Guide to the Human Genome
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Search of human proteins with 189095254

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|189095254 BEX family member 4 [Homo sapiens]
         (120 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189095254 BEX family member 4 [Homo sapiens]                       255   6e-69
gi|122937245 BEX family member 4 [Homo sapiens]                       255   6e-69
gi|46094060 nerve growth factor receptor (TNFRSF16) associated p...   108   1e-24
gi|7657044 nerve growth factor receptor (TNFRSF16) associated pr...   108   1e-24
gi|46094062 nerve growth factor receptor (TNFRSF16) associated p...   101   1e-22
gi|68533249 brain expressed, X-linked 1 [Homo sapiens]                 82   1e-16
gi|228008288 brain expressed, X-linked 5 [Homo sapiens]                81   2e-16
gi|61175244 brain expressed, X-linked 5 [Homo sapiens]                 81   2e-16
gi|14249132 brain expressed X-linked 2 [Homo sapiens]                  73   4e-14
gi|23397409 transcription elongation factor A (SII)-like 7 [Homo...    39   7e-04
gi|183396780 ubiquitin specific protease 20 [Homo sapiens]             34   0.022
gi|183397136 ubiquitin specific protease 20 [Homo sapiens]             34   0.022
gi|183397134 ubiquitin specific protease 20 [Homo sapiens]             34   0.022
gi|116686120 periaxin isoform 2 [Homo sapiens]                         33   0.065
gi|23503297 protease, serine, 35 [Homo sapiens]                        32   0.085
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    30   0.42 
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo...    30   0.42 
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo...    30   0.42 
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]            30   0.55 
gi|145279222 WD repeat domain 66 [Homo sapiens]                        29   0.72 
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo...    29   0.72 
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo...    29   0.72 
gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo...    29   0.72 
gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo...    29   0.72 
gi|4503257 death-domain associated protein isoform a [Homo sapiens]    29   0.94 
gi|215422388 death-domain associated protein isoform a [Homo sap...    29   0.94 
gi|215422366 death-domain associated protein isoform b [Homo sap...    29   0.94 
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]            29   0.94 
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]            29   0.94 
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]            29   0.94 

>gi|189095254 BEX family member 4 [Homo sapiens]
          Length = 120

 Score =  255 bits (651), Expect = 6e-69
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
           MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP
Sbjct: 1   MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60

Query: 61  NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP 120
           NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP
Sbjct: 61  NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP 120


>gi|122937245 BEX family member 4 [Homo sapiens]
          Length = 120

 Score =  255 bits (651), Expect = 6e-69
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
           MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP
Sbjct: 1   MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60

Query: 61  NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP 120
           NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP
Sbjct: 61  NFRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP 120


>gi|46094060 nerve growth factor receptor (TNFRSF16) associated
           protein 1 isoform b [Homo sapiens]
          Length = 111

 Score =  108 bits (269), Expect = 1e-24
 Identities = 61/111 (54%), Positives = 72/111 (64%), Gaps = 8/111 (7%)

Query: 16  NAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRHIEHNE 75
           N  QENE  EQ P QN EE R LGGGEG +P GN RRG+ RRL PNFRWAIPNR I    
Sbjct: 3   NIHQENEEMEQ-PMQNGEEDRPLGGGEGHQPAGN-RRGQARRLAPNFRWAIPNRQINDGM 60

Query: 76  A--RDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYD----FCLIP 120
               DD+E F+ +M EI+RK RE Q+R+ +R    E  NH+D    FCL+P
Sbjct: 61  GGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 111


>gi|7657044 nerve growth factor receptor (TNFRSF16) associated
           protein 1 isoform b [Homo sapiens]
          Length = 111

 Score =  108 bits (269), Expect = 1e-24
 Identities = 61/111 (54%), Positives = 72/111 (64%), Gaps = 8/111 (7%)

Query: 16  NAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRHIEHNE 75
           N  QENE  EQ P QN EE R LGGGEG +P GN RRG+ RRL PNFRWAIPNR I    
Sbjct: 3   NIHQENEEMEQ-PMQNGEEDRPLGGGEGHQPAGN-RRGQARRLAPNFRWAIPNRQINDGM 60

Query: 76  A--RDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYD----FCLIP 120
               DD+E F+ +M EI+RK RE Q+R+ +R    E  NH+D    FCL+P
Sbjct: 61  GGDGDDMEIFMEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 111


>gi|46094062 nerve growth factor receptor (TNFRSF16) associated
           protein 1 isoform a [Homo sapiens]
          Length = 101

 Score =  101 bits (251), Expect = 1e-22
 Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 7/101 (6%)

Query: 26  QAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRHIEHNEA--RDDVERF 83
           + P QN EE R LGGGEG +P GN RRG+ RRL PNFRWAIPNR I        DD+E F
Sbjct: 2   EQPMQNGEEDRPLGGGEGHQPAGN-RRGQARRLAPNFRWAIPNRQINDGMGGDGDDMEIF 60

Query: 84  VGQMMEIKRKTREQQMRHYMRFQTPEPDNHYD----FCLIP 120
           + +M EI+RK RE Q+R+ +R    E  NH+D    FCL+P
Sbjct: 61  MEEMREIRRKLRELQLRNCLRILMGELSNHHDHHDEFCLMP 101


>gi|68533249 brain expressed, X-linked 1 [Homo sapiens]
          Length = 125

 Score = 81.6 bits (200), Expect = 1e-16
 Identities = 49/126 (38%), Positives = 76/126 (60%), Gaps = 7/126 (5%)

Query: 1   MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
           MESKE+ A N+L+ ENA QENE  EQ   + E  +  L  GE   P GN RR RVR+ + 
Sbjct: 1   MESKEKRAVNSLSMENANQENEEKEQVANKGEPLALPLDAGEYCVPRGNRRRFRVRQPIL 60

Query: 61  NFRWAIPNRHIEHNEAR---DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---DNHY 114
            +RW + +R +   +AR   +++ER   ++ ++  K RE+Q+ H +R  + +P   D+H 
Sbjct: 61  QYRWDMMHR-LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHDHHD 119

Query: 115 DFCLIP 120
           +FCL+P
Sbjct: 120 EFCLMP 125


>gi|228008288 brain expressed, X-linked 5 [Homo sapiens]
          Length = 111

 Score = 81.3 bits (199), Expect = 2e-16
 Identities = 47/113 (41%), Positives = 70/113 (61%), Gaps = 10/113 (8%)

Query: 15  ENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRHIEHN 74
           EN  +EN+  E+AP QNE  +  LGGGE Q+PGGN++ G      P F   +PNR +++ 
Sbjct: 2   ENVPKENKVVEKAPVQNEAPA--LGGGEYQEPGGNVK-GVWAPPAPGFGEDVPNRLVDNI 58

Query: 75  EA----RDDVERFVGQMMEIKRKTREQQMRHYMRF---QTPEPDNHYDFCLIP 120
           +      DD+ERF+ +M E++RK RE Q+R+ +R      P  D+H +FCL+P
Sbjct: 59  DMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGDPPHHDHHDEFCLMP 111


>gi|61175244 brain expressed, X-linked 5 [Homo sapiens]
          Length = 111

 Score = 81.3 bits (199), Expect = 2e-16
 Identities = 47/113 (41%), Positives = 70/113 (61%), Gaps = 10/113 (8%)

Query: 15  ENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRHIEHN 74
           EN  +EN+  E+AP QNE  +  LGGGE Q+PGGN++ G      P F   +PNR +++ 
Sbjct: 2   ENVPKENKVVEKAPVQNEAPA--LGGGEYQEPGGNVK-GVWAPPAPGFGEDVPNRLVDNI 58

Query: 75  EA----RDDVERFVGQMMEIKRKTREQQMRHYMRF---QTPEPDNHYDFCLIP 120
           +      DD+ERF+ +M E++RK RE Q+R+ +R      P  D+H +FCL+P
Sbjct: 59  DMIDGDGDDMERFMEEMRELRRKIRELQLRYSLRILIGDPPHHDHHDEFCLMP 111


>gi|14249132 brain expressed X-linked 2 [Homo sapiens]
          Length = 128

 Score = 73.2 bits (178), Expect = 4e-14
 Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 10/129 (7%)

Query: 1   MESKEELAANNLNGENAQQEN---EGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRR 57
           MESKEE A NNL  EN  QEN   +  EQ   + E  +  L   E   P GN RR RVR+
Sbjct: 1   MESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRGNRRRFRVRQ 60

Query: 58  LVPNFRWAIPNRHIEHNEAR---DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP---D 111
            +  +RW I +R +   +AR   +++ER   ++ ++  K RE+Q+ H +R  + +P   D
Sbjct: 61  PILQYRWDIMHR-LGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAVSTDPPHHD 119

Query: 112 NHYDFCLIP 120
           +H +FCL+P
Sbjct: 120 HHDEFCLMP 128


>gi|23397409 transcription elongation factor A (SII)-like 7 [Homo
           sapiens]
          Length = 100

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 19  QENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRHIEHNEAR- 77
           +ENEG  +      EE R  G  E Q+  GN R+ R+ + +  F+  I  RH +  E   
Sbjct: 6   KENEGKPKCSVPKREEKRPYGEFERQQTEGNFRQ-RLLQSLEEFKEDIDYRHFKDEEMTR 64

Query: 78  --DDVERFVGQMMEIKRKTREQQMRHYMRFQTPEP 110
             D++ER + ++  +++K R     H      P P
Sbjct: 65  EGDEMERCLEEIRGLRKKFRALHSNHRHSRDRPYP 99


>gi|183396780 ubiquitin specific protease 20 [Homo sapiens]
          Length = 914

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 20  ENEGGEQAPTQNE----EESRHLGGGEGQKPGGNIRRGRVRRLVPN-------------- 61
           E   G+++P+++E    + S   G G+GQ  GG   +     L+P+              
Sbjct: 270 EKREGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSQAETELLIPDEAGRAISEKERMKD 329

Query: 62  --FRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDN 112
             F W     + E  +   DV+  +  + +   + +    R     +TPEPDN
Sbjct: 330 RKFSWGQQRTNSEQVDEDADVDTAMAALDDQPAEAQPPSPRSSSPCRTPEPDN 382


>gi|183397136 ubiquitin specific protease 20 [Homo sapiens]
          Length = 914

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 20  ENEGGEQAPTQNE----EESRHLGGGEGQKPGGNIRRGRVRRLVPN-------------- 61
           E   G+++P+++E    + S   G G+GQ  GG   +     L+P+              
Sbjct: 270 EKREGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSQAETELLIPDEAGRAISEKERMKD 329

Query: 62  --FRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDN 112
             F W     + E  +   DV+  +  + +   + +    R     +TPEPDN
Sbjct: 330 RKFSWGQQRTNSEQVDEDADVDTAMAALDDQPAEAQPPSPRSSSPCRTPEPDN 382


>gi|183397134 ubiquitin specific protease 20 [Homo sapiens]
          Length = 914

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 20  ENEGGEQAPTQNE----EESRHLGGGEGQKPGGNIRRGRVRRLVPN-------------- 61
           E   G+++P+++E    + S   G G+GQ  GG   +     L+P+              
Sbjct: 270 EKREGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSQAETELLIPDEAGRAISEKERMKD 329

Query: 62  --FRWAIPNRHIEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDN 112
             F W     + E  +   DV+  +  + +   + +    R     +TPEPDN
Sbjct: 330 RKFSWGQQRTNSEQVDEDADVDTAMAALDDQPAEAQPPSPRSSSPCRTPEPDN 382


>gi|116686120 periaxin isoform 2 [Homo sapiens]
          Length = 1461

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 17   AQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNR 69
            +Q E   GE +P+  EEE       EG   G + RRGRVR  +P    A P++
Sbjct: 1339 SQSEMVTGEGSPSPEEEEEEE---EEGSGEGASGRRGRVRVRLPRVGLAAPSK 1388


>gi|23503297 protease, serine, 35 [Homo sapiens]
          Length = 413

 Score = 32.3 bits (72), Expect = 0.085
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 15  ENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWA-IPNRHIEH 73
           + +++E  GG+Q     E       GG  +K  G  R  R+    P+F+W  + N HI  
Sbjct: 204 KRSRREASGGDQREGTREHLQERAKGGRRRKKSG--RGQRIAEGRPSFQWTRVKNTHIPK 261

Query: 74  NEAR----DDVERFVGQMMEIKRKTREQQM 99
             AR    D    +   ++E+KR  +++ M
Sbjct: 262 GWARGGMGDATLDYDYALLELKRAHKKKYM 291


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 2   ESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPG 47
           E +EE       GE  + E EG E+   + EEE    G GEG++ G
Sbjct: 866 EGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEE---GEGEGEEEG 908



 Score = 29.3 bits (64), Expect = 0.72
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 12/66 (18%)

Query: 2   ESKEELAANNLNGENAQQE-----------NEGGEQAPTQNE-EESRHLGGGEGQKPGGN 49
           E KEE     + GE  ++E            E GE+   Q E EE    G GE ++ GG 
Sbjct: 754 EGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGE 813

Query: 50  IRRGRV 55
           +  G V
Sbjct: 814 VEGGEV 819



 Score = 29.3 bits (64), Expect = 0.72
 Identities = 16/47 (34%), Positives = 21/47 (44%)

Query: 2   ESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGG 48
           E K E       GE  ++E EG E+     EEE    G  EG++  G
Sbjct: 821 EGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEG 867



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 4   KEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRR 57
           KEE A     GE    + E GE+  T+   E +  G   G+  GG +  G+  R
Sbjct: 777 KEERAGKEEKGEEEGDQGE-GEEEETEGRGEEKEEG---GEVEGGEVEEGKGER 826



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 4   KEELAANNLNGENAQQENEG-GEQAPTQNE-EESRHLGGGEGQKPGG 48
           +EE       GE  ++E EG GE+   + E EE    G GEG++  G
Sbjct: 837 EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEG 883



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 2   ESKEELAANNLNGENAQQENEG-GEQAPTQNEEES------RHLGGGEGQKPG 47
           E K E       GE  ++E EG GE    + EEE          G GEG++ G
Sbjct: 918 EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEG 970



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query: 2   ESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGG 48
           E +EE       GE  ++E EG E+      EE    G GE +   G
Sbjct: 828 EEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEG 874



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 14  GENAQQENEGGEQAPTQNEEESRHLGGGEGQKPG 47
           GE  + E EG E+   + EEE    G G+G++ G
Sbjct: 895 GEEEEGEGEGEEEGEGEGEEEE---GEGKGEEEG 925



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 14   GENAQQENEGGEQAPTQNEEESRHLGGGEGQKPG 47
            GE   +E EG E+   + E E    G GE ++ G
Sbjct: 986  GEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEG 1019


>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
           sapiens]
          Length = 265

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 3   SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLG-GGEGQKPGG 48
           S +   A + +GE+A+ E+  GE A T++ E    +G    G++P G
Sbjct: 75  SSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSG 121



 Score = 29.3 bits (64), Expect = 0.72
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 3   SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRG 53
           S E+ +  +L+GE    E E GEQ P+  +    H   G G++P G    G
Sbjct: 115 SGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEH---GSGEQPSGEQASG 161


>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
           sapiens]
          Length = 246

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 3   SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLG-GGEGQKPGG 48
           S +   A + +GE+A+ E+  GE A T++ E    +G    G++P G
Sbjct: 75  SSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSG 121



 Score = 29.3 bits (64), Expect = 0.72
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 3   SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRG 53
           S E+ +  +L+GE    E E GEQ P+  +    H   G G++P G    G
Sbjct: 115 SGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEH---GSGEQPSGEQASG 161


>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 29.6 bits (65), Expect = 0.55
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 22  EGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGR 54
           EGG + P++ EE +   GGG+   PG   R GR
Sbjct: 150 EGGGRRPSRREEAAALAGGGKRTAPGRRGRGGR 182


>gi|145279222 WD repeat domain 66 [Homo sapiens]
          Length = 1149

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 1  MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPG 47
          M+ +EE   N    E+ QQE++    A  +++EE R  G  EG++ G
Sbjct: 20 MKEEEEPNPNYKEVEDPQQESKDDTIAWRESQEEERKTGEEEGEEEG 66


>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
           sapiens]
          Length = 210

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 3   SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRG 53
           S E+ +  +L+GE    E E GEQ P+  +    H   G G++P G    G
Sbjct: 60  SGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEH---GSGEQPSGEQASG 106


>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
          sapiens]
          Length = 176

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 3  SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRG 53
          S E+ +  +L+GE    E E GEQ P+  +    H   G G++P G    G
Sbjct: 45 SGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEH---GSGEQPSGEQASG 91


>gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo
          sapiens]
          Length = 195

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 3  SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRG 53
          S E+ +  +L+GE    E E GEQ P+  +    H   G G++P G    G
Sbjct: 45 SGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEH---GSGEQPSGEQASG 91


>gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo
          sapiens]
          Length = 155

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 3  SKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRG 53
          S E+ +  +L+GE    E E GEQ P+  +    H   G G++P G    G
Sbjct: 45 SGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEH---GSGEQPSGEQASG 91


>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
          Length = 740

 Score = 28.9 bits (63), Expect = 0.94
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 2   ESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
           E +EE A ++   E+ +Q  EG E    ++EEE    G    + P  +++    + L P
Sbjct: 452 EEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEP 510


>gi|215422388 death-domain associated protein isoform a [Homo
           sapiens]
          Length = 740

 Score = 28.9 bits (63), Expect = 0.94
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 2   ESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
           E +EE A ++   E+ +Q  EG E    ++EEE    G    + P  +++    + L P
Sbjct: 452 EEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEP 510


>gi|215422366 death-domain associated protein isoform b [Homo
           sapiens]
          Length = 752

 Score = 28.9 bits (63), Expect = 0.94
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 2   ESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVP 60
           E +EE A ++   E+ +Q  EG E    ++EEE    G    + P  +++    + L P
Sbjct: 464 EEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEP 522


>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 28.9 bits (63), Expect = 0.94
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 15  ENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRR 57
           E++    E G  A  + E  +R L G  GQ  GG  R G   R
Sbjct: 74  EDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTR 116


>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 28.9 bits (63), Expect = 0.94
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 22  EGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGR 54
           EGG + P++ EE +   GGG+   PG   R GR
Sbjct: 150 EGGGRRPSRREEAAALAGGGKRTAPGLRGRGGR 182


>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 28.9 bits (63), Expect = 0.94
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 15  ENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRR 57
           E++    E G  A  + E  +R L G  GQ  GG  R G   R
Sbjct: 74  EDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTR 116


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,530,613
Number of Sequences: 37866
Number of extensions: 264303
Number of successful extensions: 1133
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 994
Number of HSP's gapped (non-prelim): 143
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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