BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens] (147 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens] 310 2e-85 gi|66932888 vanin 3 isoform 1 precursor [Homo sapiens] 239 6e-64 gi|66932890 vanin 3 isoform 3 precursor [Homo sapiens] 238 2e-63 gi|17865814 vanin 2 isoform 1 precursor [Homo sapiens] 179 7e-46 gi|223633991 vanin 1 precursor [Homo sapiens] 149 8e-37 gi|17865816 vanin 2 isoform 2 [Homo sapiens] 107 3e-24 gi|4557373 biotinidase precursor [Homo sapiens] 92 2e-19 gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 29 1.2 gi|147905700 ectonucleoside triphosphate diphosphohydrolase 1 is... 29 1.6 gi|45580700 ectonucleoside triphosphate diphosphohydrolase 1 iso... 29 1.6 gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi... 28 2.8 gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 28 3.6 gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 28 3.6 gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 28 3.6 gi|166197702 ectonucleoside triphosphate diphosphohydrolase 3 [H... 28 3.6 gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 28 3.6 gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 28 3.6 gi|34878769 F-box only protein 25 isoform 1 [Homo sapiens] 27 6.1 gi|34878765 F-box only protein 25 isoform 2 [Homo sapiens] 27 6.1 gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens] 27 6.1 gi|4504993 leukemia inhibitory factor receptor precursor [Homo s... 27 8.0 gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] 27 8.0 gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] 27 8.0 gi|189083786 leukemia inhibitory factor receptor precursor [Homo... 27 8.0 gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 27 8.0 gi|55770840 chloride channel 3 isoform e [Homo sapiens] 27 8.0 gi|197927448 WD repeat domain 6 protein [Homo sapiens] 27 8.0 gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 27 8.0 >gi|17865819 vanin 3 isoform 2 precursor [Homo sapiens] Length = 147 Score = 310 bits (795), Expect = 2e-85 Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 1 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV Sbjct: 1 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60 Query: 61 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM 120 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM Sbjct: 61 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM 120 Query: 121 NEPVSKELCYHCHSECNQYGQWKLYRT 147 NEPVSKELCYHCHSECNQYGQWKLYRT Sbjct: 121 NEPVSKELCYHCHSECNQYGQWKLYRT 147 >gi|66932888 vanin 3 isoform 1 precursor [Homo sapiens] Length = 274 Score = 239 bits (610), Expect = 6e-64 Identities = 119/128 (92%), Positives = 120/128 (93%), Gaps = 3/128 (2%) Query: 1 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV Sbjct: 1 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60 Query: 61 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKM 120 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR Sbjct: 61 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRFG--- 117 Query: 121 NEPVSKEL 128 N PV + L Sbjct: 118 NTPVQQRL 125 >gi|66932890 vanin 3 isoform 3 precursor [Homo sapiens] Length = 117 Score = 238 bits (606), Expect = 2e-63 Identities = 115/115 (100%), Positives = 115/115 (100%) Query: 1 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV Sbjct: 1 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60 Query: 61 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR Sbjct: 61 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115 >gi|17865814 vanin 2 isoform 1 precursor [Homo sapiens] Length = 520 Score = 179 bits (454), Expect = 7e-46 Identities = 84/115 (73%), Positives = 99/115 (86%) Query: 1 MIISHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDV 60 M+ S FP VAVFAL+ L VG D+FIAAVYEHAVILPN+TETPVS+E+AL LMN+NID+ Sbjct: 1 MVTSSFPISVAVFALITLQVGTQDSFIAAVYEHAVILPNKTETPVSQEDALNLMNENIDI 60 Query: 61 LEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWR 115 LE A+K AA+QGA IIVTPED +YGW FTRE+++PYLEDIPDP VNWIPC+DP R Sbjct: 61 LETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDPHR 115 >gi|223633991 vanin 1 precursor [Homo sapiens] Length = 513 Score = 149 bits (376), Expect = 8e-37 Identities = 70/109 (64%), Positives = 80/109 (73%) Query: 4 SHFPKCVAVFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDVLEK 63 + P VA+ DTF AAVYEHA ILPN T TPVS+EEAL LMN+N+D+LE Sbjct: 3 TQLPAYVAILLFYVSRASCQDTFTAAVYEHAAILPNATLTPVSREEALALMNRNLDILEG 62 Query: 64 AVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRD 112 A+ AA QGAHIIVTPED IYGW F R+S+YPYLEDIPDP VNWIPC + Sbjct: 63 AITSAADQGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNN 111 >gi|17865816 vanin 2 isoform 2 [Homo sapiens] Length = 467 Score = 107 bits (268), Expect = 3e-24 Identities = 46/62 (74%), Positives = 55/62 (88%) Query: 54 MNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDP 113 MN+NID+LE A+K AA+QGA IIVTPED +YGW FTRE+++PYLEDIPDP VNWIPC+DP Sbjct: 1 MNENIDILETAIKQAAEQGARIIVTPEDALYGWKFTRETVFPYLEDIPDPQVNWIPCQDP 60 Query: 114 WR 115 R Sbjct: 61 HR 62 >gi|4557373 biotinidase precursor [Homo sapiens] Length = 543 Score = 92.0 bits (227), Expect = 2e-19 Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 1/91 (1%) Query: 26 FIAAVYEHAVILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYG 85 ++AAVYEH IL +S++EAL LMN+N+D+ E+ V AA++ IIV PEDGI+G Sbjct: 58 YVAAVYEHPSILSLNPLALISRQEALELMNQNLDIYEQQVMTAAQKDVQIIVFPEDGIHG 117 Query: 86 WIFTRESIYPYLEDIPDPG-VNWIPCRDPWR 115 + FTR SIYP+L+ +P P V W PC +P R Sbjct: 118 FNFTRTSIYPFLDFMPSPQVVRWNPCLEPHR 148 >gi|4758156 diacylglycerol kinase, iota [Homo sapiens] Length = 1065 Score = 29.3 bits (64), Expect = 1.2 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 10/78 (12%) Query: 75 IIVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRKSKKMN-------EPVSKE 127 I+ DG GWI SI L+ P P V +P ++ +N EPVSK Sbjct: 429 ILACGGDGTVGWIL---SILDELQLSPQPPVGVLPLGTGNDLARTLNWGGGYTDEPVSKI 485 Query: 128 LCYHCHSECNQYGQWKLY 145 LC Q +W L+ Sbjct: 486 LCQVEDGTVVQLDRWNLH 503 >gi|147905700 ectonucleoside triphosphate diphosphohydrolase 1 isoform 2 [Homo sapiens] Length = 517 Score = 28.9 bits (63), Expect = 1.6 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 53 LMNKNIDVLEKAVKLAAK--QGAHIIVTPEDGIYGWI 87 L ++ +DV+E+++ QGA II E+G YGWI Sbjct: 151 LADRVLDVVERSLSNYPFDFQGARIITGQEEGAYGWI 187 >gi|45580700 ectonucleoside triphosphate diphosphohydrolase 1 isoform 1 [Homo sapiens] Length = 510 Score = 28.9 bits (63), Expect = 1.6 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 53 LMNKNIDVLEKAVKLAAK--QGAHIIVTPEDGIYGWI 87 L ++ +DV+E+++ QGA II E+G YGWI Sbjct: 144 LADRVLDVVERSLSNYPFDFQGARIITGQEEGAYGWI 180 >gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapiens] Length = 562 Score = 28.1 bits (61), Expect = 2.8 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 82 GIYGWIFTRESIYPYLEDIPDP-GVNWIPCRDPWRKSKKMNEPVSKELCYHCHSEC--NQ 138 G + W F + SI D P P G NW+ C P + P + + C +C NQ Sbjct: 480 GAHYWRFPKNSIKTE-PDAPQPMGPNWLDCPAPSSGPRAPRPPKATPVSETCDCQCELNQ 538 Query: 139 -YGQW 142 G+W Sbjct: 539 AAGRW 543 >gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo sapiens] Length = 1939 Score = 27.7 bits (60), Expect = 3.6 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 12 VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69 V AL ++ L T + + + H V I+PN T+TP + E L+L + + + +++ Sbjct: 651 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 710 Query: 70 K 70 K Sbjct: 711 K 711 >gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo sapiens] Length = 1941 Score = 27.7 bits (60), Expect = 3.6 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 12 VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69 V AL ++ L T + + + H V I+PN T+TP + E L+L + + + +++ Sbjct: 653 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 712 Query: 70 K 70 K Sbjct: 713 K 713 >gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo sapiens] Length = 1941 Score = 27.7 bits (60), Expect = 3.6 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 12 VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69 V AL ++ L T + + + H V I+PN T+TP + E L+L + + + +++ Sbjct: 653 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 712 Query: 70 K 70 K Sbjct: 713 K 713 >gi|166197702 ectonucleoside triphosphate diphosphohydrolase 3 [Homo sapiens] Length = 529 Score = 27.7 bits (60), Expect = 3.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Query: 71 QGAHIIVTPEDGIYGWIFTRESIYPYLE 98 +GA II E+G+YGWI + +LE Sbjct: 172 RGAQIISGQEEGVYGWITANYLMGNFLE 199 >gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo sapiens] Length = 1937 Score = 27.7 bits (60), Expect = 3.6 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 12 VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69 V AL ++ L T + + + H V I+PN T+TP + E L+L + + + +++ Sbjct: 650 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 709 Query: 70 K 70 K Sbjct: 710 K 710 >gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo sapiens] Length = 1939 Score = 27.7 bits (60), Expect = 3.6 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 12 VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69 V AL ++ L T + + + H V I+PN T+TP + E L+L + + + +++ Sbjct: 651 VSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 710 Query: 70 K 70 K Sbjct: 711 K 711 >gi|34878769 F-box only protein 25 isoform 1 [Homo sapiens] Length = 367 Score = 26.9 bits (58), Expect = 6.1 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 95 PYL-EDIPDPGVNWIPCRDPWRKSKKMNEPVSKELCYHCHSECN 137 P+L +D PG +WI D W++ + ++ + +E ++ CN Sbjct: 2 PFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERE-----NNRCN 40 >gi|34878765 F-box only protein 25 isoform 2 [Homo sapiens] Length = 358 Score = 26.9 bits (58), Expect = 6.1 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 95 PYL-EDIPDPGVNWIPCRDPWRKSKKMNEPVSKELCYHCHSECN 137 P+L +D PG +WI D W++ + ++ + +E ++ CN Sbjct: 2 PFLGQDWRSPGWSWIKTEDGWKRCESCSQKLERE-----NNRCN 40 >gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens] Length = 338 Score = 26.9 bits (58), Expect = 6.1 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%) Query: 130 YHCHSECNQYGQWKLYR 146 +HC S CN YG W L+R Sbjct: 169 HHC-SICNSYGSWDLFR 184 >gi|4504993 leukemia inhibitory factor receptor precursor [Homo sapiens] Length = 1097 Score = 26.6 bits (57), Expect = 8.0 Identities = 9/35 (25%), Positives = 21/35 (60%) Query: 53 LMNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYGWI 87 L +N+ + + + ++A G +++ T ED I+G + Sbjct: 292 LDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTV 326 >gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] Length = 1123 Score = 26.6 bits (57), Expect = 8.0 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Query: 12 VFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEAL 51 V A+ LSVGA AA EH+ P E P+ +E AL Sbjct: 1087 VSAMALLSVGAEQAQAAAAREHS---PRPAEEPMEQEPAL 1123 >gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] Length = 1122 Score = 26.6 bits (57), Expect = 8.0 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Query: 12 VFALLALSVGALDTFIAAVYEHAVILPNRTETPVSKEEAL 51 V A+ LSVGA AA EH+ P E P+ +E AL Sbjct: 1086 VSAMALLSVGAEQAQAAAAREHS---PRPAEEPMEQEPAL 1122 >gi|189083786 leukemia inhibitory factor receptor precursor [Homo sapiens] Length = 1097 Score = 26.6 bits (57), Expect = 8.0 Identities = 9/35 (25%), Positives = 21/35 (60%) Query: 53 LMNKNIDVLEKAVKLAAKQGAHIIVTPEDGIYGWI 87 L +N+ + + + ++A G +++ T ED I+G + Sbjct: 292 LDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTV 326 >gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo sapiens] Length = 1940 Score = 26.6 bits (57), Expect = 8.0 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 12 VFALLALSVGALDTFIAAVYEHAV--ILPNRTETPVSKEEALLLMNKNIDVLEKAVKLAA 69 V AL ++ L + + + H V I+PN T+TP + E +L+L + + + +++ Sbjct: 648 VSALFRENLNKLMSNLRTTHPHFVRCIIPNETKTPGAMEHSLVLHQLRCNGVLEGIRICR 707 Query: 70 K 70 K Sbjct: 708 K 708 >gi|55770840 chloride channel 3 isoform e [Homo sapiens] Length = 866 Score = 26.6 bits (57), Expect = 8.0 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 32 EHAVILPNRTETPVSKEEALLLMNKNID---VLEKAVKLAAKQGAHIIVTPEDGIYGWIF 88 +H LP + P+ L + + +E V + K G + +GI I Sbjct: 736 QHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHNGIVLGII 795 Query: 89 TRESIYPYLEDIPDPGVNWIPCRDPWRKSKKMNEP 123 T+++I +LE + + P PW +KK P Sbjct: 796 TKKNILEHLEQLKQ---HVEPLAPPWHYNKKRYPP 827 >gi|197927448 WD repeat domain 6 protein [Homo sapiens] Length = 1151 Score = 26.6 bits (57), Expect = 8.0 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 72 GAHIIVTPEDGIYGWIFTRE-SIYPYLEDIPDPGVNWI 108 G ++ T DG Y +F R+ + P L G+NW+ Sbjct: 609 GGYVYTTGRDGAYYQLFVRDGQLQPVLRQKSCRGMNWL 646 >gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] Length = 1711 Score = 26.6 bits (57), Expect = 8.0 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Query: 61 LEKAVKLAAKQGAHI----IVTPEDGIYGWIFTRESIYPYLEDIPDPGVNWIPCRDPWRK 116 + A +L QGA I +V+ G+ + + E+++ E P PG +++P +DP K Sbjct: 846 ISSAGQLTPSQGAPIRPTSVVSEFSGVPS-LSSSEAVHGLPEGQPRPGGSFVPEQDPVTK 904 Query: 117 SK 118 +K Sbjct: 905 NK 906 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.137 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,867,416 Number of Sequences: 37866 Number of extensions: 241347 Number of successful extensions: 557 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 545 Number of HSP's gapped (non-prelim): 28 length of query: 147 length of database: 18,247,518 effective HSP length: 93 effective length of query: 54 effective length of database: 14,725,980 effective search space: 795202920 effective search space used: 795202920 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.