Guide to the Human Genome
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Search of human proteins with 17865819

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens]                310   2e-85
gi|66932888 vanin 3 isoform 1 precursor [Homo sapiens]                239   6e-64
gi|66932890 vanin 3 isoform 3 precursor [Homo sapiens]                238   2e-63
gi|17865814 vanin 2 isoform 1 precursor [Homo sapiens]                179   7e-46
gi|223633991 vanin 1 precursor [Homo sapiens]                         149   8e-37
gi|17865816 vanin 2 isoform 2 [Homo sapiens]                          107   3e-24
gi|4557373 biotinidase precursor [Homo sapiens]                        92   2e-19
gi|4758156 diacylglycerol kinase, iota [Homo sapiens]                  29   1.2  
gi|147905700 ectonucleoside triphosphate diphosphohydrolase 1 is...    29   1.6  
gi|45580700 ectonucleoside triphosphate diphosphohydrolase 1 iso...    29   1.6  
gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi...    28   2.8  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    28   3.6  
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    28   3.6  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    28   3.6  
gi|166197702 ectonucleoside triphosphate diphosphohydrolase 3 [H...    28   3.6  
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    28   3.6  
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ...    28   3.6  
gi|34878769 F-box only protein 25 isoform 1 [Homo sapiens]             27   6.1  
gi|34878765 F-box only protein 25 isoform 2 [Homo sapiens]             27   6.1  
gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens]                      27   6.1  
gi|4504993 leukemia inhibitory factor receptor precursor [Homo s...    27   8.0  
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]             27   8.0  
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]             27   8.0  
gi|189083786 leukemia inhibitory factor receptor precursor [Homo...    27   8.0  
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    27   8.0  
gi|55770840 chloride channel 3 isoform e [Homo sapiens]                27   8.0  
gi|197927448 WD repeat domain 6 protein [Homo sapiens]                 27   8.0  
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]                    27   8.0  

>gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens]
          Length = 147

 Score =  310 bits (795), Expect = 2e-85
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60
           MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV
Sbjct: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60

Query: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM 120
           LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM
Sbjct: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM 120

Query: 121 NEPVSKELCYHCHSECNQYGQWKLYRT 147
           NEPVSKELCYHCHSECNQYGQWKLYRT
Sbjct: 121 NEPVSKELCYHCHSECNQYGQWKLYRT 147


>gi|66932888 vanin 3 isoform 1 precursor [Homo sapiens]
          Length = 274

 Score =  239 bits (610), Expect = 6e-64
 Identities = 119/128 (92%), Positives = 120/128 (93%), Gaps = 3/128 (2%)

Query: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60
           MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV
Sbjct: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60

Query: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM 120
           LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR     
Sbjct: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRFG--- 117

Query: 121 NEPVSKEL 128
           N PV + L
Sbjct: 118 NTPVQQRL 125


>gi|66932890 vanin 3 isoform 3 precursor [Homo sapiens]
          Length = 117

 Score =  238 bits (606), Expect = 2e-63
 Identities = 115/115 (100%), Positives = 115/115 (100%)

Query: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60
           MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV
Sbjct: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60

Query: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115
           LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR
Sbjct: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115


>gi|17865814 vanin 2 isoform 1 precursor [Homo sapiens]
          Length = 520

 Score =  179 bits (454), Expect = 7e-46
 Identities = 84/115 (73%), Positives = 99/115 (86%)

Query: 1   MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60
           M+ S FP  VAVFAL+ L VG  D+FIAAVYEHAVILPN+TETPVS+E+AL LMN+NID+
Sbjct: 1   MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI 60

Query: 61  LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115
           LE A+K AA+QGA IIVTPED +YGW FTRE+++PYLEDIPDP VNWIPC+DP R
Sbjct: 61  LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHR 115


>gi|223633991 vanin 1 precursor [Homo sapiens]
          Length = 513

 Score =  149 bits (376), Expect = 8e-37
 Identities = 70/109 (64%), Positives = 80/109 (73%)

Query: 4   SHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDVLEK 63
           +  P  VA+           DTF AAVYEHA ILPN T TPVS+EEAL LMN+N+D+LE 
Sbjct: 3   TQLPAYVAILLFYVSRASCQDTFTAAVYEHAAILPNATLTPVSREEALALMNRNLDILEG 62

Query: 64  AVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRD 112
           A+  AA QGAHIIVTPED IYGW F R+S+YPYLEDIPDP VNWIPC +
Sbjct: 63  AITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNN 111


>gi|17865816 vanin 2 isoform 2 [Homo sapiens]
          Length = 467

 Score =  107 bits (268), Expect = 3e-24
 Identities = 46/62 (74%), Positives = 55/62 (88%)

Query: 54  MNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDP 113
           MN+NID+LE A+K AA+QGA IIVTPED +YGW FTRE+++PYLEDIPDP VNWIPC+DP
Sbjct: 1   MNENIDILETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDP 60

Query: 114 WR 115
            R
Sbjct: 61  HR 62


>gi|4557373 biotinidase precursor [Homo sapiens]
          Length = 543

 Score = 92.0 bits (227), Expect = 2e-19
 Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 1/91 (1%)

Query: 26  FIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYG 85
           ++AAVYEH  IL       +S++EAL LMN+N+D+ E+ V  AA++   IIV PEDGI+G
Sbjct: 58  YVAAVYEHPSILSLNPLALISRQEALELMNQNLDIYEQQVMTAAQKDVQIIVFPEDGIHG 117

Query: 86  WIFTRESIYPYLEDIPDPG-VNWIPCRDPWR 115
           + FTR SIYP+L+ +P P  V W PC +P R
Sbjct: 118 FNFTRTSIYPFLDFMPSPQVVRWNPCLEPHR 148


>gi|4758156 diacylglycerol kinase, iota [Homo sapiens]
          Length = 1065

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 75  IIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKMN-------EPVSKE 127
           I+    DG  GWI    SI   L+  P P V  +P       ++ +N       EPVSK 
Sbjct: 429 ILACGGDGTVGWIL---SILDELQLSPQPPVGVLPLGTGNDLARTLNWGGGYTDEPVSKI 485

Query: 128 LCYHCHSECNQYGQWKLY 145
           LC        Q  +W L+
Sbjct: 486 LCQVEDGTVVQLDRWNLH 503


>gi|147905700 ectonucleoside triphosphate diphosphohydrolase 1
           isoform 2 [Homo sapiens]
          Length = 517

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 53  LMNKNIDVLEKAVKLAAK--QGAHIIVTPEDGIYGWI 87
           L ++ +DV+E+++       QGA II   E+G YGWI
Sbjct: 151 LADRVLDVVERSLSNYPFDFQGARIITGQEEGAYGWI 187


>gi|45580700 ectonucleoside triphosphate diphosphohydrolase 1
           isoform 1 [Homo sapiens]
          Length = 510

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 53  LMNKNIDVLEKAVKLAAK--QGAHIIVTPEDGIYGWI 87
           L ++ +DV+E+++       QGA II   E+G YGWI
Sbjct: 144 LADRVLDVVERSLSNYPFDFQGARIITGQEEGAYGWI 180


>gi|11968059 matrix metalloproteinase 25 preproprotein [Homo
           sapiens]
          Length = 562

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 5/65 (7%)

Query: 82  GIYGWIFTRESIYPYLEDIPDP-GVNWIPCRDPWRKSKKMNEPVSKELCYHCHSEC--NQ 138
           G + W F + SI     D P P G NW+ C  P    +    P +  +   C  +C  NQ
Sbjct: 480 GAHYWRFPKNSIKTE-PDAPQPMGPNWLDCPAPSSGPRAPRPPKATPVSETCDCQCELNQ 538

Query: 139 -YGQW 142
             G+W
Sbjct: 539 AAGRW 543


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
           sapiens]
          Length = 1939

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 12  VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69
           V AL   ++  L T + + + H V  I+PN T+TP + E  L+L     + + + +++  
Sbjct: 651 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 710

Query: 70  K 70
           K
Sbjct: 711 K 711


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 12  VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69
           V AL   ++  L T + + + H V  I+PN T+TP + E  L+L     + + + +++  
Sbjct: 653 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 712

Query: 70  K 70
           K
Sbjct: 713 K 713


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 12  VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69
           V AL   ++  L T + + + H V  I+PN T+TP + E  L+L     + + + +++  
Sbjct: 653 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 712

Query: 70  K 70
           K
Sbjct: 713 K 713


>gi|166197702 ectonucleoside triphosphate diphosphohydrolase 3 [Homo
           sapiens]
          Length = 529

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 71  QGAHIIVTPEDGIYGWIFTRESIYPYLE 98
           +GA II   E+G+YGWI     +  +LE
Sbjct: 172 RGAQIISGQEEGVYGWITANYLMGNFLE 199


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal
           [Homo sapiens]
          Length = 1937

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 12  VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69
           V AL   ++  L T + + + H V  I+PN T+TP + E  L+L     + + + +++  
Sbjct: 650 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 709

Query: 70  K 70
           K
Sbjct: 710 K 710


>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
           sapiens]
          Length = 1939

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 12  VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69
           V AL   ++  L T + + + H V  I+PN T+TP + E  L+L     + + + +++  
Sbjct: 651 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 710

Query: 70  K 70
           K
Sbjct: 711 K 711


>gi|34878769 F-box only protein 25 isoform 1 [Homo sapiens]
          Length = 367

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%)

Query: 95  PYL-EDIPDPGVNWIPCRDPWRKSKKMNEPVSKELCYHCHSECN 137
           P+L +D   PG +WI   D W++ +  ++ + +E     ++ CN
Sbjct: 2   PFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERE-----NNRCN 40


>gi|34878765 F-box only protein 25 isoform 2 [Homo sapiens]
          Length = 358

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%)

Query: 95  PYL-EDIPDPGVNWIPCRDPWRKSKKMNEPVSKELCYHCHSECN 137
           P+L +D   PG +WI   D W++ +  ++ + +E     ++ CN
Sbjct: 2   PFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERE-----NNRCN 40


>gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens]
          Length = 338

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)

Query: 130 YHCHSECNQYGQWKLYR 146
           +HC S CN YG W L+R
Sbjct: 169 HHC-SICNSYGSWDLFR 184


>gi|4504993 leukemia inhibitory factor receptor precursor [Homo
           sapiens]
          Length = 1097

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 9/35 (25%), Positives = 21/35 (60%)

Query: 53  LMNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYGWI 87
           L  +N+ +  + + ++A  G +++ T ED I+G +
Sbjct: 292 LDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTV 326


>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
          Length = 1123

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 12   VFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEAL 51
            V A+  LSVGA     AA  EH+   P   E P+ +E AL
Sbjct: 1087 VSAMALLSVGAEQAQAAAAREHS---PRPAEEPMEQEPAL 1123


>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
          Length = 1122

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 12   VFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEAL 51
            V A+  LSVGA     AA  EH+   P   E P+ +E AL
Sbjct: 1086 VSAMALLSVGAEQAQAAAAREHS---PRPAEEPMEQEPAL 1122


>gi|189083786 leukemia inhibitory factor receptor precursor [Homo
           sapiens]
          Length = 1097

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 9/35 (25%), Positives = 21/35 (60%)

Query: 53  LMNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYGWI 87
           L  +N+ +  + + ++A  G +++ T ED I+G +
Sbjct: 292 LDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTV 326


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
           sapiens]
          Length = 1940

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 12  VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69
           V AL   ++  L + +   + H V  I+PN T+TP + E +L+L     + + + +++  
Sbjct: 648 VSALFRENLNKLMSNLRTTHPHFVRCIIPNETKTPGAMEHSLVLHQLRCNGVLEGIRICR 707

Query: 70  K 70
           K
Sbjct: 708 K 708


>gi|55770840 chloride channel 3 isoform e [Homo sapiens]
          Length = 866

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 32  EHAVILPNRTETPVSKEEALLLMNKNID---VLEKAVKLAAKQGAHIIVTPEDGIYGWIF 88
           +H   LP  +  P+     L +    +     +E  V +  K G    +   +GI   I 
Sbjct: 736 QHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHNGIVLGII 795

Query: 89  TRESIYPYLEDIPDPGVNWIPCRDPWRKSKKMNEP 123
           T+++I  +LE +     +  P   PW  +KK   P
Sbjct: 796 TKKNILEHLEQLKQ---HVEPLAPPWHYNKKRYPP 827


>gi|197927448 WD repeat domain 6 protein [Homo sapiens]
          Length = 1151

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 72  GAHIIVTPEDGIYGWIFTRE-SIYPYLEDIPDPGVNWI 108
           G ++  T  DG Y  +F R+  + P L      G+NW+
Sbjct: 609 GGYVYTTGRDGAYYQLFVRDGQLQPVLRQKSCRGMNWL 646


>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
          Length = 1711

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 61  LEKAVKLAAKQGAHI----IVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRK 116
           +  A +L   QGA I    +V+   G+   + + E+++   E  P PG +++P +DP  K
Sbjct: 846 ISSAGQLTPSQGAPIRPTSVVSEFSGVPS-LSSSEAVHGLPEGQPRPGGSFVPEQDPVTK 904

Query: 117 SK 118
           +K
Sbjct: 905 NK 906


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,867,416
Number of Sequences: 37866
Number of extensions: 241347
Number of successful extensions: 557
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 545
Number of HSP's gapped (non-prelim): 28
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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