CACNA1C 10779

Name: CACNA1C	Sequence: fasta or formatted (2221aa)		NCBI GI: 193788720
Description: calcium channel, voltage-dependent, L type, alpha 1C subunit isoform 1		Referenced in: Calcium and TRP Cation Channels Gene Families and the Nervous System
Other entries for this name: alt prot [2138aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2158aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2157aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2157aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2146aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2146aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2138aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2138aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2138aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2138aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2135aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2127aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2186aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2179aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2173aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2166aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2157aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2155aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof... alt prot [2144aa] calcium channel, voltage-dependent, L type, alpha 1C subunit isof...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 171 3 C cysteine 2.0 44 1 D aspartate 4.1 92 2 E glutamate 6.7 148 5 F phenylalanine 5.9 130 2 G glycine 6.1 135 4 H histidine 1.9 42 2 I isoleucine 7.0 155 4 K lysine 4.6 103 2 L leucine 10.2 227 5 M methionine 2.4 54 2 N asparagine 4.9 108 3 P proline 5.0 111 2 Q glutamine 3.7 82 2 R arginine 5.5 122 2 S serine 7.2 159 2 T threonine 5.2 115 2 V valine 6.1 136 3 W tryptophan 1.3 28 1 Y tyrosine 2.7 59 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.980 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.973 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.969 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.964 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.958 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.952 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.952 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.950 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.949 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.949 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.948 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.948 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.946 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.945 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.945 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.944 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.942 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.942 calcium channel, voltage-dependent, L type, alpha 1... CACNA1C 0.941 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.612 calcium channel, voltage-dependent, L type, alpha 1... CACNA1D 0.612 calcium channel, voltage-dependent, L type, alpha 1D ... CACNA1D 0.611 calcium channel, voltage-dependent, L type, alpha 1... CACNA1S 0.512 calcium channel, voltage-dependent, L type, alpha 1... CACNA1F 0.492 calcium channel, voltage-dependent, L type, alpha 1F... CACNA1A 0.165 calcium channel, alpha 1A subunit isoform 3 CACNA1A 0.163 calcium channel, alpha 1A subunit isoform 4 CACNA1B 0.163 calcium channel, voltage-dependent, N type, alpha 1B ... CACNA1E 0.158 calcium channel, voltage-dependent, R type, alpha 1E... SCN9A 0.067 sodium channel, voltage-gated, type IX, alpha Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.