PDE6B 162

Name: PDE6B	Sequence: fasta or formatted (854aa)		NCBI GI: 105990537
Description: phosphodiesterase 6B isoform 1		Referenced in: Cyclic Nucleotides Photoreceptors and Related Functions
Other entries for this name: alt prot [575aa] phosphodiesterase 6B isoform 3 alt prot [853aa] phosphodiesterase 6B isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 54 3 C cysteine 2.5 21 2 D aspartate 6.6 56 2 E glutamate 9.0 77 4 F phenylalanine 5.3 45 2 G glycine 4.3 37 2 H histidine 2.3 20 2 I isoleucine 4.8 41 2 K lysine 6.8 58 2 L leucine 10.3 88 2 M methionine 3.6 31 3 N asparagine 4.0 34 2 P proline 3.7 32 2 Q glutamine 4.0 34 2 R arginine 4.6 39 2 S serine 5.3 45 2 T threonine 4.7 40 2 V valine 7.1 61 2 W tryptophan 1.2 10 1 Y tyrosine 3.6 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosphodiesterase 6B isoform 1 PDE6B 0.996 phosphodiesterase 6B isoform 2 PDE6A 0.727 phosphodiesterase 6A PDE6B 0.672 phosphodiesterase 6B isoform 3 PDE6C 0.652 phosphodiesterase 6C PDE11A 0.237 phosphodiesterase 11A isoform 4 PDE5A 0.223 phosphodiesterase 5A isoform 1 PDE5A 0.223 phosphodiesterase 5A isoform 3 PDE5A 0.223 phosphodiesterase 5A isoform 2 PDE11A 0.208 phosphodiesterase 11A isoform 3 PDE11A 0.189 phosphodiesterase 11A isoform 2 PDE11A 0.176 phosphodiesterase 11A isoform 1 PDE2A 0.151 phosphodiesterase 2A isoform 3 PDE2A 0.151 phosphodiesterase 2A isoform 2 PDE2A 0.151 phosphodiesterase 2A isoform 1 PDE10A 0.121 phosphodiesterase 10A isoform 1 PDE10A 0.121 phosphodiesterase 10A isoform 2 PDE4D 0.069 phosphodiesterase 4D isoform 1 PDE4D 0.069 phosphodiesterase 4D isoform 2 PDE4A 0.068 phosphodiesterase 4A isoform 3 PDE4A 0.068 phosphodiesterase 4A isoform 2 PDE4A 0.068 phosphodiesterase 4A isoform 1 PDE4A 0.068 phosphodiesterase 4A isoform 4 PDE4C 0.065 phosphodiesterase 4C isoform PDE4C-2 PDE4C 0.065 phosphodiesterase 4C isoform PDE4C-3 PDE4C 0.065 phosphodiesterase 4C isoform PDE4C-1 PDE9A 0.063 phosphodiesterase 9A isoform g PDE9A 0.063 phosphodiesterase 9A isoform g PDE9A 0.063 phosphodiesterase 9A isoform o PDE9A 0.063 phosphodiesterase 9A isoform n Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.