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Search of human proteins with 186972148
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo
sapiens]
(361 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens] 742 0.0
gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens] 702 0.0
gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens] 667 0.0
gi|169163737 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|113414000 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|113413229 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|82830424 gon-4-like isoform a [Homo sapiens] 30 3.4
gi|82830428 gon-4-like isoform b [Homo sapiens] 30 3.4
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 30 4.4
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 4.4
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 4.4
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 30 4.4
gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens] 30 4.4
gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens] 30 4.4
gi|20986490 YY1-associated protein isoform 3 [Homo sapiens] 30 4.4
gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens] 29 7.5
gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting... 29 7.5
gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens] 29 7.5
gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo sap... 29 7.5
gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein... 28 9.8
gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein ... 28 9.8
>gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens]
Length = 361
Score = 742 bits (1915), Expect = 0.0
Identities = 361/361 (100%), Positives = 361/361 (100%)
Query: 1 MQKMESRGVELPSLWEKALKLIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMD 60
MQKMESRGVELPSLWEKALKLIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMD
Sbjct: 1 MQKMESRGVELPSLWEKALKLIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMD 60
Query: 61 PRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDD 120
PRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDD
Sbjct: 61 PRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDD 120
Query: 121 TLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVE 180
TLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVE
Sbjct: 121 TLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVE 180
Query: 181 WMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKAL 240
WMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKAL
Sbjct: 181 WMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKAL 240
Query: 241 QFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLEN 300
QFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLEN
Sbjct: 241 QFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLEN 300
Query: 301 RVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQE 360
RVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQE
Sbjct: 301 RVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQE 360
Query: 361 N 361
N
Sbjct: 361 N 361
>gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens]
Length = 443
Score = 702 bits (1813), Expect = 0.0
Identities = 341/343 (99%), Positives = 342/343 (99%)
Query: 19 LKLIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 78
L+ IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT
Sbjct: 101 LRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 160
Query: 79 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 138
EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK
Sbjct: 161 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 220
Query: 139 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 198
VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS
Sbjct: 221 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 280
Query: 199 PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 258
PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS
Sbjct: 281 PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 340
Query: 259 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 318
VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM
Sbjct: 341 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 400
Query: 319 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 361
IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 401 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 443
>gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]
Length = 450
Score = 667 bits (1720), Expect = 0.0
Identities = 327/343 (95%), Positives = 328/343 (95%), Gaps = 14/343 (4%)
Query: 19 LKLIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 78
L+ IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT
Sbjct: 122 LRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 181
Query: 79 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 138
EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK
Sbjct: 182 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFK 241
Query: 139 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 198
VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS
Sbjct: 242 VKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTS 301
Query: 199 PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 258
PDDILGHATISK CHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS
Sbjct: 302 PDDILGHATISK--------------CHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLS 347
Query: 259 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 318
VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM
Sbjct: 348 VLLMAKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVM 407
Query: 319 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 361
IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN
Sbjct: 408 IQRASYMPPKDPGYSTEMKEESVKKHQYPDGEVWKKLLPAQEN 450
>gi|169163737 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 30.0 bits (66), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 189 KPLWIEEPTSPDDILGHATISKALVPLGIGIATG 222
+P W+E T+P +LG A+ + L GIG +G
Sbjct: 27 RPSWLEVETAPAQVLGGASSGRGLSGPGIGEGSG 60
>gi|113414000 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 30.0 bits (66), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 189 KPLWIEEPTSPDDILGHATISKALVPLGIGIATG 222
+P W+E T+P +LG A+ + L GIG +G
Sbjct: 27 RPSWLEVETAPAQVLGGASSGRGLSGPGIGEGSG 60
>gi|113413229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 30.0 bits (66), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 189 KPLWIEEPTSPDDILGHATISKALVPLGIGIATG 222
+P W+E T+P +LG A+ + L GIG +G
Sbjct: 27 RPSWLEVETAPAQVLGGASSGRGLSGPGIGEGSG 60
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 30.0 bits (66), Expect = 3.4
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 161 PEKTLMMDANQRWDVPEAVEWMSKLAK------FKPLWIEEPTSPDDILGHATISKALVP 214
P KT+ AN+ +P+ V W+ +K P+ + +P D + L+
Sbjct: 776 PHKTVKKTANEFPCLPKQVAWILATSKVFMYPELLPVCSLKAKNPQDKIVFTKAEDNLLA 835
Query: 215 LGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 256
LG+ G + N +I K LL K L + R+ ++N N
Sbjct: 836 LGLKHFEGTEFPNPLISKYLLTCKTAHQLTV---RIKNLNMN 874
>gi|82830428 gon-4-like isoform b [Homo sapiens]
Length = 1529
Score = 30.0 bits (66), Expect = 3.4
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 161 PEKTLMMDANQRWDVPEAVEWMSKLAK------FKPLWIEEPTSPDDILGHATISKALVP 214
P KT+ AN+ +P+ V W+ +K P+ + +P D + L+
Sbjct: 776 PHKTVKKTANEFPCLPKQVAWILATSKVFMYPELLPVCSLKAKNPQDKIVFTKAEDNLLA 835
Query: 215 LGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 256
LG+ G + N +I K LL K L + R+ ++N N
Sbjct: 836 LGLKHFEGTEFPNPLISKYLLTCKTAHQLTV---RIKNLNMN 874
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 48 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 103
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 5010 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 5068
Query: 104 GYPAYTTS 111
G P+ TS
Sbjct: 5069 GLPSINTS 5076
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 48 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 103
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916
Query: 104 GYPAYTTS 111
G P+ TS
Sbjct: 4917 GLPSINTS 4924
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 48 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 103
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916
Query: 104 GYPAYTTS 111
G P+ TS
Sbjct: 4917 GLPSINTS 4924
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 48 EGKPVWKLLVDMDPRMLVSCIDFR----YITDVLTEEDALEILQKGQIGKKEREKQMLAQ 103
+G+ L +DM+ +ML C D + ++D+L + L+ K Q K + +K +
Sbjct: 4858 QGEEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTK-KLQWKSKEQKRKIQEDKNKQVK 4916
Query: 104 GYPAYTTS 111
G P+ TS
Sbjct: 4917 GLPSINTS 4924
>gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens]
Length = 748
Score = 29.6 bits (65), Expect = 4.4
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 100 MLAQGYPAYTTSCAWLGY---SDDTLKQLCAQALKDGWTRF---------KVKVGADLQD 147
+LA G A+ +CA++ +++ + +L ++DG + V VG +L
Sbjct: 128 LLACGTGAFHPTCAFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVLVGEELYS 187
Query: 148 DMRRCQIIRDMIGPEKTLMMDANQRWDV---PEAVEWMSKLAKFKPLWIEEPTSPDD--- 201
+ D++G + T+ QR + P W+++ K WI E +PDD
Sbjct: 188 G-----VAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKI 242
Query: 202 -ILGHATISKALVPLG-IGIA-TGEQCHNRVIFKQLLQAKALQFLQ 244
T +A LG + ++ G+ C N V ++ L K FL+
Sbjct: 243 YFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLK 288
>gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens]
Length = 749
Score = 29.6 bits (65), Expect = 4.4
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 100 MLAQGYPAYTTSCAWLGY---SDDTLKQLCAQALKDGWTRF---------KVKVGADLQD 147
+LA G A+ +CA++ +++ + +L ++DG + V VG +L
Sbjct: 128 LLACGTGAFHPTCAFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVLVGEELYS 187
Query: 148 DMRRCQIIRDMIGPEKTLMMDANQRWDV---PEAVEWMSKLAKFKPLWIEEPTSPDD--- 201
+ D++G + T+ QR + P W+++ K WI E +PDD
Sbjct: 188 G-----VAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKI 242
Query: 202 -ILGHATISKALVPLG-IGIA-TGEQCHNRVIFKQLLQAKALQFLQ 244
T +A LG + ++ G+ C N V ++ L K FL+
Sbjct: 243 YFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLK 288
>gi|20986490 YY1-associated protein isoform 3 [Homo sapiens]
Length = 750
Score = 29.6 bits (65), Expect = 4.4
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 161 PEKTLMMDANQRWDVPEAVEWMSKLAK------FKPLWIEEPTSPDDILGHATISKALVP 214
P KT+ AN+ +P+ V W+ +K P+ + +P D + L+
Sbjct: 187 PHKTVKKTANEFPCLPKQVAWILATSKVFMYPELLPVCSLKAKNPQDKILFTKAEDNLLA 246
Query: 215 LGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 256
LG+ G + N +I K LL K + L + R+ ++N N
Sbjct: 247 LGLKHFEGTEFLNPLISKYLLTCKTARQLTV---RIKNLNMN 285
>gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens]
Length = 144
Score = 28.9 bits (63), Expect = 7.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 134 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 183
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting,
mitochondrial F0 complex, subunit d [Homo sapiens]
Length = 144
Score = 28.9 bits (63), Expect = 7.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 134 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 183
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]
Length = 160
Score = 28.9 bits (63), Expect = 7.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 134 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 183
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo
sapiens]
Length = 144
Score = 28.9 bits (63), Expect = 7.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 134 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 183
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
>gi|149999365 matrix metalloproteinase 16 isoform 2 preproprotein
[Homo sapiens]
Length = 457
Score = 28.5 bits (62), Expect = 9.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 302 VCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVK 342
+C V ++F V +Q+ Y+PP DP S E+++
Sbjct: 30 LCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQ 70
>gi|13027802 matrix metalloproteinase 16 isoform 1 preproprotein
[Homo sapiens]
Length = 607
Score = 28.5 bits (62), Expect = 9.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 302 VCEYVDHLHEHFKYPVMIQRASYMPPKDPGYSTEMKEESVK 342
+C V ++F V +Q+ Y+PP DP S E+++
Sbjct: 30 LCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQ 70
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,409,081
Number of Sequences: 37866
Number of extensions: 611395
Number of successful extensions: 1346
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1337
Number of HSP's gapped (non-prelim): 21
length of query: 361
length of database: 18,247,518
effective HSP length: 104
effective length of query: 257
effective length of database: 14,309,454
effective search space: 3677529678
effective search space used: 3677529678
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.