Guide to the Human Genome
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Name: CDKN3 Sequence: fasta or formatted (212aa) NCBI GI: 17981704
Description:

cyclin-dependent kinase inhibitor 3 isoform 1

Referenced in:

Cyclins and Related Functions

Other entries for this name:
alt prot [172aa] cyclin-dependent kinase inhibitor 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          9           2
 C cysteine            5.7         12           2
 D aspartate           6.6         14           1
 E glutamate           6.1         13           2
 F phenylalanine       2.8          6           1
 G glycine             5.7         12           2
 H histidine           3.3          7           3
 I isoleucine          7.5         16           2
 K lysine              4.7         10           1
 L leucine            11.3         24           3
 M methionine          0.9          2           1
 N asparagine          2.4          5           1
 P proline             4.2          9           2
 Q glutamine           5.2         11           2
 R arginine            6.1         13           2
 S serine             10.8         23           2
 T threonine           5.2         11           2
 V valine              3.3          7           1
 W tryptophan          0.5          1           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase inhibitor 3 isoform 1 
CDKN3                 0.752   cyclin-dependent kinase inhibitor 3 isoform 2 [Homo...
PTPDC1                0.041   protein tyrosine phosphatase domain containing 1 pro...
PTPDC1                0.041   protein tyrosine phosphatase domain containing 1 pro...
PTP4A2                0.027   protein tyrosine phosphatase type IVA, member 2 isof...
PTPN3                 0.024   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.024   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.024   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.024   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.024   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.024   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN5                 0.022   protein-tyrosine-phosphatase non-receptor 5 isoform ...
PTPN5                 0.022   protein-tyrosine-phosphatase non-receptor 5 isoform ...
PTPN5                 0.022   protein-tyrosine-phosphatase non-receptor 5 isoform ...
PTP4A1                0.022   protein tyrosine phosphatase type IVA, member 1 [Homo...
PTP4A3                0.022   protein tyrosine phosphatase type IVA, member 3 isof...
PTPRT                 0.019   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.019   protein tyrosine phosphatase, receptor type, T isof...
PTPRR                 0.019   protein tyrosine phosphatase, receptor type, R isofor...
PTPRR                 0.019   protein tyrosine phosphatase, receptor type, R isofo...
PTPN7                 0.019   protein tyrosine phosphatase, non-receptor type 7 is...
PTPN7                 0.019   protein tyrosine phosphatase, non-receptor type 7 is...
CDC14B                0.017   CDC14 homolog B isoform 3 
CDC14B                0.017   CDC14 homolog B isoform 1 
CDC14B                0.017   CDC14 homolog B isoform 2 
TNS3                  0.015   tensin 3 
PTEN                  0.015   phosphatase and tensin homolog 
PTPN2                 0.015   protein tyrosine phosphatase, non-receptor type 2 iso...
PTPN2                 0.015   protein tyrosine phosphatase, non-receptor type 2 [H...
PTPN2                 0.015   protein tyrosine phosphatase, non-receptor type 2 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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