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Search of human proteins with 190341022
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190341022 tetraspanin 14 isoform 2 [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190341022 tetraspanin 14 isoform 2 [Homo sapiens] 319 5e-88
gi|190194420 tetraspanin 14 isoform 1 [Homo sapiens] 257 2e-69
gi|50511934 transmembrane 4 superfamily member 17 isoform b [Hom... 162 7e-41
gi|21264583 transmembrane 4 superfamily member 9 [Homo sapiens] 160 3e-40
gi|54859560 transmembrane 4 superfamily member 17 isoform a [Hom... 157 3e-39
gi|54859505 transmembrane 4 superfamily member 17 isoform c [Hom... 144 3e-35
gi|30425534 tetraspanin 33 [Homo sapiens] 107 4e-24
gi|6912530 transmembrane 4 superfamily member 15 [Homo sapiens] 78 3e-15
gi|119120834 tetraspanin 10 [Homo sapiens] 72 1e-13
gi|4502679 CD63 antigen isoform A [Homo sapiens] 52 2e-07
gi|91199546 CD63 antigen isoform B [Homo sapiens] 46 1e-05
gi|91807110 CD37 antigen isoform B [Homo sapiens] 44 4e-05
gi|4502663 CD37 antigen isoform A [Homo sapiens] 44 4e-05
gi|21265104 tetraspanin 7 [Homo sapiens] 41 3e-04
gi|122937466 tetraspanin 11 [Homo sapiens] 40 0.001
gi|67782354 CD82 antigen isoform 2 [Homo sapiens] 39 0.001
gi|4504813 CD82 antigen isoform 1 [Homo sapiens] 39 0.001
gi|87159824 CD151 antigen [Homo sapiens] 39 0.002
gi|87159822 CD151 antigen [Homo sapiens] 39 0.002
gi|21237751 CD151 antigen [Homo sapiens] 39 0.002
gi|21237748 CD151 antigen [Homo sapiens] 39 0.002
gi|118572596 peripherin 2 [Homo sapiens] 38 0.003
gi|4507541 transmembrane 4 superfamily member 6 [Homo sapiens] 34 0.038
gi|5729941 tetraspanin 9 [Homo sapiens] 32 0.15
gi|42476204 tetraspanin 18 isoform 2 [Homo sapiens] 32 0.19
gi|68800005 tetraspanin 4 isoform a [Homo sapiens] 32 0.19
gi|4507543 tetraspanin 4 isoform a [Homo sapiens] 32 0.19
gi|68800018 tetraspanin 4 isoform a [Homo sapiens] 32 0.19
gi|68800024 tetraspanin 4 isoform a [Homo sapiens] 32 0.19
gi|68800011 tetraspanin 4 isoform a [Homo sapiens] 32 0.19
>gi|190341022 tetraspanin 14 isoform 2 [Homo sapiens]
Length = 147
Score = 319 bits (818), Expect = 5e-88
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MHYYRYSNAKVSCWYKYLLFSYNIIFWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVP 60
MHYYRYSNAKVSCWYKYLLFSYNIIFWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVP
Sbjct: 1 MHYYRYSNAKVSCWYKYLLFSYNIIFWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVP 60
Query: 61 FSCCVPDPAQKVVNTQCGYDVRIQLKSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAI 120
FSCCVPDPAQKVVNTQCGYDVRIQLKSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAI
Sbjct: 61 FSCCVPDPAQKVVNTQCGYDVRIQLKSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAI 120
Query: 121 SLLQIFGIFLARTLISDIEAVKAGHHF 147
SLLQIFGIFLARTLISDIEAVKAGHHF
Sbjct: 121 SLLQIFGIFLARTLISDIEAVKAGHHF 147
>gi|190194420 tetraspanin 14 isoform 1 [Homo sapiens]
Length = 270
Score = 257 bits (657), Expect = 2e-69
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 28 NQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKS 87
NQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKS
Sbjct: 151 NQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKS 210
Query: 88 KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAVKAGHHF 147
KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAVKAGHHF
Sbjct: 211 KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAVKAGHHF 270
Score = 66.6 bits (161), Expect = 7e-12
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 1 MHYYRYSNAKVSCWYKYLLFSYNIIFW 27
MHYYRYSNAKVSCWYKYLLFSYNIIFW
Sbjct: 1 MHYYRYSNAKVSCWYKYLLFSYNIIFW 27
>gi|50511934 transmembrane 4 superfamily member 17 isoform b [Homo
sapiens]
Length = 329
Score = 162 bits (411), Expect = 7e-41
Identities = 73/118 (61%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 26 FWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQL 85
+W+ CCGA GP DW+LN+YFNC+ + SRE+CGVPFSCCV DPA+ V+NTQCGYDVR++L
Sbjct: 152 YWS-CCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKL 210
Query: 86 KSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAVKA 143
+ + I TKGC+ E WL N+ +VAGVF+ I+LLQIFGI LA+ L+SDI+AVKA
Sbjct: 211 ELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFMGIALLQIFGICLAQNLVSDIKAVKA 268
Score = 30.4 bits (67), Expect = 0.55
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 3 YYRYSNAKVSCWYKYLLFSYNIIFW 27
+ + +V C KY LF +NI+FW
Sbjct: 5 HQHFQEPEVGCCGKYFLFGFNIVFW 29
>gi|21264583 transmembrane 4 superfamily member 9 [Homo sapiens]
Length = 268
Score = 160 bits (406), Expect = 3e-40
Identities = 72/125 (57%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
Query: 19 LFSYNIIFWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCG 78
L + +W QCCGA+G +DW+LN+YFNC+ ++ SRE+CGVPFSCC DPA+ V+NTQCG
Sbjct: 143 LIDFTQEYW-QCCGAFGADDWNLNIYFNCTDSNASRERCGVPFSCCTKDPAEDVINTQCG 201
Query: 79 YDVRIQLKSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDI 138
YD R + + I+TKGC+ E WL N+ IVAG+FI I+LLQIFGI LA+ L+SDI
Sbjct: 202 YDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLAQNLVSDI 261
Query: 139 EAVKA 143
EAV+A
Sbjct: 262 EAVRA 266
Score = 33.1 bits (74), Expect = 0.086
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 6 YSNAKVSCWYKYLLFSYNIIFW 27
Y +VSC KY +F +N+IFW
Sbjct: 6 YKGPEVSCCIKYFIFGFNVIFW 27
>gi|54859560 transmembrane 4 superfamily member 17 isoform a [Homo
sapiens]
Length = 332
Score = 157 bits (397), Expect = 3e-39
Identities = 73/121 (60%), Positives = 94/121 (77%), Gaps = 4/121 (3%)
Query: 26 FWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQL 85
+W+ CCGA GP DW+LN+YFNC+ + SRE+CGVPFSCCV DPA+ V+NTQCGYDVR++L
Sbjct: 152 YWS-CCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKL 210
Query: 86 ---KSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAVK 142
+ + I TKGC+ E WL N+ +VAGVF+ I+LLQIFGI LA+ L+SDI+AVK
Sbjct: 211 VRGELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFMGIALLQIFGICLAQNLVSDIKAVK 270
Query: 143 A 143
A
Sbjct: 271 A 271
Score = 30.4 bits (67), Expect = 0.55
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 3 YYRYSNAKVSCWYKYLLFSYNIIFW 27
+ + +V C KY LF +NI+FW
Sbjct: 5 HQHFQEPEVGCCGKYFLFGFNIVFW 29
>gi|54859505 transmembrane 4 superfamily member 17 isoform c [Homo
sapiens]
Length = 266
Score = 144 bits (362), Expect = 3e-35
Identities = 66/112 (58%), Positives = 85/112 (75%), Gaps = 4/112 (3%)
Query: 26 FWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQL 85
+W+ CCGA GP DW+LN+YFNC+ + SRE+CGVPFSCCV DPA+ V+NTQCGYDVR++L
Sbjct: 152 YWS-CCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKL 210
Query: 86 ---KSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTL 134
+ + I TKGC+ E WL N+ +VAGVF+ I+LLQIFGI LA+ L
Sbjct: 211 VRGELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFMGIALLQIFGICLAQNL 262
Score = 30.4 bits (67), Expect = 0.55
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 3 YYRYSNAKVSCWYKYLLFSYNIIFW 27
+ + +V C KY LF +NI+FW
Sbjct: 5 HQHFQEPEVGCCGKYFLFGFNIVFW 29
>gi|30425534 tetraspanin 33 [Homo sapiens]
Length = 283
Score = 107 bits (267), Expect = 4e-24
Identities = 44/110 (40%), Positives = 72/110 (65%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSKW 89
CCG +DW N+YFNCS + SRE+C VP+SCC+P P Q V+NT CG ++ +
Sbjct: 156 CCGGISYKDWSQNMYFNCSEDNPSRERCSVPYSCCLPTPDQAVINTMCGQGMQAFDYLEA 215
Query: 90 DESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIE 139
+ I+T GCI L +W+ N++++ GV + +++ Q+ GI L++ L++ I+
Sbjct: 216 SKVIYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGILLSQILVNQIK 265
>gi|6912530 transmembrane 4 superfamily member 15 [Homo sapiens]
Length = 294
Score = 77.8 bits (190), Expect = 3e-15
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSK 88
+CCG DW N Y +CS CGVP++CC+ + + VVNT CGY + +
Sbjct: 153 KCCGGEDYRDWSKNQYHDCSAPGPLA--CGVPYTCCIRNTTE-VVNTMCGYKTIDKERFS 209
Query: 89 WDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAVKAGH 145
+ I+ +GC A+ W N I+AG+ + I L Q G+ L I+ +E + H
Sbjct: 210 VQDVIYVRGCTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEH 266
>gi|119120834 tetraspanin 10 [Homo sapiens]
Length = 355
Score = 72.4 bits (176), Expect = 1e-13
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQ--KVVNTQCGYDVRIQLK 86
+CCGA +DW N+YFNCS S + C +P SCC+ DP + VN QCG+ V
Sbjct: 211 RCCGAASYQDWQQNLYFNCS--SPGVQACSLPASCCI-DPREDGASVNDQCGFGVLRLDA 267
Query: 87 SKWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEA 140
++ +GC L WL N+ G IA+ LLQ + LA L+ + A
Sbjct: 268 DAAQRVVYLEGCGPPLRRWLRANLAASGGYAIAVVLLQGAELLLAARLLGALAA 321
>gi|4502679 CD63 antigen isoform A [Homo sapiens]
Length = 238
Score = 52.0 bits (123), Expect = 2e-07
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSK 88
+CCGA DW+ S K VP SCC+ V CG +
Sbjct: 144 KCCGAANYTDWE---------KIPSMSKNRVPDSCCIN------VTVGCGINFN------ 182
Query: 89 WDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEA 140
+++I +GC++ + WL +N+ +VA + I+ +++ GI A L+ I +
Sbjct: 183 -EKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVKSIRS 233
>gi|91199546 CD63 antigen isoform B [Homo sapiens]
Length = 236
Score = 45.8 bits (107), Expect = 1e-05
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSK 88
+CCGA DW+ S K VP SCC+ V CG +
Sbjct: 144 KCCGAANYTDWE---------KIPSMSKNRVPDSCCIN------VTVGCGINFN------ 182
Query: 89 WDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEA 140
+++I +GC++ + WL +N+ +VA + I+ + GI A L+ I +
Sbjct: 183 -EKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAF--VLGIVFACCLVKSIRS 231
>gi|91807110 CD37 antigen isoform B [Homo sapiens]
Length = 213
Score = 44.3 bits (103), Expect = 4e-05
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 26 FWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPA--QKVVNTQC---GYD 80
F +CCG + P+DW + +G+ R C D KV+ Q G+
Sbjct: 80 FQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHL 139
Query: 81 VRIQLKSKW-----DESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQI----FGIFLA 131
R + + + I+ +GC Q L+ WL N+ + G+ + + LL++ IFL
Sbjct: 140 ARSRHSADICAVPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLC 199
Query: 132 RTL 134
R L
Sbjct: 200 RNL 202
>gi|4502663 CD37 antigen isoform A [Homo sapiens]
Length = 281
Score = 44.3 bits (103), Expect = 4e-05
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 26 FWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPA--QKVVNTQC---GYD 80
F +CCG + P+DW + +G+ R C D KV+ Q G+
Sbjct: 148 FQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHL 207
Query: 81 VRIQLKSKW-----DESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQI----FGIFLA 131
R + + + I+ +GC Q L+ WL N+ + G+ + + LL++ IFL
Sbjct: 208 ARSRHSADICAVPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLC 267
Query: 132 RTL 134
R L
Sbjct: 268 RNL 270
>gi|21265104 tetraspanin 7 [Homo sapiens]
Length = 249
Score = 41.2 bits (95), Expect = 3e-04
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSKW 89
CCG +W + YF + G+P SCC+ + N Q +++ +
Sbjct: 150 CCGVQNYTNWSTSPYFL---------EHGIPPSCCMNETD---CNPQDLHNLTVAATK-- 195
Query: 90 DESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEA 140
+ KGC + S++ N+ I+AGV I+ Q+ G+ LA L I A
Sbjct: 196 ---VNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRFITA 243
>gi|122937466 tetraspanin 11 [Homo sapiens]
Length = 253
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSK 88
+CCG+ DW + Y A E VP SCC K V +CG K
Sbjct: 154 KCCGSNSSADWQHSTYILLREA----EGRQVPDSCC------KTVVVRCGQRAHPSNIYK 203
Query: 89 WDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFL 130
+ GC+ LE +L ++ ++ V I ++ LQI G+ L
Sbjct: 204 VEG-----GCLTKLEQFLADHLLLMGAVGIGVACLQICGMVL 240
>gi|67782354 CD82 antigen isoform 2 [Homo sapiens]
Length = 242
Score = 39.3 bits (90), Expect = 0.001
Identities = 23/117 (19%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSK 88
+CCG +W N +R + P SC V ++ + G+ +++
Sbjct: 123 KCCGWVSFYNWTDNAEL------MNRPEVTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQ 176
Query: 89 W-----DESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEA 140
D ++ +GC++ +++WL N+ I+ GV + ++++++ G+ L+ L + +
Sbjct: 177 SGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAIIELLGMVLSICLCRHVHS 233
>gi|4504813 CD82 antigen isoform 1 [Homo sapiens]
Length = 267
Score = 39.3 bits (90), Expect = 0.001
Identities = 23/117 (19%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSK 88
+CCG +W N +R + P SC V ++ + G+ +++
Sbjct: 148 KCCGWVSFYNWTDNAEL------MNRPEVTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQ 201
Query: 89 W-----DESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEA 140
D ++ +GC++ +++WL N+ I+ GV + ++++++ G+ L+ L + +
Sbjct: 202 SGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAIIELLGMVLSICLCRHVHS 258
>gi|87159824 CD151 antigen [Homo sapiens]
Length = 253
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCG--VPFSCCVPDPAQKVVNTQCGYDVRIQLKS 87
CCG+ +DW + + S+E G VP SCC K V CG
Sbjct: 155 CCGSNNSQDWRDSEWIR------SQEAGGRVVPDSCC------KTVVALCGQRDHASNIY 202
Query: 88 KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIE 139
K + GCI LE+++ ++ ++ V I I+ +Q+FG+ L ++
Sbjct: 203 KVEG-----GCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLK 249
>gi|87159822 CD151 antigen [Homo sapiens]
Length = 253
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCG--VPFSCCVPDPAQKVVNTQCGYDVRIQLKS 87
CCG+ +DW + + S+E G VP SCC K V CG
Sbjct: 155 CCGSNNSQDWRDSEWIR------SQEAGGRVVPDSCC------KTVVALCGQRDHASNIY 202
Query: 88 KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIE 139
K + GCI LE+++ ++ ++ V I I+ +Q+FG+ L ++
Sbjct: 203 KVEG-----GCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLK 249
>gi|21237751 CD151 antigen [Homo sapiens]
Length = 253
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCG--VPFSCCVPDPAQKVVNTQCGYDVRIQLKS 87
CCG+ +DW + + S+E G VP SCC K V CG
Sbjct: 155 CCGSNNSQDWRDSEWIR------SQEAGGRVVPDSCC------KTVVALCGQRDHASNIY 202
Query: 88 KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIE 139
K + GCI LE+++ ++ ++ V I I+ +Q+FG+ L ++
Sbjct: 203 KVEG-----GCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLK 249
>gi|21237748 CD151 antigen [Homo sapiens]
Length = 253
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCG--VPFSCCVPDPAQKVVNTQCGYDVRIQLKS 87
CCG+ +DW + + S+E G VP SCC K V CG
Sbjct: 155 CCGSNNSQDWRDSEWIR------SQEAGGRVVPDSCC------KTVVALCGQRDHASNIY 202
Query: 88 KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIE 139
K + GCI LE+++ ++ ++ V I I+ +Q+FG+ L ++
Sbjct: 203 KVEG-----GCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLK 249
>gi|118572596 peripherin 2 [Homo sapiens]
Length = 346
Score = 37.7 bits (86), Expect = 0.003
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 25/161 (15%)
Query: 1 MHYYRYSNAKVSCWYKYLLFSYNIIFWNQCCGAYGPEDWDLNVYFNCSGASYSREKC--- 57
M YYR ++ C+ K + I F +CCG G DW + + +S ++
Sbjct: 138 MKYYRDTDTPGRCFMKKTIDMLQIEF--KCCGNNGFRDWFEIQWISNRYLDFSSKEVKDR 195
Query: 58 ------------GVPFSCCVPDPAQ-----KVVNTQCGYDVRIQLKSKWDESIFTKGCIQ 100
GVPFSCC P + ++ N Y Q + + +++ +GC
Sbjct: 196 IKSNVDGRYLVDGVPFSCCNPSSPRPCIQYQITNNSAHYSYDHQTE---ELNLWVRGCRA 252
Query: 101 ALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAV 141
AL S+ + + V + I L ++ R L + ++ V
Sbjct: 253 ALLSYYSSLMNSMGVVTLLIWLFEVTITIGLRYLQTSLDGV 293
>gi|4507541 transmembrane 4 superfamily member 6 [Homo sapiens]
Length = 245
Score = 34.3 bits (77), Expect = 0.038
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 24/105 (22%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSKW 89
CCG DW + +Y EK G P SCC K+ + D
Sbjct: 153 CCGVTDYRDW--------TDTNYYSEK-GFPKSCC------KLEDCTPQRDA-------- 189
Query: 90 DESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTL 134
+ + +GC + + + + +VAG+ ++ Q+ GIFLA L
Sbjct: 190 -DKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCL 233
>gi|5729941 tetraspanin 9 [Homo sapiens]
Length = 239
Score = 32.3 bits (72), Expect = 0.15
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 13 CWYKYLLFSYNIIFWNQCCGAYGPEDW 39
C KY++F +N+IFW CG G W
Sbjct: 7 CCLKYMMFLFNLIFWLCGCGLLGVGIW 33
Score = 32.0 bits (71), Expect = 0.19
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 25/110 (22%)
Query: 29 QCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSK 88
+CCG DW + N VP CC+ + + CG + L
Sbjct: 146 RCCGVTDYTDWYPVLGENT-----------VPDRCCMEN------SQGCGRNATTPL--- 185
Query: 89 WDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDI 138
+ GC + ++ W N +++ V + I ++QI G+ + TL I
Sbjct: 186 -----WRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQHI 230
>gi|42476204 tetraspanin 18 isoform 2 [Homo sapiens]
Length = 248
Score = 32.0 bits (71), Expect = 0.19
Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 30 CCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQK----VVNTQCGYDVRIQL 85
CCG GPED+ F + + VP +CC +P + + +C + L
Sbjct: 147 CCGVNGPEDFKFASVFRL----LTLDSEEVPEACCRREPQSRDGVLLSREECLLGRSLFL 202
Query: 86 KSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIE 139
+GC + + +Y+ + I + +++F + A L I+
Sbjct: 203 NK--------QGCYTVILNTFETYVYLAGALAIGVLAIELFAMIFAMCLFRGIQ 248
>gi|68800005 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 32.0 bits (71), Expect = 0.19
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 16 KYLLFSYNIIFWNQCCGAYGPEDW 39
KYL+F++N++FW CG G W
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIW 33
>gi|4507543 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 32.0 bits (71), Expect = 0.19
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 16 KYLLFSYNIIFWNQCCGAYGPEDW 39
KYL+F++N++FW CG G W
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIW 33
>gi|68800018 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 32.0 bits (71), Expect = 0.19
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 16 KYLLFSYNIIFWNQCCGAYGPEDW 39
KYL+F++N++FW CG G W
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIW 33
>gi|68800024 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 32.0 bits (71), Expect = 0.19
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 16 KYLLFSYNIIFWNQCCGAYGPEDW 39
KYL+F++N++FW CG G W
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIW 33
>gi|68800011 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 32.0 bits (71), Expect = 0.19
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 16 KYLLFSYNIIFWNQCCGAYGPEDW 39
KYL+F++N++FW CG G W
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIW 33
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.141 0.486
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,668,543
Number of Sequences: 37866
Number of extensions: 237304
Number of successful extensions: 779
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 706
Number of HSP's gapped (non-prelim): 64
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.