Guide to the Human Genome
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Name: TMEM8C Sequence: fasta or formatted (221aa) NCBI GI: 122937402
Description:

transmembrane protein 8C

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         21           2
 C cysteine            3.6          8           2
 D aspartate           3.6          8           1
 E glutamate           2.3          5           1
 F phenylalanine       7.2         16           3
 G glycine             6.8         15           1
 H histidine           3.2          7           2
 I isoleucine          4.1          9           2
 K lysine              5.9         13           2
 L leucine            13.6         30           3
 M methionine          4.5         10           1
 N asparagine          0.9          2           1
 P proline             4.5         10           1
 Q glutamine           1.4          3           2
 R arginine            3.2          7           2
 S serine              6.3         14           2
 T threonine           5.4         12           1
 V valine              7.2         16           1
 W tryptophan          1.8          4           1
 Y tyrosine            5.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 8C 
TMEM8B                0.213   transmembrane protein 8B isoform a 
TMEM8B                0.213   transmembrane protein 8B isoform a 
TMEM8A                0.211   transmembrane protein 8 (five membrane-spanning dom...
TMEM8B                0.035   transmembrane protein 8B isoform b 
TFRC                  0.019   transferrin receptor 
TFRC                  0.019   transferrin receptor 
B3GNT8                0.007   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
HIRA                  0.007   HIR histone cell cycle regulation defective homolog ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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