjct: 2199 ASVLERDSEQQRLQDELELTRRALEKERLHSPGATSTAELGSRGEQGVQLGEVSGVEAEP 2258
Query: 89 ----VENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQ 130
+E QS R ++ LQQA+++LE + L++ + R+T Q +
Sbjct: 2259 SPDGMEKQSWRQRLEHLQQAVARLEIDRSRLQRHNVQLRSTLEQVE 2304
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 36.2 bits (82), Expect = 0.033
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 34 AGASRQENGASVILRDIARARENIQKSLAG----SSGPGASSGTSGDHGELVVRIASLEV 89
+G R +N + ++ A+A +N Q++LAG S GPG +S S H + +IA+ +
Sbjct: 351 SGQPRADNPSPNLMPASAQA-QNAQRALAGVVLPSQGPGGASELSSAHQ--LQQIAAKQK 407
Query: 90 ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 149
Q L Q QQA +PG +T QT V P +KPA+P+
Sbjct: 408 REQML----QNPQQATPA----------PAPGQMSTWQQTGPSHSSLDVPYPMEKPASPS 453
Query: 150 EDDED 154
+D
Sbjct: 454 SYKQD 458
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 35.8 bits (81), Expect = 0.043
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 75 GDHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSP 134
G + +L+ R + +EN L G + EL++ +++L+ + + +E+ P R A + +
Sbjct: 1117 GAYSDLLQRQKATVLENSKLTGKISELERMVAELKKQKSRVEEELPKVREAA-ENELRKQ 1175
Query: 135 MRQVEPPAKKPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREERLRQYA-EKKAKKPAL 192
R VE + + + + +L + +KEAA+ ER+RQ E +AK+ A+
Sbjct: 1176 QRNVEDISLQKIRAESEAKQYRREL---ETIVREKEAAERELERVRQLTIEAEAKRAAV 1231
>gi|91825557 kinesin light chain 3 [Homo sapiens]
Length = 504
Score = 35.4 bits (80), Expect = 0.056
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 80 LVVRIASLEVENQSLRGVVQELQQA-------ISKLEARLNVLEKSSPGHRATAPQTQHV 132
L + +LE E Q LR + L Q + + + RL E+S + +
Sbjct: 91 LSAHVGALEAEKQRLRSQARRLAQENVWLREELEETQRRLRASEESVAQLEEEKRHLEFL 150
Query: 133 SPMRQVEPPAKKPATPAEDDEDDDIDLFGSDNEE 166
+RQ +PPA+ + + D LF S+ EE
Sbjct: 151 GQLRQYDPPAESQQSESPPRRDSLASLFPSEEEE 184
>gi|228008351 coiled-coil domain containing 48 [Homo sapiens]
Length = 598
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 76 DHGELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSP 134
D G R+A LE EN SLR +V++L+ A+ +AR L+ +A+ + H P
Sbjct: 192 DSGPDCERVARLEEENSSLRELVEDLRAALQSSDARCLALQVGLWKSQASTHEMGHGGP 250
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2369 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2425
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2426 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2485
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2486 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2545
Query: 190 PALVA 194
LVA
Sbjct: 2546 QRLVA 2550
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2373 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2429
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2430 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2489
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2490 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2549
Query: 190 PALVA 194
LVA
Sbjct: 2550 QRLVA 2554
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2369 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2425
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2426 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2485
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2486 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2545
Query: 190 PALVA 194
LVA
Sbjct: 2546 QRLVA 2550
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2337 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2393
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2394 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2453
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2454 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2513
Query: 190 PALVA 194
LVA
Sbjct: 2514 QRLVA 2518
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2506 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2562
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2563 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2622
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2623 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2682
Query: 190 PALVA 194
LVA
Sbjct: 2683 QRLVA 2687
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2347 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2403
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2404 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2463
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2464 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2523
Query: 190 PALVA 194
LVA
Sbjct: 2524 QRLVA 2528
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2355 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2411
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2412 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2471
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2472 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2531
Query: 190 PALVA 194
LVA
Sbjct: 2532 QRLVA 2536
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 34.3 bits (77), Expect = 0.13
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 20 DAERRFYEQMNGPVAGASRQENGASVILRDIARARENIQKSLAGSSGPGAS-SGTSGDHG 78
+AER+ +M+ A A R + + + R ARA E+ Q+ + G T
Sbjct: 2396 EAERQRQLEMS---AEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQ 2452
Query: 79 ELVVRIASLEVENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQV 138
E V + +LE++ Q + L++AI++LE L++ + + + + Q V + +
Sbjct: 2453 EKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQTVQQEQLL 2512
Query: 139 -EPPAKKPATPAEDDEDDDIDLFGSDN--------EEEDKEAAQLREERLRQYAEKKAKK 189
E A + + +E D + F ++E +A QLREE+ RQ + + ++
Sbjct: 2513 QETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQER 2572
Query: 190 PALVA 194
LVA
Sbjct: 2573 QRLVA 2577
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 33.9 bits (76), Expect = 0.16
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 90 ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 149
E R ++ +LQ IS E + + E SS + + + + + E + +
Sbjct: 243 EKMEERDLLSDLQD-ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEE 301
Query: 150 EDDEDDDIDLFGSDNEEEDKEAA-QLREERLRQYAEKKAKKPALVAKSS 197
E++E+++ + GS++EE +++A ++ EE + + E++ + LV S
Sbjct: 302 EEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPES 350
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 33.9 bits (76), Expect = 0.16
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 90 ENQSLRGVVQELQQAISKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPATPA 149
E R ++ +LQ IS E + + E SS + + + + + E + +
Sbjct: 253 EKMEERDLLSDLQD-ISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEE 311
Query: 150 EDDEDDDIDLFGSDNEEEDKEAA-QLREERLRQYAEKKAKKPALVAKSS 197
E++E+++ + GS++EE +++A ++ EE + + E++ + LV S
Sbjct: 312 EEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPES 360
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,678,268
Number of Sequences: 37866
Number of extensions: 488703
Number of successful extensions: 4599
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 3962
Number of HSP's gapped (non-prelim): 750
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.