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Search of human proteins with 170671738
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170671738 hypothetical protein LOC135927 [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170671738 hypothetical protein LOC135927 [Homo sapiens] 306 4e-84
gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens] 30 0.72
gi|4503825 frizzled 1 [Homo sapiens] 29 1.6
gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens] 28 2.1
gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens] 28 2.1
gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens] 28 2.8
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ... 28 2.8
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [... 28 2.8
gi|209863002 MAP-kinase activating death domain-containing prote... 27 4.7
gi|209862998 MAP-kinase activating death domain-containing prote... 27 4.7
gi|209862987 MAP-kinase activating death domain-containing prote... 27 4.7
gi|209862983 MAP-kinase activating death domain-containing prote... 27 4.7
gi|209862979 MAP-kinase activating death domain-containing prote... 27 4.7
gi|209862975 MAP-kinase activating death domain-containing prote... 27 4.7
gi|209862971 MAP-kinase activating death domain-containing prote... 27 4.7
gi|209571517 MAP-kinase activating death domain-containing prote... 27 4.7
gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sap... 27 4.7
gi|4507137 acidic alpha 1 syntrophin [Homo sapiens] 27 4.7
gi|20070228 nucleobindin 1 [Homo sapiens] 27 4.7
gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Ho... 27 4.7
gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens] 27 6.1
gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens] 27 6.1
gi|46409310 zinc finger protein 467 [Homo sapiens] 27 6.1
gi|223972612 Crm, cramped-like [Homo sapiens] 27 8.0
gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapi... 27 8.0
gi|76880480 hypothetical protein LOC9865 [Homo sapiens] 27 8.0
>gi|170671738 hypothetical protein LOC135927 [Homo sapiens]
Length = 147
Score = 306 bits (784), Expect = 4e-84
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MGQEVHGSCWALGAGGGQRQWVGRSMPPLAPQLCRAVFLVPILLLLQVKPLNGSPGPKDG 60
MGQEVHGSCWALGAGGGQRQWVGRSMPPLAPQLCRAVFLVPILLLLQVKPLNGSPGPKDG
Sbjct: 1 MGQEVHGSCWALGAGGGQRQWVGRSMPPLAPQLCRAVFLVPILLLLQVKPLNGSPGPKDG 60
Query: 61 SQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAAVHKHSFHLSFCFS 120
SQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAAVHKHSFHLSFCFS
Sbjct: 61 SQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAAVHKHSFHLSFCFS 120
Query: 121 LASVMVFSGGPLRRTFPNIQLCFMLTH 147
LASVMVFSGGPLRRTFPNIQLCFMLTH
Sbjct: 121 LASVMVFSGGPLRRTFPNIQLCFMLTH 147
>gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens]
Length = 338
Score = 30.0 bits (66), Expect = 0.72
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 23 GRSMPPLAPQLCRAVFLVPILLLLQVK--PLNGSP 55
G ++P L +CR +F +PI LLL+++ PL G P
Sbjct: 64 GSNLPSLELLICRCLFHLPIALLLKLRGDPLLGPP 98
>gi|4503825 frizzled 1 [Homo sapiens]
Length = 647
Score = 28.9 bits (63), Expect = 1.6
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 7 GSCWALGAGG--------GQRQWVGRSMPPLAP-----QLCRAVFLVPILLLLQVKPLNG 53
G+ W L AG G GR PP+ P QL ++L+ LLL V+
Sbjct: 16 GASWELCAGALSARLAEEGSGDAGGRRRPPVDPRRLARQLLLLLWLLEAPLLLGVRAQAA 75
Query: 54 SPGPKDGSQTEKTPSADQNQEQFEEHF 80
GP G + P Q+Q + +
Sbjct: 76 GQGPGQGPGPGQQPPPPPQQQQSGQQY 102
>gi|150456436 hypothetical protein LOC55719 isoform 1 [Homo sapiens]
Length = 1173
Score = 28.5 bits (62), Expect = 2.1
Identities = 10/44 (22%), Positives = 26/44 (59%)
Query: 64 EKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAA 107
EK P +E+F +H + G++ ++ D++++ D++ ++A
Sbjct: 362 EKRPDGPHQKEKFIKHIALKTPGDVLRLEDISKEPSDETDGSSA 405
>gi|209915547 hypothetical protein LOC55719 isoform 2 [Homo sapiens]
Length = 1186
Score = 28.5 bits (62), Expect = 2.1
Identities = 10/44 (22%), Positives = 26/44 (59%)
Query: 64 EKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKTAA 107
EK P +E+F +H + G++ ++ D++++ D++ ++A
Sbjct: 362 EKRPDGPHQKEKFIKHIALKTPGDVLRLEDISKEPSDETDGSSA 405
>gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo
sapiens]
Length = 338
Score = 28.1 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 25 SMPPLAPQLCRAVFLVPILLLLQVK--PLNGSP 55
++P L +CR +F +PI LLL+++ PL G P
Sbjct: 66 NLPSLELLICRCLFHLPIALLLKLRGDPLLGPP 98
>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 28.1 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 25 SMPPLAPQLCRAVFLVPILLLLQVK--PLNGSP 55
++P L +CR +F +PI LLL+++ PL G P
Sbjct: 66 NLPSLELLICRCLFHLPIALLLKLRGDPLLGPP 98
>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 28.1 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 25 SMPPLAPQLCRAVFLVPILLLLQVK--PLNGSP 55
++P L +CR +F +PI LLL+++ PL G P
Sbjct: 66 NLPSLELVICRCLFHLPIALLLKLRGDPLLGPP 98
>gi|209863002 MAP-kinase activating death domain-containing protein
isoform j [Homo sapiens]
Length = 1541
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1029 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1080
>gi|209862998 MAP-kinase activating death domain-containing protein
isoform i [Homo sapiens]
Length = 1544
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1029 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1080
>gi|209862987 MAP-kinase activating death domain-containing protein
isoform f [Homo sapiens]
Length = 1479
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1029 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1080
>gi|209862983 MAP-kinase activating death domain-containing protein
isoform e [Homo sapiens]
Length = 1608
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1092 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1143
>gi|209862979 MAP-kinase activating death domain-containing protein
isoform c [Homo sapiens]
Length = 1545
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1029 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1080
>gi|209862975 MAP-kinase activating death domain-containing protein
isoform b [Homo sapiens]
Length = 1565
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1049 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1100
>gi|209862971 MAP-kinase activating death domain-containing protein
isoform a [Homo sapiens]
Length = 1588
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1072 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1123
>gi|209571517 MAP-kinase activating death domain-containing protein
isoform h [Homo sapiens]
Length = 1587
Score = 27.3 bits (59), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 56 GPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQ-VVDMAQQEEDQSSKTA 106
GP+ S T K P + EE+F+AS E+ + V D+ + EE +S +A
Sbjct: 1072 GPRAPSATGKGPKELDTRSLKEENFIASIGPEVIKPVFDLGETEEKKSQISA 1123
>gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo
sapiens]
Length = 1258
Score = 27.3 bits (59), Expect = 4.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 20 QWVGRSMPPLAPQLCRAVFLVPILLLLQVKPLNG 53
QW R +P L P L +L LLL VK ++G
Sbjct: 797 QWSSRQLPTLKPILADIEYLQDQHLLLTVKSMDG 830
>gi|4507137 acidic alpha 1 syntrophin [Homo sapiens]
Length = 505
Score = 27.3 bits (59), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 45 LLQVKPLNGSPGPKDGSQTEKTPS 68
+L V P +G PGP+ G+ E+ P+
Sbjct: 39 VLTVSPADGDPGPEPGAPREQEPA 62
>gi|20070228 nucleobindin 1 [Homo sapiens]
Length = 461
Score = 27.3 bits (59), Expect = 4.7
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 26 MPPLAPQLCRAVFLVPILLLLQVKPLNGSPGPKDGSQTEKTPSAD 70
MPP P+ + L+P+LLLL ++ + P + E+TP+ +
Sbjct: 1 MPPSGPR--GTLLLLPLLLLLLLRAVLAVPLERGAPNKEETPATE 43
>gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Homo
sapiens]
Length = 569
Score = 27.3 bits (59), Expect = 4.7
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 47 QVKPLNGSPGPKDGSQTEKTPSA---DQNQEQFEEHFVASSVGEMWQVVDMAQQE 98
+VK LN G + E+ PS+ QEQ EE + SSV E+ Q++ +QE
Sbjct: 376 EVKRLNEE---NQGLRAEQLPSSAPQGSQQEQGEEESLPSSVPELQQLLCCTRQE 427
>gi|113722120 G protein-coupled receptor 98 precursor [Homo sapiens]
Length = 6306
Score = 26.9 bits (58), Expect = 6.1
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 46 LQVKPLNGSPGPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSKT 105
L+ P NG+ P G + + AD+ ++F++ A G V D + Q T
Sbjct: 6228 LKPSPQNGATFPSSGGYGQGSLIADEESQEFDDLIFALKTGAGLSVSDNESGQGSQEGGT 6287
>gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]
Length = 414
Score = 26.9 bits (58), Expect = 6.1
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 49 KPLNGSPGPKDGSQTEKTPSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQ 101
+P G P P G ++ +AD + ++F + F+++ V + D+ ++E +Q
Sbjct: 42 RPHTGPPLPTPGPDRDRELTADSDVDEFLDKFLSAGVKQS----DLPRKETEQ 90
>gi|46409310 zinc finger protein 467 [Homo sapiens]
Length = 595
Score = 26.9 bits (58), Expect = 6.1
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 54 SPGPKDGSQTEKT--PSADQNQEQFEEHFVASSVGEMWQVVDMAQQEEDQSSK 104
+P P++G+ TE+ P Q + V + GE W + + ++EDQ ++
Sbjct: 54 APTPEEGAHTEQAEAPCRGQACSAQKAQPVGTCPGEEWMIRKVKVEDEDQEAE 106
>gi|223972612 Crm, cramped-like [Homo sapiens]
Length = 1269
Score = 26.6 bits (57), Expect = 8.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 50 PLNGSPGPKDGSQTEKTPSADQNQEQFEEHFVASSV 85
P G+ GP + PS Q Q + HF+ SSV
Sbjct: 52 PRAGADGPPAPPGAPQAPSPPQGSPQDQHHFLRSSV 87
>gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo
sapiens]
Length = 410
Score = 26.6 bits (57), Expect = 8.0
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Query: 11 ALGAGG-----GQRQWVGRSMPPLAP 31
ALGAGG G R+ VGR PP+ P
Sbjct: 81 ALGAGGWAGWRGPREVVGREPPPVPP 106
>gi|76880480 hypothetical protein LOC9865 [Homo sapiens]
Length = 811
Score = 26.6 bits (57), Expect = 8.0
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 7/68 (10%)
Query: 23 GRSMPPLAPQLCRAVFLVPILLLLQVKPLNGSPGPKDGSQTEKTPSADQNQEQFEEHFVA 82
G + +P + A P L L KP G P D + E TP+A
Sbjct: 488 GPGLQQPSPSVAAAAGPAPQSLDLHKKPQRGRPTRADPALAEPTPTASPGS-------AP 540
Query: 83 SSVGEMWQ 90
S G+ WQ
Sbjct: 541 SPAGDPWQ 548
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,594,993
Number of Sequences: 37866
Number of extensions: 296966
Number of successful extensions: 927
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 919
Number of HSP's gapped (non-prelim): 26
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.