Guide to the Human Genome
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Name: ZNF671 Sequence: fasta or formatted (534aa) NCBI GI: 190610006
Description:

zinc finger protein 671

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         28           2
 C cysteine            5.2         28           1
 D aspartate           3.6         19           2
 E glutamate           7.9         42           2
 F phenylalanine       4.7         25           2
 G glycine             7.9         42           2
 H histidine           5.8         31           1
 I isoleucine          2.4         13           1
 K lysine              6.6         35           1
 L leucine             7.9         42           2
 M methionine          1.5          8           1
 N asparagine          1.3          7           1
 P proline             3.9         21           1
 Q glutamine           4.9         26           1
 R arginine            8.8         47           2
 S serine              8.6         46           2
 T threonine           4.3         23           1
 V valine              5.6         30           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 671 
ZNF772                0.459   zinc finger protein 772 isoform 1 
ZNF792                0.456   zinc finger protein 792 
ZNF772                0.416   zinc finger protein 772 isoform 2 
ZNF530                0.398   zinc finger protein 530 
ZNF419                0.389   zinc finger protein 419 isoform 4 
ZNF548                0.389   zinc finger protein 548 
ZNF419                0.387   zinc finger protein 419 isoform 2 
ZNF134                0.387   zinc finger protein 134 
ZNF211                0.386   zinc finger protein 211 isoform 2 
ZNF132                0.385   zinc finger protein 132 
ZNF773                0.385   zinc finger protein 773 
ZNF419                0.384   zinc finger protein 419 isoform 3 
ZNF419                0.384   zinc finger protein 419 isoform 1 
ZNF17                 0.382   zinc finger protein 17 
ZNF211                0.382   zinc finger protein 211 isoform 1 
ZIK1                  0.381   zinc finger protein interacting with K protein 1 [Ho...
ZNF418                0.380   zinc finger protein 418 
ZNF416                0.378   zinc finger protein 416 
ZNF256                0.378   zinc finger protein 256 
ZNF304                0.375   zinc finger protein 304 
LOC100293516          0.349   PREDICTED: similar to zinc finger protein 587 [Homo...
ZNF814                0.349   zinc finger protein 814 
LOC100288322          0.346   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.346   PREDICTED: hypothetical protein XP_002343703 
ZNF568                0.345   zinc finger protein 568 
ZNF436                0.339   zinc finger protein 436 
ZNF436                0.339   zinc finger protein 436 
ZNF569                0.337   zinc finger protein 569 
ZNF34                 0.337   zinc finger protein 34 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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