Search of human proteins with 188595665

Search of human proteins with 188595665

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|188595665 FXYD domain-containing ion transport regulator 2
isoform 3 [Homo sapiens]
         (145 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|188595665 FXYD domain-containing ion transport regulator 2 is...   304   2e-83
gi|11125766 FXYD domain-containing ion transport regulator 2 iso...    54   5e-08
gi|11125764 FXYD domain-containing ion transport regulator 2 iso...    54   5e-08
gi|11612655 FXYD domain-containing ion transport regulator 6 [Ho...    37   0.008
gi|11612672 phospholemman precursor [Homo sapiens]                     37   0.008
gi|11612670 phospholemman precursor [Homo sapiens]                     37   0.008
gi|209862819 FXYD domain containing ion transport regulator 3 is...    32   0.19 
gi|209862811 FXYD domain containing ion transport regulator 3 is...    32   0.19 
gi|11612674 FXYD domain containing ion transport regulator 3 iso...    32   0.19 
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              32   0.25 
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]         31   0.32 
gi|239756849 PREDICTED: hypothetical protein [Homo sapiens]            31   0.42 
gi|239751345 PREDICTED: hypothetical protein XP_002347810 [Homo ...    31   0.42 
gi|239745844 PREDICTED: hypothetical protein XP_002343563 [Homo ...    31   0.42 
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    31   0.42 
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]               31   0.42 
gi|239757688 PREDICTED: similar to POM121-like 1, partial [Homo ...    30   0.55 
gi|11612659 FXYD domain-containing ion transport regulator 7 [Ho...    30   0.55 
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo...    30   0.71 
gi|239750384 PREDICTED: hypothetical protein XP_002347385 [Homo ...    30   0.71 
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]      30   0.71 
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       30   0.71 
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       30   0.71 
gi|168229226 hypothetical protein LOC401399 [Homo sapiens]             30   0.71 
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]           30   0.93 
gi|210032580 SET domain containing 1B [Homo sapiens]                   30   0.93 
gi|154937346 coiled-coil domain containing 129 [Homo sapiens]          30   0.93 
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    29   1.2  
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    29   1.2  
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    29   1.2  

>gi|188595665 FXYD domain-containing ion transport regulator 2
           isoform 3 [Homo sapiens]
          Length = 145

 Score =  304 bits (778), Expect = 2e-83
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MTGLSMDGGGSPKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTT 60
           MTGLSMDGGGSPKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTT
Sbjct: 1   MTGLSMDGGGSPKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTT 60

Query: 61  GCCGQAAERDSCWERPPIPLLLPSLSGDYETVRNGGLIFAGLAFIVGLLILLSKWGGLQG 120
           GCCGQAAERDSCWERPPIPLLLPSLSGDYETVRNGGLIFAGLAFIVGLLILLSKWGGLQG
Sbjct: 61  GCCGQAAERDSCWERPPIPLLLPSLSGDYETVRNGGLIFAGLAFIVGLLILLSKWGGLQG 120

Query: 121 RGADQGTSLLKAAEQAGFRELPREG 145
           RGADQGTSLLKAAEQAGFRELPREG
Sbjct: 121 RGADQGTSLLKAAEQAGFRELPREG 145


>gi|11125766 FXYD domain-containing ion transport regulator 2
           isoform 1 [Homo sapiens]
          Length = 66

 Score = 53.9 bits (128), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114
           DYETVRNGGLIFAGLAFIVGLLILLS+
Sbjct: 22  DYETVRNGGLIFAGLAFIVGLLILLSR 48



 Score = 50.1 bits (118), Expect = 7e-07
 Identities = 21/21 (100%), Positives = 21/21 (100%)

Query: 1  MTGLSMDGGGSPKGDVDPFYY 21
          MTGLSMDGGGSPKGDVDPFYY
Sbjct: 1  MTGLSMDGGGSPKGDVDPFYY 21


>gi|11125764 FXYD domain-containing ion transport regulator 2
           isoform 2 [Homo sapiens]
          Length = 64

 Score = 53.9 bits (128), Expect = 5e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114
           DYETVRNGGLIFAGLAFIVGLLILLS+
Sbjct: 20  DYETVRNGGLIFAGLAFIVGLLILLSR 46



 Score = 34.3 bits (77), Expect = 0.038
 Identities = 13/13 (100%), Positives = 13/13 (100%)

Query: 9  GGSPKGDVDPFYY 21
          GGSPKGDVDPFYY
Sbjct: 7  GGSPKGDVDPFYY 19


>gi|11612655 FXYD domain-containing ion transport regulator 6 [Homo
           sapiens]
          Length = 95

 Score = 36.6 bits (83), Expect = 0.008
 Identities = 15/27 (55%), Positives = 23/27 (85%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114
           DY+T+R GGL+FA + F VG+L++LS+
Sbjct: 33  DYQTLRIGGLVFAVVLFSVGILLILSR 59


>gi|11612672 phospholemman precursor [Homo sapiens]
          Length = 92

 Score = 36.6 bits (83), Expect = 0.008
 Identities = 14/27 (51%), Positives = 24/27 (88%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114
           DY++++ GGL+ AG+ FI+G+LI+LS+
Sbjct: 32  DYQSLQIGGLVIAGILFILGILIVLSR 58


>gi|11612670 phospholemman precursor [Homo sapiens]
          Length = 92

 Score = 36.6 bits (83), Expect = 0.008
 Identities = 14/27 (51%), Positives = 24/27 (88%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114
           DY++++ GGL+ AG+ FI+G+LI+LS+
Sbjct: 32  DYQSLQIGGLVIAGILFILGILIVLSR 58


>gi|209862819 FXYD domain containing ion transport regulator 3
           isoform 2 precursor [Homo sapiens]
          Length = 113

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSKW---GGLQGRG 122
           D+ +++ GGLI AG+   +G++I++S+W   G   GRG
Sbjct: 33  DWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQAGRG 70


>gi|209862811 FXYD domain containing ion transport regulator 3
           isoform4 precursor [Homo sapiens]
          Length = 96

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSKW---GGLQGRG 122
           D+ +++ GGLI AG+   +G++I++S+W   G   GRG
Sbjct: 33  DWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQAGRG 70


>gi|11612674 FXYD domain containing ion transport regulator 3
           isoform 2 precursor [Homo sapiens]
          Length = 113

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSKW---GGLQGRG 122
           D+ +++ GGLI AG+   +G++I++S+W   G   GRG
Sbjct: 33  DWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQAGRG 70


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 31.6 bits (70), Expect = 0.25
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 8    GGGSPKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQVHALC--PLSPLVTTGCCGQ 65
            GGG P   V P +      L     P+GPLPPS    +P    L   PLSP+   G  G 
Sbjct: 1173 GGGRPPPQVCPGWSPPAKSLAPKKPPTGPLPPS---KEPLKEKLIPGPLSPVARGGSNGG 1229

Query: 66   AAERDSCWERP 76
            +       ERP
Sbjct: 1230 SNVGMEDGERP 1240


>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
          Length = 1388

 Score = 31.2 bits (69), Expect = 0.32
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 4   LSMDGGGSPKGDVDPFYYGKPGPLRTLPEPSGPLPPSSG 42
           + M G   PKG+        PGP    PEPSGP+ P++G
Sbjct: 555 VGMKGQAGPKGEKGDAGEELPGP----PEPSGPVGPTAG 589


>gi|239756849 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 24  PGPLRTLPEPSGPLPPSSGLSQPQV 48
           P PL +LP P+ PLPP  G  QPQ+
Sbjct: 140 PAPLWSLPMPTSPLPPGVG-GQPQL 163


>gi|239751345 PREDICTED: hypothetical protein XP_002347810 [Homo
           sapiens]
          Length = 329

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 24  PGPLRTLPEPSGPLPPSSGLSQPQV 48
           P PL +LP P+ PLPP  G  QPQ+
Sbjct: 140 PAPLWSLPMPTSPLPPGVG-GQPQL 163


>gi|239745844 PREDICTED: hypothetical protein XP_002343563 [Homo
           sapiens]
          Length = 329

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 24  PGPLRTLPEPSGPLPPSSGLSQPQV 48
           P PL +LP P+ PLPP  G  QPQ+
Sbjct: 140 PAPLWSLPMPTSPLPPGVG-GQPQL 163


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 23  KPGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTTGCCGQAAERDSCWERPP 77
           KPGP  ++P PS P P  S  +QP   A+    P+ ++      ++  S  E+ P
Sbjct: 285 KPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKP 339


>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
          Length = 1860

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 18/61 (29%), Positives = 27/61 (44%)

Query: 24  PGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTTGCCGQAAERDSCWERPPIPLLLP 83
           PG  R  P  + PLPP++  S+  +  L      +T+     A+ R S  + PP   L  
Sbjct: 430 PGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHKPPPFTALSS 489

Query: 84  S 84
           S
Sbjct: 490 S 490



 Score = 27.7 bits (60), Expect = 3.5
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 24  PGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTTGC---CGQAAERDS---CWERPP 77
           PG  R+   P+  +PP+SG S P+     P      TG     G  A + +      R P
Sbjct: 495 PGSTRSTRPPATMVPPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKAGPKSSPRKP 554

Query: 78  IPL 80
           +PL
Sbjct: 555 VPL 557


>gi|239757688 PREDICTED: similar to POM121-like 1, partial [Homo
          sapiens]
          Length = 346

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 1  MTGLSMDGGGSPKGDVDPFYYGKPGPLRTLPEPSGPLP 38
          +  L   G G P+ D DP     PG  R +PE +G  P
Sbjct: 32 LRALKESGAGMPEQDKDPRVQENPGDQRRVPEVTGDAP 69


>gi|11612659 FXYD domain-containing ion transport regulator 7 [Homo
           sapiens]
          Length = 80

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 12/27 (44%), Positives = 20/27 (74%)

Query: 88  DYETVRNGGLIFAGLAFIVGLLILLSK 114
           DY TV+  G+  A + F++G+LI++SK
Sbjct: 21  DYNTVQTVGMTLATILFLLGILIVISK 47


>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
           sapiens]
          Length = 1242

 Score = 30.0 bits (66), Expect = 0.71
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)

Query: 37  LPPSSGLSQPQVHALCPLSPLVTTGCCGQAAERDSCWE 74
           +PPS  L+ P V    P   +V  G CG   E+  CWE
Sbjct: 821 VPPSGELAPPAVPPQAPRCHVVIRGLCG---EQPMCWE 855


>gi|239750384 PREDICTED: hypothetical protein XP_002347385 [Homo
          sapiens]
          Length = 175

 Score = 30.0 bits (66), Expect = 0.71
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 22 GKPGPL---RTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTTGCCGQAAERDSCWERP 76
          G P P     ++P+ +G   P+   S P   AL P +    TG       RD  WE P
Sbjct: 9  GNPEPTLETSSIPQSTGAAHPAERTSLPTTEALPPPARPPVTGGQSNVTSRDPDWEAP 66


>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
          Length = 1159

 Score = 30.0 bits (66), Expect = 0.71
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 6/43 (13%)

Query: 24 PGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVTTGCCGQA 66
          PGP    P P  P PP S  S+P       L  L+  G CG A
Sbjct: 13 PGPTARAPSPGAPPPPRSPRSRPL------LLLLLLLGACGAA 49


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 30.0 bits (66), Expect = 0.71
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%)

Query: 24  PGPLRTLPEPS-GPLPPSSGLSQPQVHAL------CPLSP 56
           PGP   LP P+ G  PP+S L QP+  +L       PL+P
Sbjct: 934 PGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAP 973


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 30.0 bits (66), Expect = 0.71
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%)

Query: 24   PGPLRTLPEPS-GPLPPSSGLSQPQVHAL------CPLSP 56
            PGP   LP P+ G  PP+S L QP+  +L       PL+P
Sbjct: 1016 PGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAP 1055


>gi|168229226 hypothetical protein LOC401399 [Homo sapiens]
          Length = 899

 Score = 30.0 bits (66), Expect = 0.71
 Identities = 33/86 (38%), Positives = 38/86 (44%), Gaps = 14/86 (16%)

Query: 52  CP--LSPLVTTGC-CGQAAERDSCWERPPIPLLLPSLSGDYETVRNGGLIFAGLAFIVGL 108
           CP  L+ L+  G     AA   S   RP  PL L S           GL     AF+ GL
Sbjct: 463 CPTGLAALLLLGLGLAAAAALGSAAHRPLRPLRLASR----------GLHAFLAAFLSGL 512

Query: 109 LILLSKWGGLQGR-GADQGTSLLKAA 133
           L+ LS WGG + R GA  G S  K A
Sbjct: 513 LLALSCWGGRRRRAGAPLGGSGFKGA 538


>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
          Length = 1106

 Score = 29.6 bits (65), Expect = 0.93
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 21 YGKPGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPLVT-TGCCGQAAERDSCWERP 76
          YG+P  LR LP    P   + GLS P     C  + L++     G A E +SC E P
Sbjct: 13 YGEPCCLRPLPSQGAPSVGTEGLSGP---PFCHQANLMSGPHSYGPARETNSCTEGP 66


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 29.6 bits (65), Expect = 0.93
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 12/75 (16%)

Query: 24   PGPLRT-LPEPSGPLPPSSGLSQPQV----HALCPLSPLV------TTGCCGQAAERDSC 72
            P PL+  LP P  P PPS    +P+     H   P  PL       T G CG  A+  S 
Sbjct: 1275 PLPLQPPLPPPRPPRPPSPP-PEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQST 1333

Query: 73   WERPPIPLLLPSLSG 87
               P  P   P LSG
Sbjct: 1334 ETVPATPGGEPPLSG 1348


>gi|154937346 coiled-coil domain containing 129 [Homo sapiens]
          Length = 1044

 Score = 29.6 bits (65), Expect = 0.93
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 11/98 (11%)

Query: 10  GSPKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQVHALCPLSPL-VTTGCCGQAAE 68
           GS KG        +   L++L   +G  P S  + + Q       +PL +T+G  G   +
Sbjct: 355 GSVKGRTQKENLFQTNKLKSLSHLAGKGPDSFEMEEVQSFEEETGNPLDMTSGTVGARVD 414

Query: 69  R-DSCW-------ERP--PIPLLLPSLSGDYETVRNGG 96
           R +SC        E P  P+PL +PSL        NGG
Sbjct: 415 RANSCQSDSSGFLEEPLEPLPLQMPSLPNSQSPAENGG 452


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 1   MTGLSMDGGGS-----PKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQV 48
           M G+ M  GG      P   +D    G P PL      S P+P S   S PQ+
Sbjct: 93  MKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQM 145


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 1   MTGLSMDGGGS-----PKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQV 48
           M G+ M  GG      P   +D    G P PL      S P+P S   S PQ+
Sbjct: 93  MKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQM 145


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 1   MTGLSMDGGGS-----PKGDVDPFYYGKPGPLRTLPEPSGPLPPSSGLSQPQV 48
           M G+ M  GG      P   +D    G P PL      S P+P S   S PQ+
Sbjct: 93  MKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQM 145


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.142    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,549,210
Number of Sequences: 37866
Number of extensions: 449837
Number of successful extensions: 2295
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 2179
Number of HSP's gapped (non-prelim): 203
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.