Search of human proteins with 190570192

Search of human proteins with 190570192

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190570192 SPANX family, member F1 [Homo sapiens]
         (103 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190570192 SPANX family, member F1 [Homo sapiens]                   208   6e-55
gi|14196344 SPANX family, member B1 [Homo sapiens]                    207   1e-54
gi|22027492 sperm protein associated with the nucleus, X chromos...   207   1e-54
gi|13435137 sperm protein associated with the nucleus, X chromos...   162   7e-41
gi|14192937 sperm protein associated with the nucleus, X chromos...   158   1e-39
gi|22027489 sperm protein associated with the nucleus, X chromos...   158   1e-39
gi|22027496 SPANX family, member E [Homo sapiens]                     149   4e-37
gi|14192939 SPANX family, member D [Homo sapiens]                     146   4e-36
gi|57634514 SPANX-N2 protein [Homo sapiens]                            60   5e-10
gi|58801563 SPANX-N3 protein [Homo sapiens]                            58   1e-09
gi|57528121 SPANX-N1 protein [Homo sapiens]                            57   4e-09
gi|57528144 SPANX family, member N5 [Homo sapiens]                     52   8e-08
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa...    35   0.013
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    32   0.11 
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    32   0.11 
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]                31   0.18 
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]           30   0.41 
gi|47578107 delangin isoform B [Homo sapiens]                          29   0.70 
gi|47578105 delangin isoform A [Homo sapiens]                          29   0.70 
gi|40254823 SH2 containing inositol phosphatase isoform b [Homo ...    29   0.70 
gi|64085167 SH2 containing inositol phosphatase isoform a [Homo ...    29   0.70 
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    28   1.2  
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    28   1.2  
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    28   1.2  
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...    28   1.2  
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r...    28   1.2  
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r...    28   1.2  
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re...    28   1.2  
gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Ho...    28   1.6  
gi|71274152 hypothetical protein LOC388939 [Homo sapiens]              28   1.6  

>gi|190570192 SPANX family, member F1 [Homo sapiens]
          Length = 103

 Score =  208 bits (530), Expect = 6e-55
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK
Sbjct: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103


>gi|14196344 SPANX family, member B1 [Homo sapiens]
          Length = 103

 Score =  207 bits (527), Expect = 1e-54
 Identities = 102/103 (99%), Positives = 103/103 (100%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRNVKRTSPEEL+NDHARENRINPDQMEEEEFIEITTERPKK
Sbjct: 61  YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK 103


>gi|22027492 sperm protein associated with the nucleus, X
           chromosome, family member B2 [Homo sapiens]
          Length = 103

 Score =  207 bits (527), Expect = 1e-54
 Identities = 102/103 (99%), Positives = 103/103 (100%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRNVKRTSPEEL+NDHARENRINPDQMEEEEFIEITTERPKK
Sbjct: 61  YRRNVKRTSPEELVNDHARENRINPDQMEEEEFIEITTERPKK 103


>gi|13435137 sperm protein associated with the nucleus, X
           chromosome, family member C [Homo sapiens]
          Length = 97

 Score =  162 bits (409), Expect = 7e-41
 Identities = 84/103 (81%), Positives = 87/103 (84%), Gaps = 6/103 (5%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           M +QSS   +KRSVPCESNE NE      TMPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MDKQSSAGGVKRSVPCESNEVNE------TMPETPTGDSDPQPAPKKMKTSESSTILVVR 54

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRNVKRTSPEELLNDHARENRINP QMEEEEF+EI  E P K
Sbjct: 55  YRRNVKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|14192937 sperm protein associated with the nucleus, X
           chromosome, family member A1 [Homo sapiens]
          Length = 97

 Score =  158 bits (399), Expect = 1e-39
 Identities = 82/103 (79%), Positives = 86/103 (83%), Gaps = 6/103 (5%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           M +QSS   +KRSVPC+SNEANE       MPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MDKQSSAGGVKRSVPCDSNEANEM------MPETPTGDSDPQPAPKKMKTSESSTILVVR 54

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRN KRTSPEELLNDHARENRINP QMEEEEF+EI  E P K
Sbjct: 55  YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|22027489 sperm protein associated with the nucleus, X
           chromosome, family member A2 [Homo sapiens]
          Length = 97

 Score =  158 bits (399), Expect = 1e-39
 Identities = 82/103 (79%), Positives = 86/103 (83%), Gaps = 6/103 (5%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           M +QSS   +KRSVPC+SNEANE       MPETPTGDSDPQPAPKKMKTSESSTILVVR
Sbjct: 1   MDKQSSAGGVKRSVPCDSNEANEM------MPETPTGDSDPQPAPKKMKTSESSTILVVR 54

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRN KRTSPEELLNDHARENRINP QMEEEEF+EI  E P K
Sbjct: 55  YRRNFKRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|22027496 SPANX family, member E [Homo sapiens]
          Length = 97

 Score =  149 bits (377), Expect = 4e-37
 Identities = 78/103 (75%), Positives = 85/103 (82%), Gaps = 6/103 (5%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           M +QSS   +KRSVPC+SNEANE       MPET +G SDPQPAPKK+KTSESSTILVVR
Sbjct: 1   MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR 54

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRNVKRTSPEEL+NDHARENRINP QMEEEEF+EI  E P K
Sbjct: 55  YRRNVKRTSPEELVNDHARENRINPLQMEEEEFMEIMVEIPAK 97


>gi|14192939 SPANX family, member D [Homo sapiens]
          Length = 97

 Score =  146 bits (368), Expect = 4e-36
 Identities = 76/103 (73%), Positives = 84/103 (81%), Gaps = 6/103 (5%)

Query: 1   MGQQSSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVR 60
           M +QSS   +KRSVPC+SNEANE       MPET +G SDPQPAPKK+KTSESSTILVVR
Sbjct: 1   MDKQSSAGGVKRSVPCDSNEANEM------MPETSSGYSDPQPAPKKLKTSESSTILVVR 54

Query: 61  YRRNVKRTSPEELLNDHARENRINPDQMEEEEFIEITTERPKK 103
           YRRN KRTSPEEL+NDHAR+NRINP QMEEEEF+EI  E P K
Sbjct: 55  YRRNFKRTSPEELVNDHARKNRINPLQMEEEEFMEIMVEIPAK 97


>gi|57634514 SPANX-N2 protein [Homo sapiens]
          Length = 180

 Score = 59.7 bits (143), Expect = 5e-10
 Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 5  SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
          SS    KR  PCESN     N+ N  M E P     P+ + +K KT E  TI+V  YR++
Sbjct: 6  SSTNGEKRKSPCESN-----NKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH 60

Query: 65 VKRTSPEELLNDHARENRINPDQMEEEEFIE 95
           K  S  +L  D +REN INP Q EE+E ++
Sbjct: 61 TKINS-NQLEKDQSRENSINPVQEEEDEGLD 90


>gi|58801563 SPANX-N3 protein [Homo sapiens]
          Length = 141

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 5  SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
          SS    K   PCESN     N+ N  M E P     P+ + KK KTSE   I+ V Y R 
Sbjct: 6  SSTNGEKTKSPCESN-----NKKNDEMQEVPNRVLAPEQSLKKTKTSEYP-IIFVYYLRK 59

Query: 65 VKRTSPEELLNDHARENRINPDQMEEEEFIEIT 97
           K+ +  +L N+ ++EN INP Q EE+E ++++
Sbjct: 60 GKKINSNQLENEQSQENSINPIQKEEDEGVDLS 92


>gi|57528121 SPANX-N1 protein [Homo sapiens]
          Length = 72

 Score = 56.6 bits (135), Expect = 4e-09
 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 5  SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
          SS+   KR  PCESN  N+       M ETP  D  P+P+ KKMKTSE ST+L   YR+ 
Sbjct: 6  SSINGEKRKSPCESNNENDE------MQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRK- 58

Query: 65 VKRTSPEELLNDHA 78
           K+    +L ND +
Sbjct: 59 AKKIHSNQLENDQS 72


>gi|57528144 SPANX family, member N5 [Homo sapiens]
          Length = 72

 Score = 52.4 bits (124), Expect = 8e-08
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 5  SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
          SS    KR  PC+SN  N+       M ETP  D   +P+ KKMKTSE ST+LV+ YR+ 
Sbjct: 6  SSTNGEKRKSPCDSNSKNDE------MQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK- 58

Query: 65 VKRTSPEELLNDHA 78
           K+    +L ND +
Sbjct: 59 TKKIHSNQLENDQS 72


>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
           sapiens]
          Length = 2997

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 5   SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
           S    LK+ V     E +E ++ +KT P +P  + D  P  +K ++S    +   RY  +
Sbjct: 705 SEASALKKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQ--VKRKRYTED 762

Query: 65  VKRTSPEELLND---HARENRINPDQMEEEEFIE 95
           ++    +E  +D     R++  N  Q E++E ++
Sbjct: 763 LEFKISDEEADDADAAGRDSPSNTSQSEQQESVD 796


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 15  PCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELL 74
           P E   A+EA  A    P  P+  + P   PK+ K  E++    V      K  + EEL 
Sbjct: 776 PTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELA 835

Query: 75  NDHAR-ENRINPDQMEEEE 92
            D  + E  +  +  EE E
Sbjct: 836 VDTGKAEEPVKSECTEEAE 854


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 15  PCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELL 74
           P E   A+EA  A    P  P+  + P   PK+ K  E++    V      K  + EEL 
Sbjct: 793 PTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELA 852

Query: 75  NDHAR-ENRINPDQMEEEE 92
            D  + E  +  +  EE E
Sbjct: 853 VDTGKAEEPVKSECTEEAE 871


>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
          Length = 600

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 9   RLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRT 68
           ++K++ P    EA + ++      +TP+G + P   P K++   + +I      R VK  
Sbjct: 270 KVKKNEPLHEKEAKDDSKTKTPEKQTPSGPTKPSEGPAKVEEEAAPSIFDEPLER-VKNN 328

Query: 69  SPE 71
            PE
Sbjct: 329 DPE 331


>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
          Length = 582

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 53  SSTILVVRYRRNVKRTSPEELLNDHARENRINPDQMEEEEFIE 95
           ++ I+  RY R VK  +P E+  DH+++ +I  D+ +EE+  E
Sbjct: 454 NNPIVKARYERFVKGENPFEI-QDHSQDQQIEGDEEDEEKIDE 495


>gi|47578107 delangin isoform B [Homo sapiens]
          Length = 2697

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 9   RLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKT 50
           RL  + P ++ + N  +E  K+ PETP    + +P   K K+
Sbjct: 677 RLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKS 718



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 15/72 (20%)

Query: 32  PETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDHARENRINPDQMEEE 91
           PETP   SDP+ +  +MK SES        R    + +   L+   + EN++       E
Sbjct: 597 PETPKKKSDPELSKSEMKQSES--------RLAESKPNENRLVETKSSENKL-------E 641

Query: 92  EFIEITTERPKK 103
             +E  TE  K+
Sbjct: 642 TKVETQTEELKQ 653


>gi|47578105 delangin isoform A [Homo sapiens]
          Length = 2804

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 9   RLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKT 50
           RL  + P ++ + N  +E  K+ PETP    + +P   K K+
Sbjct: 677 RLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKS 718



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 15/72 (20%)

Query: 32  PETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDHARENRINPDQMEEE 91
           PETP   SDP+ +  +MK SES        R    + +   L+   + EN++       E
Sbjct: 597 PETPKKKSDPELSKSEMKQSES--------RLAESKPNENRLVETKSSENKL-------E 641

Query: 92  EFIEITTERPKK 103
             +E  TE  K+
Sbjct: 642 TKVETQTEELKQ 653


>gi|40254823 SH2 containing inositol phosphatase isoform b [Homo
            sapiens]
          Length = 1188

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 2    GQQSSVRRLKRSVPCESNEANEANEANKTM--PETPTGDSDPQPAPKKMKTSES 53
            G+Q    RL RS  C S+    A   +K+   P+TP     P PA + +K S S
Sbjct: 1074 GKQVPAPRL-RSFTCSSSAEGRAAGGDKSQGKPKTPVSSQAPVPAKRPIKPSRS 1126


>gi|64085167 SH2 containing inositol phosphatase isoform a [Homo
            sapiens]
          Length = 1189

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 2    GQQSSVRRLKRSVPCESNEANEANEANKTM--PETPTGDSDPQPAPKKMKTSES 53
            G+Q    RL RS  C S+    A   +K+   P+TP     P PA + +K S S
Sbjct: 1075 GKQVPAPRL-RSFTCSSSAEGRAAGGDKSQGKPKTPVSSQAPVPAKRPIKPSRS 1127


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 18  SNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDH 77
           +N A   +   K +P  PTG   P PAP  +  + +S ++  + +   +   P  ++  H
Sbjct: 290 ANAAAPTSTPQKLIPPQPTG--RPSPAPPAVPPA-ASPVMPPQTQSPGQPAQPAPMVPLH 346

Query: 78  ARENRINPDQMEEE-EFIEITTER 100
            +++RI P Q     + +EI  ER
Sbjct: 347 QKQSRITPIQKPRGLDPVEILQER 370


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 18  SNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDH 77
           +N A   +   K +P  PTG   P PAP  +  + +S ++  + +   +   P  ++  H
Sbjct: 290 ANAAAPTSTPQKLIPPQPTG--RPSPAPPAVPPA-ASPVMPPQTQSPGQPAQPAPMVPLH 346

Query: 78  ARENRINPDQMEEE-EFIEITTER 100
            +++RI P Q     + +EI  ER
Sbjct: 347 QKQSRITPIQKPRGLDPVEILQER 370


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 18  SNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDH 77
           +N A   +   K +P  PTG   P PAP  +  + +S ++  + +   +   P  ++  H
Sbjct: 290 ANAAAPTSTPQKLIPPQPTG--RPSPAPPAVPPA-ASPVMPPQTQSPGQPAQPAPMVPLH 346

Query: 78  ARENRINPDQMEEE-EFIEITTER 100
            +++RI P Q     + +EI  ER
Sbjct: 347 QKQSRITPIQKPRGLDPVEILQER 370


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 18  SNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDH 77
           +N A   +   K +P  PTG   P PAP  +  + +S ++  + +   +   P  ++  H
Sbjct: 290 ANAAAPTSTPQKLIPPQPTG--RPSPAPPAVPPA-ASPVMPPQTQSPGQPAQPAPMVPLH 346

Query: 78  ARENRINPDQMEEE-EFIEITTER 100
            +++RI P Q     + +EI  ER
Sbjct: 347 QKQSRITPIQKPRGLDPVEILQER 370


>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform C [Homo sapiens]
          Length = 1617

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 18  SNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDH 77
           +N A   +   K +P  PTG   P PAP  +  + +S ++  + +   +   P  ++  H
Sbjct: 290 ANAAAPTSTPQKLIPPQPTG--RPSPAPPAVPPA-ASPVMPPQTQSPGQPAQPAPMVPLH 346

Query: 78  ARENRINPDQMEEE-EFIEITTER 100
            +++RI P Q     + +EI  ER
Sbjct: 347 QKQSRITPIQKPRGLDPVEILQER 370


>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 18  SNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDH 77
           +N A   +   K +P  PTG   P PAP  +  + +S ++  + +   +   P  ++  H
Sbjct: 290 ANAAAPTSTPQKLIPPQPTG--RPSPAPPAVPPA-ASPVMPPQTQSPGQPAQPAPMVPLH 346

Query: 78  ARENRINPDQMEEE-EFIEITTER 100
            +++RI P Q     + +EI  ER
Sbjct: 347 QKQSRITPIQKPRGLDPVEILQER 370


>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 18  SNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEELLNDH 77
           +N A   +   K +P  PTG   P PAP  +  + +S ++  + +   +   P  ++  H
Sbjct: 290 ANAAAPTSTPQKLIPPQPTG--RPSPAPPAVPPA-ASPVMPPQTQSPGQPAQPAPMVPLH 346

Query: 78  ARENRINPDQMEEE-EFIEITTER 100
            +++RI P Q     + +EI  ER
Sbjct: 347 QKQSRITPIQKPRGLDPVEILQER 370


>gi|31317272 WD repeat and FYVE domain containing 3 isoform 1 [Homo
            sapiens]
          Length = 3526

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 15/89 (16%)

Query: 14   VPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSPEEL 73
            VP    E N A+E     PETP  D  PQ  P              RYRR V   S E  
Sbjct: 2397 VPETEQETNVASEIPSKQPETP--DDIPQKKP-------------ARYRRAVSYDSKEYY 2441

Query: 74   LNDHARENRINPDQMEEEEFIEITTERPK 102
            +   +    I  D + E    E   + P+
Sbjct: 2442 MRLASGNPAIVQDAIVESSEGEAAQQEPE 2470


>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
          Length = 1288

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 14  VPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTIL 57
           VPC   + +E  E    +P  P+  S  + AP++   S+S + L
Sbjct: 557 VPCGHQDWSEEEEGRTVVPPRPSTVSGSRRAPERQTRSQSESCL 600


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.304    0.121    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,200,901
Number of Sequences: 37866
Number of extensions: 176155
Number of successful extensions: 760
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 673
Number of HSP's gapped (non-prelim): 113
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.