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Search of human proteins with 187761377
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187761377 maestro isoform b [Homo sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187761377 maestro isoform b [Homo sapiens] 393 e-110
gi|187761375 maestro isoform a [Homo sapiens] 369 e-102
gi|187761379 maestro isoform c [Homo sapiens] 330 6e-91
gi|187761381 maestro isoform d [Homo sapiens] 305 1e-83
gi|154240671 HEAT repeat family member 7B2 [Homo sapiens] 86 2e-17
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 55 5e-08
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 55 5e-08
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 55 5e-08
gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5... 40 0.002
gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens] 40 0.002
gi|148727311 hypothetical protein LOC389690 [Homo sapiens] 33 0.16
gi|209969838 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 0.77
gi|209969836 transportin 2 (importin 3, karyopherin beta 2b) iso... 31 0.77
gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isof... 31 0.77
gi|13376768 elongation factor RNA polymerase II-like 3 [Homo sap... 30 1.7
gi|4826730 FK506 binding protein 12-rapamycin associated protein... 29 2.2
gi|23510381 transportin 1 isoform 2 [Homo sapiens] 29 2.2
gi|133925811 transportin 1 isoform 1 [Homo sapiens] 29 2.2
gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens] 29 2.9
gi|122937347 pleckstrin homology domain containing, family M, me... 28 3.8
gi|109134351 zinc finger and BTB domain containing 44 [Homo sapi... 28 3.8
gi|47132537 phosphodiesterase 8A isoform 2 [Homo sapiens] 27 8.5
gi|27734721 phosphodiesterase 8A isoform 1 [Homo sapiens] 27 8.5
gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens] 27 8.5
gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens] 27 8.5
>gi|187761377 maestro isoform b [Homo sapiens]
Length = 196
Score = 393 bits (1009), Expect = e-110
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP
Sbjct: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
Query: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK
Sbjct: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
Query: 121 IQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLS 180
IQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLS
Sbjct: 121 IQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLS 180
Query: 181 HYHPEILQFFYANKIL 196
HYHPEILQFFYANKIL
Sbjct: 181 HYHPEILQFFYANKIL 196
>gi|187761375 maestro isoform a [Homo sapiens]
Length = 248
Score = 369 bits (946), Expect = e-102
Identities = 196/248 (79%), Positives = 196/248 (79%), Gaps = 52/248 (20%)
Query: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP
Sbjct: 1 MDQRQRRILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDP 60
Query: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK
Sbjct: 61 SAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGK 120
Query: 121 IQGKGLGSFFIDITLQTRTLLDD------------------------------------- 143
IQGKGLGSFFIDITLQTRTLLDD
Sbjct: 121 IQGKGLGSFFIDITLQTRTLLDDENDSLRYSAFVLFGQLAAFAGRKWKKFFTSQVKQTRD 180
Query: 144 ---------------ACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ 188
ACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ
Sbjct: 181 SLLIHLQDRNPQVAKACKTTFQACSPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ 240
Query: 189 FFYANKIL 196
FFYANKIL
Sbjct: 241 FFYANKIL 248
>gi|187761379 maestro isoform c [Homo sapiens]
Length = 210
Score = 330 bits (845), Expect = 6e-91
Identities = 163/164 (99%), Positives = 164/164 (100%)
Query: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
Query: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQAC 152
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQAC
Sbjct: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQAC 166
Query: 153 SPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 196
SPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL
Sbjct: 167 SPYLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 210
>gi|187761381 maestro isoform d [Homo sapiens]
Length = 262
Score = 305 bits (782), Expect = 1e-83
Identities = 163/216 (75%), Positives = 164/216 (75%), Gaps = 52/216 (24%)
Query: 33 KVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 92
+VSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD
Sbjct: 47 QVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLD 106
Query: 93 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD--------- 143
LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD
Sbjct: 107 LLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDENDSLRYSA 166
Query: 144 -------------------------------------------ACKTTFQACSPYLKLKE 160
ACKTTFQACSPYLKLKE
Sbjct: 167 FVLFGQLAAFAGRKWKKFFTSQVKQTRDSLLIHLQDRNPQVAKACKTTFQACSPYLKLKE 226
Query: 161 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 196
EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL
Sbjct: 227 EYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANKIL 262
>gi|154240671 HEAT repeat family member 7B2 [Homo sapiens]
Length = 1585
Score = 85.9 bits (211), Expect = 2e-17
Identities = 49/136 (36%), Positives = 79/136 (58%)
Query: 8 ILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDPSAKKRHM 67
I+ Q LS TS + R + +FFS++ + K L+NV ++ + A D +A R M
Sbjct: 1263 IMEQLLSSLTSSSENYRITGAAFFSELMKEPILWKHGNLRNVLILMDQSAWDSNATLRQM 1322
Query: 68 AMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLG 127
A+R LG A AP KV+K+K+++L+ ++ GLY EV+ ES+K L +L + + +
Sbjct: 1323 AIRGLGNTASGAPHKVKKHKQLMLESIIRGLYHLARTEVVCESLKALKKILELLTDRDVS 1382
Query: 128 SFFIDITLQTRTLLDD 143
+F +I LQTRT +D
Sbjct: 1383 FYFKEIVLQTRTFFED 1398
>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1723
Score = 54.7 bits (130), Expect = 5e-08
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 43 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1420 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1479
Query: 101 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD 143
PV+ V E M+ LT +L +++ +GS F ++ Q R D+
Sbjct: 1480 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDN 1522
>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1706
Score = 54.7 bits (130), Expect = 5e-08
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 43 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1412 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1471
Query: 101 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD 143
PV+ V E M+ LT +L +++ +GS F ++ Q R D+
Sbjct: 1472 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDN 1514
>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1710
Score = 54.7 bits (130), Expect = 5e-08
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 43 REPLKNVFFILAERARDPSAKK--RHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
+E L +L E+ D + R +++R LG MA AP KV++Y+K++L+ + L +
Sbjct: 1416 QEKLLKPAALLLEKGADQEEDEALRVLSLRALGNMALGAPKKVKQYRKVLLEKCLGPLRE 1475
Query: 101 PVNLEVIHESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDD 143
PV+ V E M+ LT +L +++ +GS F ++ Q R D+
Sbjct: 1476 PVSNSVTAEGMEALTKILAELREGDVGSSFDAMSEQCRIFFDN 1518
>gi|113420243 PREDICTED: hypothetical protein LOC377711 isoform 5
[Homo sapiens]
Length = 1218
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 53 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVN--LEVIHES 110
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 945 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1004
Query: 111 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACS 153
M L ++ ++ L S + + ++ R D K F+ S
Sbjct: 1005 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSE-KMEFRTAS 1046
>gi|150010654 HEAT repeat containing 7A isoform 1 [Homo sapiens]
Length = 1641
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 53 LAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVN--LEVIHES 110
LA R +D A R + +R L +A PDKVR + +L ++ GL D N V E+
Sbjct: 1368 LAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEA 1427
Query: 111 MKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACS 153
M L ++ ++ L S + + ++ R D K F+ S
Sbjct: 1428 MLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSE-KMEFRTAS 1469
>gi|148727311 hypothetical protein LOC389690 [Homo sapiens]
Length = 1318
Score = 33.1 bits (74), Expect = 0.16
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 8 ILGQPLSIPTSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDPSAKKRHM 67
+L Q L S +++R I +K + + P + +LA+ DPS + R +
Sbjct: 1001 VLRQLLPSLQSPQERERKVAILILTKFLYSPVLLEVLPKQAALTVLAQGLHDPSPEVRVL 1060
Query: 68 AMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKGLG 127
+++ L + + PDK + + LL G + + +VI M T++ L ++ +G G
Sbjct: 1061 SLQGLSNILFH-PDKGSLLQGQLRPLLD-GFFQSSD-QVIVCIMGTVSDTLHRLGAQGTG 1117
Query: 128 SFFIDITLQTRTLLDD 143
S + + + TR+ +D
Sbjct: 1118 SQSLGVAISTRSFFND 1133
>gi|209969838 transportin 2 (importin 3, karyopherin beta 2b)
isoform 1 [Homo sapiens]
Length = 897
Score = 30.8 bits (68), Expect = 0.77
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|209969836 transportin 2 (importin 3, karyopherin beta 2b)
isoform 3 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 0.77
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isoform
2 [Homo sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 0.77
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLV--YGLYDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV +G Y N
Sbjct: 475 LKPLMTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKN 534
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 535 LLILYDAIGTLADSVG 550
>gi|13376768 elongation factor RNA polymerase II-like 3 [Homo
sapiens]
Length = 397
Score = 29.6 bits (65), Expect = 1.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 155 YLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQFFYANK 194
Y K +++Y EE +R L+Q+LSH IL+F N+
Sbjct: 356 YKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKNR 395
>gi|4826730 FK506 binding protein 12-rapamycin associated protein 1
[Homo sapiens]
Length = 2549
Score = 29.3 bits (64), Expect = 2.2
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 47 KNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYDP---VN 103
K + IL E + + + R LG + AP +R Y + +L L+ L DP N
Sbjct: 732 KMLIQILTELEHSGIGRIKEQSARMLGHLVSNAPRLIRPYMEPILKALILKLKDPDPDPN 791
Query: 104 LEVIHESMKT---LTVVLGKIQGKGLGSFFIDI--TLQTRTLL 141
VI+ + T L V G K + FI I LQ +LL
Sbjct: 792 PGVINNVLATIGELAQVSGLEMRKWVDELFIIIMDMLQDSSLL 834
>gi|23510381 transportin 1 isoform 2 [Homo sapiens]
Length = 890
Score = 29.3 bits (64), Expect = 2.2
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 478 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 537
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 538 LLILYDAIGTLADSVG 553
>gi|133925811 transportin 1 isoform 1 [Homo sapiens]
Length = 898
Score = 29.3 bits (64), Expect = 2.2
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 46 LKNVFFILAERARDPSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGL--YDPVN 103
LK + L +R D + + + A T+ EA ++ Y +LD LV+ Y N
Sbjct: 486 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKN 545
Query: 104 LEVIHESMKTLTVVLG 119
L ++++++ TL +G
Sbjct: 546 LLILYDAIGTLADSVG 561
>gi|48762926 PWP2 periodic tryptophan protein homolog [Homo sapiens]
Length = 919
Score = 28.9 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 60 PSAKKRHMAMRNLGTMAYEAPDKVRKYKKIVLDLLVYGLYD 100
P +K + N+ M Y AP K R++ VLD +G YD
Sbjct: 106 PDGRKFVVTKGNIAQM-YHAPGKKREFNAFVLDKTYFGPYD 145
>gi|122937347 pleckstrin homology domain containing, family M,
member 3 [Homo sapiens]
Length = 761
Score = 28.5 bits (62), Expect = 3.8
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 19/126 (15%)
Query: 81 DKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVL----------GKIQGKGLGSFF 130
D ++Y+ I+ +Y L + + K T VL GK+ L S+
Sbjct: 354 DSSKQYQNILKSGTLYRL-------TVQNNWKAFTFVLSRAYLMAFQPGKLDEDPLLSYN 406
Query: 131 IDITLQTRTLLDDACKTTFQACSP--YLKLKEEYSFQSEEDQRNTKLYQQLSHYHPEILQ 188
+D+ L + D C + FQ P L+L+ E +++E K+ ++ + LQ
Sbjct: 407 VDVCLAVQMDNLDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKIAANVARSSEQNLQ 466
Query: 189 FFYANK 194
NK
Sbjct: 467 VTLRNK 472
>gi|109134351 zinc finger and BTB domain containing 44 [Homo
sapiens]
Length = 453
Score = 28.5 bits (62), Expect = 3.8
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 108 HESMKTLTVVLGKIQGKGLGSFFIDITLQTRTLLDDACKTTFQACSPYLKLKEEYSFQSE 167
H S +LGK+ F DIT++ + + A K ACS + + K Q+E
Sbjct: 8 HSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTK--LVGQAE 65
Query: 168 EDQRN 172
++ +N
Sbjct: 66 DENKN 70
>gi|47132537 phosphodiesterase 8A isoform 2 [Homo sapiens]
Length = 783
Score = 27.3 bits (59), Expect = 8.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 53 LAERARDPSAKKRHMAMRNLGTMAYEAP 80
+A RA + S+++RH +M + +M EAP
Sbjct: 319 VASRATEVSSQRRHSSMARIHSMTIEAP 346
>gi|27734721 phosphodiesterase 8A isoform 1 [Homo sapiens]
Length = 829
Score = 27.3 bits (59), Expect = 8.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 53 LAERARDPSAKKRHMAMRNLGTMAYEAP 80
+A RA + S+++RH +M + +M EAP
Sbjct: 365 VASRATEVSSQRRHSSMARIHSMTIEAP 392
>gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]
Length = 1173
Score = 27.3 bits (59), Expect = 8.5
Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 17 TSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMA 76
T P ++ S+I FF S + R P K+ R S R L +
Sbjct: 41 TESPGDRKQSIIDFFKPASKQDRHMLDSPQKSNIKYGGSRL---SITGTEQFERKLSSPK 97
Query: 77 YEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKG 125
P +V K +++ + G+ + IHES + + K KG
Sbjct: 98 ESKPKRVPPEKSPIIEAFMKGVKEHHEDHGIHESRRPCLSLASKYLAKG 146
>gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens]
Length = 1186
Score = 27.3 bits (59), Expect = 8.5
Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 3/109 (2%)
Query: 17 TSQPKQKRTSMISFFSKVSWKLRFQKREPLKNVFFILAERARDPSAKKRHMAMRNLGTMA 76
T P ++ S+I FF S + R P K+ R S R L +
Sbjct: 41 TESPGDRKQSIIDFFKPASKQDRHMLDSPQKSNIKYGGSRL---SITGTEQFERKLSSPK 97
Query: 77 YEAPDKVRKYKKIVLDLLVYGLYDPVNLEVIHESMKTLTVVLGKIQGKG 125
P +V K +++ + G+ + IHES + + K KG
Sbjct: 98 ESKPKRVPPEKSPIIEAFMKGVKEHHEDHGIHESRRPCLSLASKYLAKG 146
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,897,799
Number of Sequences: 37866
Number of extensions: 269298
Number of successful extensions: 753
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 733
Number of HSP's gapped (non-prelim): 29
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.