Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 171460932
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|171460932 protein phosphatase 1M isoform a [Homo sapiens]
(298 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|171460932 protein phosphatase 1M isoform a [Homo sapiens] 596 e-171
gi|171460934 protein phosphatase 1M isoform b [Homo sapiens] 493 e-140
gi|149944715 protein phosphatase 1H (PP2C domain containing) [Ho... 301 6e-82
gi|65506328 protein phosphatase 1J (PP2C domain containing) [Hom... 267 7e-72
gi|122937199 protein phosphatase 1B-like [Homo sapiens] 62 6e-10
gi|63003905 protein phosphatase 1 (formerly 2C)-like [Homo sapiens] 58 1e-08
gi|75813620 protein phosphatase 1B isoform 5 [Homo sapiens] 55 7e-08
gi|75813618 protein phosphatase 1B isoform 4 [Homo sapiens] 55 7e-08
gi|29558022 protein phosphatase 1B isoform 2 [Homo sapiens] 55 7e-08
gi|4505995 protein phosphatase 1B isoform 1 [Homo sapiens] 55 7e-08
gi|7661862 protein phosphatase 1F [Homo sapiens] 50 2e-06
gi|10337595 protein phosphatase 1A isoform 1 [Homo sapiens] 49 4e-06
gi|29557855 protein phosphatase 1A isoform 2 [Homo sapiens] 49 4e-06
gi|193211600 protein phosphatase 1A isoform 3 [Homo sapiens] 49 4e-06
gi|4505999 protein phosphatase 1G [Homo sapiens] 47 3e-05
gi|29826282 protein phosphatase 1G [Homo sapiens] 47 3e-05
gi|13540531 integrin-linked kinase-associated protein phosphatas... 45 8e-05
gi|45439339 pyruvate dehyrogenase phosphatase catalytic subunit ... 44 1e-04
gi|239985428 pyruvate dehyrogenase phosphatase catalytic subunit... 44 1e-04
gi|239985426 pyruvate dehyrogenase phosphatase catalytic subunit... 44 1e-04
gi|239985422 pyruvate dehyrogenase phosphatase catalytic subunit... 44 1e-04
gi|239985420 pyruvate dehyrogenase phosphatase catalytic subunit... 44 1e-04
gi|41349497 pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo... 44 2e-04
gi|167466276 protein phosphatase 1K (PP2C domain containing) [Ho... 39 0.004
gi|5174703 mitogen-activated protein kinase kinase kinase 7 inte... 38 0.009
gi|41281798 mitogen-activated protein kinase kinase kinase 7 int... 38 0.009
gi|30089948 protein phosphatase 1E [Homo sapiens] 36 0.036
gi|215598574 ankyrin 1 isoform 9 [Homo sapiens] 28 7.5
gi|70780359 ankyrin 1 isoform 1 [Homo sapiens] 28 7.5
gi|70780357 ankyrin 1 isoform 3 [Homo sapiens] 28 7.5
>gi|171460932 protein phosphatase 1M isoform a [Homo sapiens]
Length = 298
Score = 596 bits (1536), Expect = e-171
Identities = 298/298 (100%), Positives = 298/298 (100%)
Query: 1 MHLNGRCICPSDPQFVEEKGIRAEDLVIGALESAFQECDEVIGRELEASGQMGGCTALVA 60
MHLNGRCICPSDPQFVEEKGIRAEDLVIGALESAFQECDEVIGRELEASGQMGGCTALVA
Sbjct: 1 MHLNGRCICPSDPQFVEEKGIRAEDLVIGALESAFQECDEVIGRELEASGQMGGCTALVA 60
Query: 61 VSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLE 120
VSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLE
Sbjct: 61 VSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLE 120
Query: 121 FPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGD 180
FPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGD
Sbjct: 121 FPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGD 180
Query: 181 HQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRS 240
HQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRS
Sbjct: 181 HQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRS 240
Query: 241 FLPGNQEDPHRFSKLAQMLIHSTQGKEDSLTEEGQVSYDDVSVFVIPLHSQGQESSDH 298
FLPGNQEDPHRFSKLAQMLIHSTQGKEDSLTEEGQVSYDDVSVFVIPLHSQGQESSDH
Sbjct: 241 FLPGNQEDPHRFSKLAQMLIHSTQGKEDSLTEEGQVSYDDVSVFVIPLHSQGQESSDH 298
>gi|171460934 protein phosphatase 1M isoform b [Homo sapiens]
Length = 247
Score = 493 bits (1269), Expect = e-140
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 52 MGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPEL 111
MGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPEL
Sbjct: 1 MGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPEL 60
Query: 112 LAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGT 171
LAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGT
Sbjct: 61 LAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGT 120
Query: 172 LAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSN 231
LAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSN
Sbjct: 121 LAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSN 180
Query: 232 EQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLTEEGQVSYDDVSVFVIPLHSQ 291
EQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLTEEGQVSYDDVSVFVIPLHSQ
Sbjct: 181 EQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLTEEGQVSYDDVSVFVIPLHSQ 240
Query: 292 GQESSDH 298
GQESSDH
Sbjct: 241 GQESSDH 247
>gi|149944715 protein phosphatase 1H (PP2C domain containing) [Homo
sapiens]
Length = 514
Score = 301 bits (770), Expect = 6e-82
Identities = 154/286 (53%), Positives = 209/286 (73%), Gaps = 7/286 (2%)
Query: 10 PSDP--QFVEEKGIRAEDLVIGALESAFQECDEVIGRELEASGQMGGCTALVAVSLQGKL 67
PS P +F EK I E LVIGALESAF+E D I RE + GGCTAL+ + L GKL
Sbjct: 222 PSTPPTRFFTEKKIPHECLVIGALESAFKEMDLQIERERSSYNISGGCTALIVICLLGKL 281
Query: 68 YMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLEFPRRLKG 127
Y+ANAGDSRAI++R EI P+S EFTPETERQR+Q LAF+ P LL EFT LEFPRR++
Sbjct: 282 YVANAGDSRAIIIRNGEIIPMSSEFTPETERQRLQYLAFMQPHLLGNEFTHLEFPRRVQR 341
Query: 128 DDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRVLD 187
+LG+K+L+RD +M+GW+YK +E DLK+PLI+G+G++AR++ T+ V+RGLGDH L+V D
Sbjct: 342 KELGKKMLYRDFNMTGWAYKTIEDEDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVHD 401
Query: 188 TNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPG-NQ 246
+NI +KPFL S P+V + D+ + + DDV+++ATDGLWDVLSNE+VA + FLP +
Sbjct: 402 SNIYIKPFLSSAPEVRIYDLSKYDHGSDDVLILATDGLWDVLSNEEVAEAITQFLPNCDP 461
Query: 247 EDPHRFSKLAQMLIHSTQG----KEDSLTEEGQVSYDDVSVFVIPL 288
+DPHR++ AQ L+ +G + ++ + S DD+SV+VIPL
Sbjct: 462 DDPHRYTLAAQDLVMRARGVLKDRGWRISNDRLGSGDDISVYVIPL 507
>gi|65506328 protein phosphatase 1J (PP2C domain containing) [Homo
sapiens]
Length = 505
Score = 267 bits (683), Expect = 7e-72
Identities = 145/299 (48%), Positives = 196/299 (65%), Gaps = 10/299 (3%)
Query: 2 HLNGRCICPSDPQFVEEKGIRAEDLVIGALESAFQECDEVIGRELEASGQMGGCTALVAV 61
HL G C S +K + E LV+GA+E+AFQ DE + RE GGC ALV +
Sbjct: 212 HLLGPQSCWSS-----QKEVSHESLVVGAVENAFQLMDEQMARERRGHQVEGGCCALVVI 266
Query: 62 SLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLEF 121
L GK+Y+ANAGDSRAI+VR EI P+S EFTPETERQR+Q L F+ PELL EFT LEF
Sbjct: 267 YLLGKVYVANAGDSRAIIVRNGEIIPMSREFTPETERQRLQLLGFLKPELLGSEFTHLEF 326
Query: 122 PRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDH 181
PRR+ +LGQ++L+RD +M+GW+YK++E DL++PL+ G+G++AR++ T+ V+RGLGDH
Sbjct: 327 PRRVLPKELGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDH 386
Query: 182 QLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSF 241
L+V + + +KPFL P+V V D+ Q E DDV+V+ TDGLWDV ++ +VA V
Sbjct: 387 SLKVCSSTLPIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTTDCEVAATVDRV 446
Query: 242 LPGNQEDPH-RFSKLAQMLIHSTQGKEDS----LTEEGQVSYDDVSVFVIPLHSQGQES 295
L + + H R++ LAQ L+ +G L S DD+SVFVIPL G S
Sbjct: 447 LSAYEPNDHSRYTALAQALVLGARGTPRDRGWRLPNNKLGSGDDISVFVIPLGGPGSYS 505
>gi|122937199 protein phosphatase 1B-like [Homo sapiens]
Length = 430
Score = 62.0 bits (149), Expect = 6e-10
Identities = 66/243 (27%), Positives = 97/243 (39%), Gaps = 68/243 (27%)
Query: 2 HLNGRCICPSDPQFVEEKGIRAEDLVIGALESAFQECDEVIGRELEASGQMGGCTALVAV 61
HL G + P+ E +G+R AL AF DE + R L + GGCTA+V +
Sbjct: 117 HLPGHVLQELGPEPSEPEGVRE------ALRRAFLSADERL-RSLWPRVETGGCTAVVLL 169
Query: 62 SLQGKLYMANAGDSRAILVRRDEIRPLSFEFTP--ETERQRIQQLAFVYPELLAGEFTRL 119
LY+A+ GDSRA+L R + + + P ER+RI
Sbjct: 170 VSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERI------------------ 211
Query: 120 EFPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLG 179
H +G G R+ R+ G+LAVSR LG
Sbjct: 212 --------------------HAAG-----------------GTIRRRRVEGSLAVSRALG 234
Query: 180 DHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVR 239
D + + + P+V L ED+ +++A+DG+WD +S +A LV
Sbjct: 235 DFTYKEAPGRPPELQLVSAEPEVAAL----ARQAEDEFMLLASDGVWDTVSGAALAGLVA 290
Query: 240 SFL 242
S L
Sbjct: 291 SRL 293
>gi|63003905 protein phosphatase 1 (formerly 2C)-like [Homo sapiens]
Length = 360
Score = 57.8 bits (138), Expect = 1e-08
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 70/244 (28%)
Query: 31 LESAFQECDEVIGRELEASGQMGGCTALVAVSLQGKLYMANAGDSRAILVRRD-EIRPLS 89
LE D + +L S G T L+A+ L +AN GDSR +L +D PLS
Sbjct: 169 LEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLS 228
Query: 90 FEFTPET--ERQRIQQLAFVYPELLAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYK 147
+ P ER+RI++ AG F W
Sbjct: 229 HDHKPYQLKERKRIKR---------AGGFISFN---------------------GSW--- 255
Query: 148 RVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDV 207
R+ G LA+SR LGD+ L+ L+ ++ P + D+
Sbjct: 256 -------------------RVQGILAMSRSLGDYPLKNLNV-------VIPDPDILTFDL 289
Query: 208 DQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKE 267
D+L+ + +++A+DGLWD SNE+ ++ L ++PH F + +L +G
Sbjct: 290 DKLQ---PEFMILASDGLWDAFSNEEAVRFIKERL----DEPH-FGAKSIVLQSFYRGCP 341
Query: 268 DSLT 271
D++T
Sbjct: 342 DNIT 345
>gi|75813620 protein phosphatase 1B isoform 5 [Homo sapiens]
Length = 380
Score = 55.1 bits (131), Expect = 7e-08
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 167 RLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLW 226
R+ G+LAVSR LGD+ + +D + + P+V + L +ED+ +++A DG+W
Sbjct: 191 RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI----LRAEEDEFIILACDGIW 246
Query: 227 DVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLT 271
DV+SNE++ V+S L + + + + + +H +G D+++
Sbjct: 247 DVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLH--KGSRDNMS 289
>gi|75813618 protein phosphatase 1B isoform 4 [Homo sapiens]
Length = 327
Score = 55.1 bits (131), Expect = 7e-08
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 167 RLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLW 226
R+ G+LAVSR LGD+ + +D + + P+V + L +ED+ +++A DG+W
Sbjct: 191 RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI----LRAEEDEFIILACDGIW 246
Query: 227 DVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLT 271
DV+SNE++ V+S L + + + + + +H +G D+++
Sbjct: 247 DVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLH--KGSRDNMS 289
>gi|29558022 protein phosphatase 1B isoform 2 [Homo sapiens]
Length = 387
Score = 55.1 bits (131), Expect = 7e-08
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 167 RLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLW 226
R+ G+LAVSR LGD+ + +D + + P+V + L +ED+ +++A DG+W
Sbjct: 191 RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI----LRAEEDEFIILACDGIW 246
Query: 227 DVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLT 271
DV+SNE++ V+S L + + + + + +H +G D+++
Sbjct: 247 DVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLH--KGSRDNMS 289
>gi|4505995 protein phosphatase 1B isoform 1 [Homo sapiens]
Length = 479
Score = 55.1 bits (131), Expect = 7e-08
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 167 RLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLW 226
R+ G+LAVSR LGD+ + +D + + P+V + L +ED+ +++A DG+W
Sbjct: 191 RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI----LRAEEDEFIILACDGIW 246
Query: 227 DVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLT 271
DV+SNE++ V+S L + + + + + +H +G D+++
Sbjct: 247 DVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLH--KGSRDNMS 289
>gi|7661862 protein phosphatase 1F [Homo sapiens]
Length = 454
Score = 50.4 bits (119), Expect = 2e-06
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 79/260 (30%)
Query: 29 GALESAFQECDEVIGRELEASGQMGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPL 88
GAL AF+ D++ R+ + G T + A+ L++A GDS+ ILV++ ++ L
Sbjct: 229 GALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKL 288
Query: 89 SFEFTPE--TERQRIQQLAFVYPELLAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSY 146
PE E+ RI+ L G F HM W
Sbjct: 289 MEPHRPERQDEKARIEAL---------GGFV---------------------SHMDCW-- 316
Query: 147 KRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLD 206
R+ GTLAVSR +GD + KP++
Sbjct: 317 --------------------RVNGTLAVSRAIGD---------VFQKPYVSGEADA---- 343
Query: 207 VDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGK 266
+ +D +++A DG +DV+ +++V LV+S L Q R +A+ L+ + +
Sbjct: 344 ASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHLTRQQGSGLR---VAEELVAAAR-- 398
Query: 267 EDSLTEEGQVSYDDVSVFVI 286
E G S+D+++V V+
Sbjct: 399 -----ERG--SHDNITVMVV 411
>gi|10337595 protein phosphatase 1A isoform 1 [Homo sapiens]
Length = 382
Score = 49.3 bits (116), Expect = 4e-06
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 64/237 (27%)
Query: 11 SDPQFVEEKGIRAEDLVIGALESAFQECDE---VIGRELEASGQMGGCTALVAVSLQGKL 67
++ F G + + V + + F E DE V+ + + + G V +S Q
Sbjct: 81 NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQ-HT 139
Query: 68 YMANAGDSRAILVRRDEIRPLSFEFTPET--ERQRIQQLAFVYPELLAGEFTRLEFPRRL 125
Y N GDSR +L R ++ + + P E++RIQ AG ++ R+
Sbjct: 140 YFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQN---------AGGSVMIQ---RV 187
Query: 126 KGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRV 185
G + L D Y +HG+G +L+
Sbjct: 188 NGSLAVSRAL----------------GDFDYKCVHGKGPTEQLVS--------------- 216
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFL 242
P+ V D+++ E ++D +++A DG+WDV+ NE++ VRS L
Sbjct: 217 --------------PEPEVHDIERSE-EDDQFIILACDGIWDVMGNEELCDFVRSRL 258
>gi|29557855 protein phosphatase 1A isoform 2 [Homo sapiens]
Length = 324
Score = 49.3 bits (116), Expect = 4e-06
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 64/237 (27%)
Query: 11 SDPQFVEEKGIRAEDLVIGALESAFQECDE---VIGRELEASGQMGGCTALVAVSLQGKL 67
++ F G + + V + + F E DE V+ + + + G V +S Q
Sbjct: 81 NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQ-HT 139
Query: 68 YMANAGDSRAILVRRDEIRPLSFEFTPET--ERQRIQQLAFVYPELLAGEFTRLEFPRRL 125
Y N GDSR +L R ++ + + P E++RIQ AG ++ R+
Sbjct: 140 YFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQN---------AGGSVMIQ---RV 187
Query: 126 KGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRV 185
G + L D Y +HG+G +L+
Sbjct: 188 NGSLAVSRAL----------------GDFDYKCVHGKGPTEQLVS--------------- 216
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFL 242
P+ V D+++ E ++D +++A DG+WDV+ NE++ VRS L
Sbjct: 217 --------------PEPEVHDIERSE-EDDQFIILACDGIWDVMGNEELCDFVRSRL 258
>gi|193211600 protein phosphatase 1A isoform 3 [Homo sapiens]
Length = 455
Score = 49.3 bits (116), Expect = 4e-06
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 64/237 (27%)
Query: 11 SDPQFVEEKGIRAEDLVIGALESAFQECDE---VIGRELEASGQMGGCTALVAVSLQGKL 67
++ F G + + V + + F E DE V+ + + + G V +S Q
Sbjct: 154 NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQ-HT 212
Query: 68 YMANAGDSRAILVRRDEIRPLSFEFTPET--ERQRIQQLAFVYPELLAGEFTRLEFPRRL 125
Y N GDSR +L R ++ + + P E++RIQ AG ++ R+
Sbjct: 213 YFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQN---------AGGSVMIQ---RV 260
Query: 126 KGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRV 185
G + L D Y +HG+G +L+
Sbjct: 261 NGSLAVSRAL----------------GDFDYKCVHGKGPTEQLVS--------------- 289
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFL 242
P+ V D+++ E ++D +++A DG+WDV+ NE++ VRS L
Sbjct: 290 --------------PEPEVHDIERSE-EDDQFIILACDGIWDVMGNEELCDFVRSRL 331
>gi|4505999 protein phosphatase 1G [Homo sapiens]
Length = 546
Score = 46.6 bits (109), Expect = 3e-05
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 62/205 (30%)
Query: 47 EASGQMGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAF 106
E G G TA+VA+ +L +ANAGDSR ++ + +S++ PE E
Sbjct: 321 EEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEV-------- 372
Query: 107 VYPELLAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQA 166
E R++ + G KV
Sbjct: 373 --------ELARIK--------NAGGKVTM----------------------------DG 388
Query: 167 RLLGTLAVSRGLGDHQLRVLDTNIQLKP---FLLSVPQVTVLDVDQLELQEDDVVVMATD 223
R+ G L +SR +GDH + N L P + ++P + VL + + + +V+A D
Sbjct: 389 RVNGGLNLSRAIGDHFYK---RNKNLPPEEQMISALPDIKVLTLTD----DHEFMVIACD 441
Query: 224 GLWDVLSNEQVAWLVRSFLPGNQED 248
G+W+V+S+++V ++S + E+
Sbjct: 442 GIWNVMSSQEVVDFIQSKISQRDEN 466
>gi|29826282 protein phosphatase 1G [Homo sapiens]
Length = 546
Score = 46.6 bits (109), Expect = 3e-05
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 62/205 (30%)
Query: 47 EASGQMGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAF 106
E G G TA+VA+ +L +ANAGDSR ++ + +S++ PE E
Sbjct: 321 EEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEV-------- 372
Query: 107 VYPELLAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQA 166
E R++ + G KV
Sbjct: 373 --------ELARIK--------NAGGKVTM----------------------------DG 388
Query: 167 RLLGTLAVSRGLGDHQLRVLDTNIQLKP---FLLSVPQVTVLDVDQLELQEDDVVVMATD 223
R+ G L +SR +GDH + N L P + ++P + VL + + + +V+A D
Sbjct: 389 RVNGGLNLSRAIGDHFYK---RNKNLPPEEQMISALPDIKVLTLTD----DHEFMVIACD 441
Query: 224 GLWDVLSNEQVAWLVRSFLPGNQED 248
G+W+V+S+++V ++S + E+
Sbjct: 442 GIWNVMSSQEVVDFIQSKISQRDEN 466
>gi|13540531 integrin-linked kinase-associated protein phosphatase
2C [Homo sapiens]
Length = 392
Score = 45.1 bits (105), Expect = 8e-05
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 63/225 (28%)
Query: 21 IRAEDLVIGALESAFQECDEVIGRELEAS--GQMGGCTALVAVSLQGKLYMANAGDSRAI 78
I E V L F+ DE ++ + G TA +++ LY+AN GDSRAI
Sbjct: 181 ISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAI 240
Query: 79 LVRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLEFPRRLKGDDLGQKVLFRD 138
L R +E E Q+ L+ L+ E ++ R+
Sbjct: 241 LCRYNE------------ESQKHAALS------LSKEHNPTQYEERM------------- 269
Query: 139 HHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLS 198
R++K+ G R R+LG L VSR +GD Q + + + S
Sbjct: 270 ---------RIQKAG-------GNVRDGRVLGVLEVSRSIGDGQYK--------RCGVTS 305
Query: 199 VPQVTVLDVDQLELQEDD-VVVMATDGLWDVLSNEQVAWLVRSFL 242
VP D+ + +L +D +++A DGL+ V + E+ + S L
Sbjct: 306 VP-----DIRRCQLTPNDRFILLACDGLFKVFTPEEAVNFILSCL 345
>gi|45439339 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 3 precursor [Homo sapiens]
Length = 537
Score = 44.3 bits (103), Expect = 1e-04
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 58/239 (24%)
Query: 30 ALESAFQECDEVIGRELEASGQ------------MGGCTALVAVSLQGKLYMANAGDSRA 77
AL +AF+ D I E + G TA VA L++AN GDSRA
Sbjct: 235 ALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRA 294
Query: 78 ILVRRDE-----IRPLSFEFTPETERQRIQQLAFVYPELLAGEFTR------LEFPRRLK 126
+L ++E LS + + ER+ +++L +P+ A + L P R
Sbjct: 295 MLGVQEEDGSWSAVTLSNDHNAQNERE-LERLKLEHPKSEAKSVVKQDRLLGLLMPFRAF 353
Query: 127 GDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQL-RV 185
GD V F+ WS DL+ +I Q L D++ +
Sbjct: 354 GD-----VKFK------WSI------DLQKRVIESGPDQ------------LNDNEYTKF 384
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPG 244
+ N P+L + P+VT + +D +V+ATDGLW+ + + V +V +L G
Sbjct: 385 IPPNYHTPPYLTAEPEVTYHRLRP----QDKFLVLATDGLWETMHRQDVVRIVGEYLTG 439
>gi|239985428 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 3 precursor [Homo sapiens]
Length = 537
Score = 44.3 bits (103), Expect = 1e-04
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 58/239 (24%)
Query: 30 ALESAFQECDEVIGRELEASGQ------------MGGCTALVAVSLQGKLYMANAGDSRA 77
AL +AF+ D I E + G TA VA L++AN GDSRA
Sbjct: 235 ALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRA 294
Query: 78 ILVRRDE-----IRPLSFEFTPETERQRIQQLAFVYPELLAGEFTR------LEFPRRLK 126
+L ++E LS + + ER+ +++L +P+ A + L P R
Sbjct: 295 MLGVQEEDGSWSAVTLSNDHNAQNERE-LERLKLEHPKSEAKSVVKQDRLLGLLMPFRAF 353
Query: 127 GDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQL-RV 185
GD V F+ WS DL+ +I Q L D++ +
Sbjct: 354 GD-----VKFK------WSI------DLQKRVIESGPDQ------------LNDNEYTKF 384
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPG 244
+ N P+L + P+VT + +D +V+ATDGLW+ + + V +V +L G
Sbjct: 385 IPPNYHTPPYLTAEPEVTYHRLRP----QDKFLVLATDGLWETMHRQDVVRIVGEYLTG 439
>gi|239985426 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 2 [Homo sapiens]
Length = 562
Score = 44.3 bits (103), Expect = 1e-04
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 58/239 (24%)
Query: 30 ALESAFQECDEVIGRELEASGQ------------MGGCTALVAVSLQGKLYMANAGDSRA 77
AL +AF+ D I E + G TA VA L++AN GDSRA
Sbjct: 260 ALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRA 319
Query: 78 ILVRRDE-----IRPLSFEFTPETERQRIQQLAFVYPELLAGEFTR------LEFPRRLK 126
+L ++E LS + + ER+ +++L +P+ A + L P R
Sbjct: 320 MLGVQEEDGSWSAVTLSNDHNAQNERE-LERLKLEHPKSEAKSVVKQDRLLGLLMPFRAF 378
Query: 127 GDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQL-RV 185
GD V F+ WS DL+ +I Q L D++ +
Sbjct: 379 GD-----VKFK------WSI------DLQKRVIESGPDQ------------LNDNEYTKF 409
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPG 244
+ N P+L + P+VT + +D +V+ATDGLW+ + + V +V +L G
Sbjct: 410 IPPNYHTPPYLTAEPEVTYHRLRP----QDKFLVLATDGLWETMHRQDVVRIVGEYLTG 464
>gi|239985422 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 2 [Homo sapiens]
Length = 562
Score = 44.3 bits (103), Expect = 1e-04
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 58/239 (24%)
Query: 30 ALESAFQECDEVIGRELEASGQ------------MGGCTALVAVSLQGKLYMANAGDSRA 77
AL +AF+ D I E + G TA VA L++AN GDSRA
Sbjct: 260 ALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRA 319
Query: 78 ILVRRDE-----IRPLSFEFTPETERQRIQQLAFVYPELLAGEFTR------LEFPRRLK 126
+L ++E LS + + ER+ +++L +P+ A + L P R
Sbjct: 320 MLGVQEEDGSWSAVTLSNDHNAQNERE-LERLKLEHPKSEAKSVVKQDRLLGLLMPFRAF 378
Query: 127 GDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQL-RV 185
GD V F+ WS DL+ +I Q L D++ +
Sbjct: 379 GD-----VKFK------WSI------DLQKRVIESGPDQ------------LNDNEYTKF 409
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPG 244
+ N P+L + P+VT + +D +V+ATDGLW+ + + V +V +L G
Sbjct: 410 IPPNYHTPPYLTAEPEVTYHRLRP----QDKFLVLATDGLWETMHRQDVVRIVGEYLTG 464
>gi|239985420 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 1 [Homo sapiens]
Length = 596
Score = 44.3 bits (103), Expect = 1e-04
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 58/239 (24%)
Query: 30 ALESAFQECDEVIGRELEASGQ------------MGGCTALVAVSLQGKLYMANAGDSRA 77
AL +AF+ D I E + G TA VA L++AN GDSRA
Sbjct: 294 ALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRA 353
Query: 78 ILVRRDE-----IRPLSFEFTPETERQRIQQLAFVYPELLAGEFTR------LEFPRRLK 126
+L ++E LS + + ER+ +++L +P+ A + L P R
Sbjct: 354 MLGVQEEDGSWSAVTLSNDHNAQNERE-LERLKLEHPKSEAKSVVKQDRLLGLLMPFRAF 412
Query: 127 GDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQL-RV 185
GD V F+ WS DL+ +I Q L D++ +
Sbjct: 413 GD-----VKFK------WSI------DLQKRVIESGPDQ------------LNDNEYTKF 443
Query: 186 LDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPG 244
+ N P+L + P+VT + +D +V+ATDGLW+ + + V +V +L G
Sbjct: 444 IPPNYHTPPYLTAEPEVTYHRLRP----QDKFLVLATDGLWETMHRQDVVRIVGEYLTG 498
>gi|41349497 pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo
sapiens]
Length = 529
Score = 43.9 bits (102), Expect = 2e-04
Identities = 69/261 (26%), Positives = 100/261 (38%), Gaps = 95/261 (36%)
Query: 18 EKGIRAEDLVIGALESAFQECDEVIGRELEASGQ------------MGGCTALVAVSLQG 65
E G+ E+ AL +FQ D I E++A + G TA +A
Sbjct: 222 EMGLSIEE----ALMYSFQRLDSDISLEIQAPLEDEVTRNLSLQVAFSGATACMAHVDGI 277
Query: 66 KLYMANAGDSRAIL-VRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLEFPRR 124
L++ANAGD RAIL V+ D G ++ L
Sbjct: 278 HLHVANAGDCRAILGVQEDN-----------------------------GMWSCLP---- 304
Query: 125 LKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGR----QARLLGTLAVSRGLGD 180
L RDH+ ++ + E S LK + R + RLLG L R GD
Sbjct: 305 ----------LTRDHN----AWNQAELSRLKREHPESEDRTIIMEDRLLGVLIPCRAFGD 350
Query: 181 HQLR--------VLDTNIQLK---------------PFLLSVPQVTVLDVDQLELQEDDV 217
QL+ +L+ + P+L + P+VT + +D
Sbjct: 351 VQLKWSKELQRSILERGFNTEALNIYQFTPPHYYTPPYLTAEPEVTYHRLRP----QDKF 406
Query: 218 VVMATDGLWDVLSNEQVAWLV 238
+V+A+DGLWD+LSNE V LV
Sbjct: 407 LVLASDGLWDMLSNEDVVRLV 427
>gi|167466276 protein phosphatase 1K (PP2C domain containing) [Homo
sapiens]
Length = 372
Score = 39.3 bits (90), Expect = 0.004
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 31 LESAFQECDEVIGRELEASGQM----GGCTALVAVSLQG-KLYMANAGDSRAILVRRDEI 85
L AF E D+ S G TA VA+ G +L +A+ GDSRAIL R+ +
Sbjct: 160 LTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKP 219
Query: 86 RPLSFEFTPE--TERQRIQQ 103
L+ + TPE E++RI++
Sbjct: 220 MKLTIDHTPERKDEKERIKK 239
>gi|5174703 mitogen-activated protein kinase kinase kinase 7
interacting protein 1 isoform alpha [Homo sapiens]
Length = 504
Score = 38.1 bits (87), Expect = 0.009
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 53 GGCTALVAVSLQGKLYMANAGDSRAILVRRD----EIRPLSFEFTPETERQ--RIQQL 104
GG A+VAV L KLY+AN G +RA+L + ++ L+ + T E E + R+ QL
Sbjct: 164 GGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQL 221
>gi|41281798 mitogen-activated protein kinase kinase kinase 7
interacting protein 1 isoform beta [Homo sapiens]
Length = 462
Score = 38.1 bits (87), Expect = 0.009
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 53 GGCTALVAVSLQGKLYMANAGDSRAILVRRD----EIRPLSFEFTPETERQ--RIQQL 104
GG A+VAV L KLY+AN G +RA+L + ++ L+ + T E E + R+ QL
Sbjct: 164 GGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQL 221
>gi|30089948 protein phosphatase 1E [Homo sapiens]
Length = 755
Score = 36.2 bits (82), Expect = 0.036
Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 76/248 (30%)
Query: 30 ALESAFQECDEVIGRELEASGQMGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPLS 89
AL AF+ DE ++ G T +V L++A GDS+ +LVR+ + L
Sbjct: 305 ALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELM 364
Query: 90 FEFTP--ETERQRIQQLAFVYPELLAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYK 147
P E E+QRI+ LG V++ W
Sbjct: 365 KPHKPDREDEKQRIEA--------------------------LGGCVVW----FGAW--- 391
Query: 148 RVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRVLDTNIQLKPFLL--SVPQVTVL 205
R+ G+L+VSR +GD + KP++ + TVL
Sbjct: 392 -------------------RVNGSLSVSRAIGD---------AEHKPYICGDADSASTVL 423
Query: 206 DVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQ- 264
D +D +++A DG +D ++ ++ +V L N D S +A L+ S +
Sbjct: 424 D------GTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDS---SMVAHKLVASARD 474
Query: 265 -GKEDSLT 271
G D++T
Sbjct: 475 AGSSDNIT 482
>gi|215598574 ankyrin 1 isoform 9 [Homo sapiens]
Length = 1897
Score = 28.5 bits (62), Expect = 7.5
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 206 DVDQLELQEDDVVVM-ATDGLWDVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQ 264
++ LEL EDD V AT+GL D+L E+ LPG++
Sbjct: 1655 ELGSLELVEDDTVDSDATNGLIDLLEQEE-GQRSEEKLPGSK------------------ 1695
Query: 265 GKEDSLTEEGQVSYDDVSVFVIPLHSQGQESSDH 298
++D T GQ S ++VS ++ H +GQ H
Sbjct: 1696 -RQDDATGAGQDSENEVS--LVSGHQRGQARITH 1726
>gi|70780359 ankyrin 1 isoform 1 [Homo sapiens]
Length = 1881
Score = 28.5 bits (62), Expect = 7.5
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 206 DVDQLELQEDDVVVM-ATDGLWDVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQ 264
++ LEL EDD V AT+GL D+L E+ LPG++
Sbjct: 1614 ELGSLELVEDDTVDSDATNGLIDLLEQEE-GQRSEEKLPGSK------------------ 1654
Query: 265 GKEDSLTEEGQVSYDDVSVFVIPLHSQGQESSDH 298
++D T GQ S ++VS ++ H +GQ H
Sbjct: 1655 -RQDDATGAGQDSENEVS--LVSGHQRGQARITH 1685
>gi|70780357 ankyrin 1 isoform 3 [Homo sapiens]
Length = 1880
Score = 28.5 bits (62), Expect = 7.5
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 23/94 (24%)
Query: 206 DVDQLELQEDDVVVM-ATDGLWDVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQ 264
++ LEL EDD V AT+GL D+L E+ LPG++
Sbjct: 1614 ELGSLELVEDDTVDSDATNGLIDLLEQEE-GQRSEEKLPGSK------------------ 1654
Query: 265 GKEDSLTEEGQVSYDDVSVFVIPLHSQGQESSDH 298
++D T GQ S ++VS ++ H +GQ H
Sbjct: 1655 -RQDDATGAGQDSENEVS--LVSGHQRGQARITH 1685
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,887,934
Number of Sequences: 37866
Number of extensions: 457109
Number of successful extensions: 1026
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 966
Number of HSP's gapped (non-prelim): 52
length of query: 298
length of database: 18,247,518
effective HSP length: 102
effective length of query: 196
effective length of database: 14,385,186
effective search space: 2819496456
effective search space used: 2819496456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.