Guide to the Human Genome
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Search of human proteins with 190358493

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo
sapiens]
         (519 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens]  1058   0.0  
gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens]   1058   0.0  
gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens]   992   0.0  
gi|207113133 hypothetical protein LOC729085 [Homo sapiens]            244   1e-64
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              35   0.13 
gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]            34   0.28 
gi|168229150 poly(A) binding protein, cytoplasmic 4-like [Homo s...    34   0.37 
gi|146219832 myosin light chain kinase 3 [Homo sapiens]                33   0.63 
gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Hom...    33   0.82 
gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo ...    33   0.82 
gi|4502175 apical protein of Xenopus-like [Homo sapiens]               32   1.1  
gi|113416229 PREDICTED: hypothetical protein [Homo sapiens]            32   1.8  
gi|41281612 zinc finger protein 828 [Homo sapiens]                     32   1.8  
gi|27881484 zinc finger CCCH-type containing 7B [Homo sapiens]         32   1.8  
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H...    31   2.4  
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ...    31   3.1  
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]    31   3.1  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    30   4.1  
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ...    30   4.1  
gi|150170729 microtubule associated serine/threonine kinase 3 [H...    30   4.1  
gi|17998698 GATA binding protein 5 [Homo sapiens]                      30   4.1  
gi|241896898 family with sequence similarity 20, member A [Homo ...    30   5.3  
gi|153070260 myristoylated alanine-rich protein kinase C substra...    30   5.3  
gi|116256471 SNF1-like kinase [Homo sapiens]                           30   5.3  
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]            30   7.0  
gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo ...    30   7.0  
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             30   7.0  
gi|18765711 four jointed box 1 [Homo sapiens]                          30   7.0  
gi|222418771 glycerate kinase isoform 2 [Homo sapiens]                 29   9.1  
gi|14670366 POZ (BTB) and AT hook containing zinc finger 1 long ...    29   9.1  

>gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
          Length = 519

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 519/519 (100%), Positives = 519/519 (100%)

Query: 1   MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
           MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL
Sbjct: 1   MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60

Query: 61  QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
           QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN
Sbjct: 61  QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120

Query: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
           IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW
Sbjct: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180

Query: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
           RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS
Sbjct: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240

Query: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
           RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE
Sbjct: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300

Query: 301 FIQDGRPCPIILWDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIH 360
           FIQDGRPCPIILWDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIH
Sbjct: 301 FIQDGRPCPIILWDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIH 360

Query: 361 HHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKH 420
           HHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKH
Sbjct: 361 HHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKH 420

Query: 421 DPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYW 480
           DPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYW
Sbjct: 421 DPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYW 480

Query: 481 ESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 519
           ESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE
Sbjct: 481 ESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 519


>gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
          Length = 519

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 519/519 (100%), Positives = 519/519 (100%)

Query: 1   MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
           MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL
Sbjct: 1   MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60

Query: 61  QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
           QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN
Sbjct: 61  QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120

Query: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
           IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW
Sbjct: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180

Query: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
           RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS
Sbjct: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240

Query: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
           RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE
Sbjct: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300

Query: 301 FIQDGRPCPIILWDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIH 360
           FIQDGRPCPIILWDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIH
Sbjct: 301 FIQDGRPCPIILWDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIH 360

Query: 361 HHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKH 420
           HHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKH
Sbjct: 361 HHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKH 420

Query: 421 DPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYW 480
           DPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYW
Sbjct: 421 DPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYW 480

Query: 481 ESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 519
           ESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE
Sbjct: 481 ESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 519


>gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens]
          Length = 527

 Score =  992 bits (2564), Expect = 0.0
 Identities = 494/528 (93%), Positives = 499/528 (94%), Gaps = 10/528 (1%)

Query: 1   MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
           MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL
Sbjct: 1   MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60

Query: 61  QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
           QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN
Sbjct: 61  QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120

Query: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
           IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW
Sbjct: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180

Query: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
           RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS
Sbjct: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240

Query: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
           RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE
Sbjct: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300

Query: 301 FIQDGRPCPIIL---------WDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPK 351
           FIQ      + +         W+  +           +LTWGTYQQLLKQKCWQNGRVPK
Sbjct: 301 FIQAAAAACLSMRLAFFIFPAWE-DMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPK 359

Query: 352 PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA 411
           PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA
Sbjct: 360 PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA 419

Query: 412 LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ 471
           LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ
Sbjct: 420 LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ 479

Query: 472 SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 519
           SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE
Sbjct: 480 SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 527


>gi|207113133 hypothetical protein LOC729085 [Homo sapiens]
          Length = 575

 Score =  244 bits (624), Expect = 1e-64
 Identities = 130/316 (41%), Positives = 180/316 (56%), Gaps = 20/316 (6%)

Query: 212 APSWLSKDDIRRMRLLADSAVAGLRPVSSRS-------GARLLVLEGGAPGAVLRCGPSP 264
           AP WL+  D++ +RLLA   V     V +              + +  +P     C    
Sbjct: 257 APPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAALQDLSSPRLSQLCSQGL 316

Query: 265 CGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEF------IQDGRPCPIILW--DAS 316
           CGL+K+P D+ EV +FH+DR+LGL R+LP+V+R+           DG   P+I W  D  
Sbjct: 317 CGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRYTDGGARPVIWWAPDVQ 376

Query: 317 LSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQI 376
             S  ++  +S+ L W  YQ LL   C   G+ P     C  IHH EW+++ALFDFLLQ+
Sbjct: 377 HLSDPDEDQNSLALGWLQYQALLAHSCNWPGQAP-----CPGIHHTEWARLALFDFLLQV 431

Query: 377 YNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKGFFDR 436
           ++RLD  CCGF P   D CV+  LR KC +     L HI+ R  DP HLV+IDN G    
Sbjct: 432 HDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQH 491

Query: 437 SEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEKLIDVI 496
            ED LNF+LLEGI  FP SAV VL S  L+  LL+SL +D V+WESQGG QG+++++  +
Sbjct: 492 PEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGGAQGLKQVLQTL 551

Query: 497 EHRAKILITYINAHGV 512
           E R ++L+ +I  H +
Sbjct: 552 EQRGQVLLGHIQKHNL 567


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 20/122 (16%)

Query: 51  LVSQVGRASLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYIT 110
           LV QVGR      +    GPHRS   ++P        GT    E+Q   S   P   ++ 
Sbjct: 806 LVLQVGRP-----EQGAVGPHRSHCCSQP--------GTQPAQEAQRGPS---PEASWLC 849

Query: 111 LRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAARE-ADAVAPGYAQG 169
            R   + P   RG   P+RR     ++ +  Q    GP   PQE  R+     +PG   G
Sbjct: 850 GRYCPTPP---RGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSG 906

Query: 170 AN 171
           A+
Sbjct: 907 AS 908


>gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 294

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 113 SKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAA 156
           +K+ + A   GT  P+RR++ A  +A  GQ+A  G SL P   A
Sbjct: 202 AKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLTPNSLA 245


>gi|168229150 poly(A) binding protein, cytoplasmic 4-like [Homo
           sapiens]
          Length = 370

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 17/101 (16%)

Query: 405 DDQGSAALAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQH 464
           DDQGS   A            V   N+   DR+ + +N KLL+G K F    V   K++ 
Sbjct: 132 DDQGSKGYA-----------FVHFQNQSAADRAIEEMNGKLLKGCKVF----VGRFKNRK 176

Query: 465 LRQKLLQSLFLD--KVYWESQGGRQGIEKLIDVIEHRAKIL 503
            R+  L+S   +   VY ++ GG    E+L DV     K L
Sbjct: 177 DREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTL 217


>gi|146219832 myosin light chain kinase 3 [Homo sapiens]
          Length = 819

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 14/70 (20%)

Query: 139 APGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW----RLVRGPGVRAGGPD 194
           APG+  +V PSL+          VAPG  QGA+  +    P     RL  GPG +  GP 
Sbjct: 267 APGRVNVVSPSLE----------VAPGAGQGASSSRPDPEPLEEGTRLTPGPGPQCPGPP 316

Query: 195 FLQPSSRESN 204
            L   +R ++
Sbjct: 317 GLPAQARATH 326


>gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Homo
           sapiens]
          Length = 1134

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 11/85 (12%)

Query: 111 LRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQ----PQEAAREADAVAPGY 166
           L+ K + P +  G +  +       A++AP + A VGP +Q    P+  +R    V P  
Sbjct: 325 LQQKENLPVSSDGNLPQQ-------AASAPSRVAAVGPYIQSSTMPRMPSRPELLVKPAL 377

Query: 167 AQGANLVKIGERPWRLVRGPGVRAG 191
             G+ +++  E P ++   P +R+G
Sbjct: 378 PDGSLVIQASEGPMKIQTLPNMRSG 402


>gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo
           sapiens]
          Length = 1005

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 11/85 (12%)

Query: 111 LRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQ----PQEAAREADAVAPGY 166
           L+ K + P +  G +  +       A++AP + A VGP +Q    P+  +R    V P  
Sbjct: 196 LQQKENLPVSSDGNLPQQ-------AASAPSRVAAVGPYIQSSTMPRMPSRPELLVKPAL 248

Query: 167 AQGANLVKIGERPWRLVRGPGVRAG 191
             G+ +++  E P ++   P +R+G
Sbjct: 249 PDGSLVIQASEGPMKIQTLPNMRSG 273


>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
          Length = 1616

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 44/177 (24%), Positives = 63/177 (35%), Gaps = 23/177 (12%)

Query: 70  PHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPANIRGTVKPKR 129
           P    D+ +   PE   +  LA P     G      V Y+    K+  P++      P R
Sbjct: 270 PRVPGDSGKGPRPEYNAEPKLAAPGRSNFGP-----VWYVP--DKKKAPSSPPPPPPPLR 322

Query: 130 RKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPWRLVR--GPG 187
               A   A    E   GP      AA+   A+A    +G    ++ +RPWR       G
Sbjct: 323 SDSFA---ATKSHEKAQGPVFSEAAAAQHFTALAQAQPRGDRRPELTDRPWRSAHPGSLG 379

Query: 188 VRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLR-PVSSRSG 243
             +GGP   Q +  +           SW    D    RL A  + + +R P S  SG
Sbjct: 380 KGSGGPGCPQEAHADG----------SWPPSKDGASSRLQASLSSSDVRFPQSPHSG 426


>gi|113416229 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 133 HAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERP 179
           H  + + P  +AL  P    QEAA  A A APG   G+ +   G RP
Sbjct: 113 HPGSGSVPLSQALQSPG--SQEAAAAAAAAAPGELSGSQVAAAGRRP 157


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 26/138 (18%)

Query: 82  PEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPANIRGTVKPK------RRKKHAV 135
           PE P    L P E Q  GS + P +       + SKPA++     PK       +K   V
Sbjct: 143 PESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPV 202

Query: 136 ASAAPGQEALVGP--------SLQPQEAAREADAVAPGYAQG--ANLVKIGERPWRLVRG 185
            S  P + A V P        + +PQ+ +   + + P  A    + ++     PW    G
Sbjct: 203 PSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPW----G 258

Query: 186 PGVRAGGPDFLQPSSRES 203
           P   A       P SR+S
Sbjct: 259 PSPAA------SPESRKS 270


>gi|27881484 zinc finger CCCH-type containing 7B [Homo sapiens]
          Length = 977

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 16/111 (14%)

Query: 315 ASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPKPESG---CTEIHHHEWSKMALFD 371
           AS S  +  TH     T+    + +  +CW+NG+V +P+     C+    H W+K     
Sbjct: 674 ASSSMGAPRTHGPS--TFDLQMKFVCGQCWRNGQVVEPDKDLKYCSAKARHCWTKERR-- 729

Query: 372 FLLQIYNRLDTNCCGFR--------PRKEDACVQNGLRPKCDDQGSAALAH 414
            +L + ++        R        P++ D C+      KC   G+ + AH
Sbjct: 730 -VLLVMSKAKRKWVSVRPLPSIRNFPQQYDLCIHAQNGRKCQYVGNCSFAH 779


>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
           sapiens]
          Length = 541

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 23/141 (16%)

Query: 106 VVYITLRSKRSKPANI--RGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVA 163
           ++Y+ L  +   P  +  R    P  R   AV      ++A  GP         ++D   
Sbjct: 20  LIYLGLLGEAGSPVVLAQRALETPALRSAAAVRRVGESEQAPAGP---------QSDRGR 70

Query: 164 PGYAQGANLVKIGERPWRLVRGPGVRAGGPDFLQPSS--RESNIR--IYSESAPSWLS-- 217
           PG      L    ER  R   GP  R GG  +LQ S   R+ N +    S+ APS  S  
Sbjct: 71  PGQVPDRCLRSGRERGSRSGPGPAERGGGGSWLQESGCVRDCNSQHTFLSDQAPSLKSSA 130

Query: 218 ------KDDIRRMRLLADSAV 232
                 +D  RRM + A+ ++
Sbjct: 131 IALAMLQDWCRRMGVNAERSL 151


>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
           sapiens]
          Length = 1119

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 49/182 (26%), Positives = 66/182 (36%), Gaps = 47/182 (25%)

Query: 52  VSQVGRASLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPP----------------ES 95
           V Q   A++  GQ A +G  ++R+T E + P +PLD  L  P                 S
Sbjct: 750 VHQEPGAAVPRGQEAPEG--KARETVE-NLPPLPLDPVLRAPGGRPAPSQDLNQRSLEHS 806

Query: 96  QG-----------NGSTLQPNVVYITLRSKRSKPA-NIRGTVKPKRRKKHAVASAAPGQE 143
           +G            G   +P      LR  +   A    GTVK   +    V    P +E
Sbjct: 807 EGPVGRDPAGPPDGGPDTEPRAAQAKLRDGQKDAAPRAAGTVKELPKGPEQVPVPDPARE 866

Query: 144 ALVGPSLQPQE---------AAREADAVAPGY---AQGANLVKIGERPWRLVRGPGVRAG 191
           A  GP  +  E              D   PG    A G +++K  E  W LV GPG   G
Sbjct: 867 A-GGPEERLAEEFPGQSQDVTGGSQDRKKPGKEVAATGTSILK--EANW-LVAGPGAETG 922

Query: 192 GP 193
            P
Sbjct: 923 DP 924


>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
          Length = 2608

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 10/124 (8%)

Query: 57  RASLQHGQAAEKGPHRSRDTAEPSFPEIPLDG---------TLAPPESQGNGSTLQPNVV 107
           R  + H  A+  GP     TA  SFP + L G           AP + + +G T  P+V 
Sbjct: 340 RRQMLHHTASYAGPPPPLSTAAGSFPCLQLHGGPDGLCPLQDKAPRDLKASGPTFVPSVG 399

Query: 108 YITLRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYA 167
           ++  + +  + A     V  + + +H   + AP   A  G S    +A  + +    G+ 
Sbjct: 400 HLADKGRPFQAAE-ACAVAGEGKDRHLEGTMAPDHAAPYGVSYAHLKAEGKGERRPGGFE 458

Query: 168 QGAN 171
              N
Sbjct: 459 AALN 462


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 56/222 (25%), Positives = 80/222 (36%), Gaps = 41/222 (18%)

Query: 67   EKGPHRSRDTAEPSFPEIPLDGTLAPPESQG---NGSTLQPNVVYITLRSKRSKPANIRG 123
            E+     R T  P+ P  P +G   PP +QG     S ++ ++ Y          A   G
Sbjct: 6834 EEAEASERSTEAPAPPASP-EGA-GPPAAQGCVPRHSVIR-SLFYHQAGESPEHGALAPG 6890

Query: 124  TVKPKRRKKHA-----VASAAPG-QEALVGPSLQPQEAAREADAV----APGYAQGANLV 173
            + +   R++H      +A A PG +E L+   +  +EAARE  A     AP +     L 
Sbjct: 6891 SRRHPARRRHLLKGGYIAGALPGLREPLMEHRVLEEEAAREEQATLLAKAPSFETALRLP 6950

Query: 174  KIGERPWRLVRGPG----VRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLAD 229
              G         PG    +    P   +PSS          SAPS               
Sbjct: 6951 ASGTH-----LAPGHSHSLEHDSPSTPRPSSEACGEAQRLPSAPS--------------- 6990

Query: 230  SAVAGLRPVSSRSGARLLVLEGGAPGAVLRCGPSPCGLLKQP 271
               A +R +    G++ L   GG PG      PSP     QP
Sbjct: 6991 -GGAPIRDMGHPQGSKQLPSTGGHPGTAQPERPSPDSPWGQP 7031


>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
           sapiens]
          Length = 909

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 53/209 (25%), Positives = 75/209 (35%), Gaps = 39/209 (18%)

Query: 39  LLGTACAIYLGFLVSQVGRASLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPES-QG 97
           LLG      +G  +   G   +Q G    +GP  SR        E PL     PPE+ +G
Sbjct: 693 LLGPEVPGAVGAALRGGGEVGIQEGGV--RGPPTSRPARAQGAQESPLPAPSEPPEAVEG 750

Query: 98  NGSTLQPNVVYITLRSKRSKP-ANIRGTVKPKRRKKHAVASAAP----GQEAL--VGPSL 150
             S  +            ++P   + G  +    ++ A  S  P    GQE L  + PS 
Sbjct: 751 KASPREQGE-----EGAPTQPCCGLAGGPQAGPTQQPAARSGHPNGEIGQEGLGKLVPSP 805

Query: 151 QPQEA-AREADAVAPGYAQGANLVKIGERPWRLVRGPGVRAGGPDFLQPSSRESNIRIYS 209
            P+E   R   AVAPG A  A              G  +   GP+  +           +
Sbjct: 806 APRELYLRATRAVAPGGAHAA--------------GASISPAGPEHRED---------LT 842

Query: 210 ESAPSWLSKDDIRRMRLLADSAVAGLRPV 238
           E+         + R +LL DS V   RPV
Sbjct: 843 ETQRPCPRSGALCRPQLLRDSPVGAARPV 871


>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
            sapiens]
          Length = 1309

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 8/120 (6%)

Query: 82   PEIPLDGTLAPPE-SQGNGSTLQPNVVYITLRSKRSKPANIRGTVKPKRRKKHAVASAAP 140
            P++P D T +PP  S  + S   P     T  S     A   G  +PK  ++ + +S  P
Sbjct: 1127 PDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPP 1186

Query: 141  GQEALVGPSLQPQEAAR------EADAVAPGYAQGANLVKIGERPWRLVRGPGVRAGGPD 194
               A    S  P  +         A A +P   +G +  K+G    RL    G R  GP+
Sbjct: 1187 SPLACPPISAPPPRSPSPLPGHPPAPARSPRLRRGQSADKLGTGE-RLDGEAGRRTRGPE 1245


>gi|17998698 GATA binding protein 5 [Homo sapiens]
          Length = 397

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 112 RSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQ 168
           R+  + P+ +  T       K   + A+P      GPS+ PQ + +E D++APG+ +
Sbjct: 308 RNASASPSAVASTDSSAATSKAKPSLASP---VCPGPSMAPQASGQEDDSLAPGHLE 361


>gi|241896898 family with sequence similarity 20, member A [Homo
           sapiens]
          Length = 541

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)

Query: 275 SEVFAFHLDRILGLNRTLPSVSR 297
           +E+ AFHLDRIL   R  P+V R
Sbjct: 262 AEIAAFHLDRILDFRRVPPTVGR 284


>gi|153070260 myristoylated alanine-rich protein kinase C substrate
           [Homo sapiens]
          Length = 332

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 137 SAAPGQEALVGPSL----QPQEAAREADAVAPGYAQGANLVKIGERPWRLVRGPGVRAG 191
           +AAPG+EA  G        PQEA  +  AVAP     ++  K  E P ++       AG
Sbjct: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAG 273


>gi|116256471 SNF1-like kinase [Homo sapiens]
          Length = 783

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 7/144 (4%)

Query: 119 ANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGER 178
           A+  G  +P+     ++   A  +EA  GP L+ ++  +E+   + G       V     
Sbjct: 423 ASCSGVFRPRPVSPSSLLDTAISEEARQGPGLEEEQDTQESLPSSTGRRHTLAEVSTRLS 482

Query: 179 PWR---LVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGL 235
           P     +V  P   A      + +S +S +   +  +P+ LS     +  L A S V   
Sbjct: 483 PLTAPCIVVSPSTTASP---AEGTSSDSCLTFSASKSPAGLSGTPATQGLLGACSPVRLA 539

Query: 236 RP-VSSRSGARLLVLEGGAPGAVL 258
            P + S+S   +L  +GG  GAVL
Sbjct: 540 SPFLGSQSATPVLQAQGGLGGAVL 563


>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 465

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 18/144 (12%)

Query: 51  LVSQVGRA---SLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVV 107
           L+S  GRA   S+Q   A E+   R     EP   E     T + P        L  + V
Sbjct: 80  LLSHRGRAQRRSIQAAAAQEQSTGRGCLGKEPPSQE---SWTRSDPRR-----CLSQDAV 131

Query: 108 YITLRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYA 167
               R  RS+P    G  K  RR+K AVA    G ++  G   +PQ   ++A A A   +
Sbjct: 132 RSGSRVCRSRPQTRGGGGKQPRRQKAAVA----GAKSRGGEGKKPQRRGQKA-ATAGAKS 186

Query: 168 QGANLVKIGERPWRLVRGPGVRAG 191
           +G  +  +G +  R  RG    AG
Sbjct: 187 RGGGVRSLGGKKMR--RGQKGAAG 208


>gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo
           sapiens]
          Length = 235

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 26/134 (19%)

Query: 127 PKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPWRLVRGP 186
           P+R  +H V+S++       GP +              G A+GA L +   +      GP
Sbjct: 81  PQRSHEHHVSSSSKSSACGAGPGV--------------GAAKGA-LCRTRTQHGHSECGP 125

Query: 187 GVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSRSGARL 246
           G+        +P SRES          +WL      R   L+ +  AG++ V+  +GAR 
Sbjct: 126 GIP-------KPPSRESEAGGDGGRQEAWLCVLGKLRFLTLSLNVQAGVKSVT--AGARR 176

Query: 247 LVLE--GGAPGAVL 258
           L+ E  G + GAVL
Sbjct: 177 LLCEFHGASAGAVL 190


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 69/302 (22%), Positives = 100/302 (33%), Gaps = 59/302 (19%)

Query: 58  ASLQHGQAAEKGPHRS-RDTAEPSFPEIPLD-----GTLAPPESQGN-----GSTLQPNV 106
           A+     +A  GP RS    AEP+ P +P +     G    PE +       G+  +P  
Sbjct: 419 AATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPER 478

Query: 107 VYITLRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEA------LVGPSLQPQEAAREAD 160
           +           A       PK   KH  A+A+ G  A         P ++P   + +A+
Sbjct: 479 I-----GTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAE 533

Query: 161 AVAP--GYAQGANLVKIGER---PWRLVRGPGVRAGG--------------PDFLQPSSR 201
           A AP    A+ A     G     P R     G    G              P   +P  R
Sbjct: 534 AAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLER 593

Query: 202 ESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSRSGARLLVLEGGAPGAVLRCG 261
            S     + S P W S+  +  ++ L +       P  ++ G R L   G  P       
Sbjct: 594 ASGRLPLARSGPVWRSEAALDDLQGLPE-------PQHAKPGPRKLAERG--PQDSGDRA 644

Query: 262 PSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEFIQDGRPCPIILWDASLSSAS 321
            SP G  K P + +           G     P+    A   +D  P P+ L   SLS   
Sbjct: 645 ASPAGPRKSPQEAAAA--------PGTREPCPAAQEPAP-SEDRNPFPVKLRSTSLSLKY 695

Query: 322 ND 323
            D
Sbjct: 696 RD 697


>gi|18765711 four jointed box 1 [Homo sapiens]
          Length = 437

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 22/161 (13%)

Query: 243 GARLLVLEGGAPG------AVLRCGPSPC---GLLKQPLDMSEVFAFHLDRILGLNRTLP 293
           GAR++ LE G  G      A    G   C   G+  + +   E  +++L R+LGL R +P
Sbjct: 150 GARMVALERGGCGRSSNRLARFADGTRACVRYGINPEQIQ-GEALSYYLARLLGLQRHVP 208

Query: 294 SVS------RKAEFIQDGRPCPIILW-DASLSSAS----NDTHSSVKLTWGTYQQLLKQK 342
            ++      R A++ Q         W + S+ S +    N T   V   W +    L+  
Sbjct: 209 PLALARVEARGAQWAQVQEELRAAHWTEGSVVSLTRWLPNLTDVVVPAPWRSEDGRLRPL 268

Query: 343 CWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQIYNRLDTN 383
               G +    S    +   +W+ + LFD+L   ++RL +N
Sbjct: 269 RDAGGELANL-SQAELVDLVQWTDLILFDYLTANFDRLVSN 308


>gi|222418771 glycerate kinase isoform 2 [Homo sapiens]
          Length = 234

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 183 VRGPGVRAGGPDFL-QPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSR 241
           +R    RAG  + L +P SR   ++++ E A   L   D  R  L       GL    + 
Sbjct: 116 IRAAMERAGKQEMLLKPHSR---VQVF-EGAEDNLPDRDALRAALAIQQLAEGL----TA 167

Query: 242 SGARLLVLEGGAPGAVLRCGPSPCG 266
               L+++ GG P  V RCG  PCG
Sbjct: 168 DDLLLVLISGGEPHPV-RCGGGPCG 191


>gi|14670366 POZ (BTB) and AT hook containing zinc finger 1 long B
           isoform [Homo sapiens]
          Length = 537

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 36/132 (27%), Positives = 44/132 (33%), Gaps = 28/132 (21%)

Query: 136 ASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPWRLVRGPGVRAGGPDF 195
           A+ A     + G     +EAAR A A   G A    L  +   P  +V GP         
Sbjct: 193 AALAANSNGIAGSMQPEEEAARAAGAAIAGQASLPVLPGVDRLP--MVAGP--------- 241

Query: 196 LQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSRSGARLLVLEGGAPG 255
           L P    S     + SAP    K    R R                  A LL    G+PG
Sbjct: 242 LSPQLLTSPFPSVASSAPPLTGKRGRGRPRK-----------------ANLLDSMFGSPG 284

Query: 256 AVLRCGPSPCGL 267
            +   G  PCGL
Sbjct: 285 GLREAGILPCGL 296


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,279,896
Number of Sequences: 37866
Number of extensions: 1078404
Number of successful extensions: 2964
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2943
Number of HSP's gapped (non-prelim): 44
length of query: 519
length of database: 18,247,518
effective HSP length: 107
effective length of query: 412
effective length of database: 14,195,856
effective search space: 5848692672
effective search space used: 5848692672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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