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Search of human proteins with 169217085
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169217085 PREDICTED: hypothetical protein [Homo sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217085 PREDICTED: hypothetical protein [Homo sapiens] 273 2e-74
gi|239752331 PREDICTED: hypothetical protein XP_002348206 [Homo ... 273 2e-74
gi|239746844 PREDICTED: hypothetical protein XP_002343865 [Homo ... 273 2e-74
gi|169214011 PREDICTED: hypothetical protein [Homo sapiens] 29 0.92
gi|113428768 PREDICTED: hypothetical protein [Homo sapiens] 29 0.92
gi|113428351 PREDICTED: hypothetical protein [Homo sapiens] 29 0.92
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 29 0.92
gi|169213725 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|169214202 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|169213543 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|47458048 hemojuvelin isoform a precursor [Homo sapiens] 29 1.2
gi|9966841 cell death regulator aven [Homo sapiens] 28 1.6
gi|46048439 N-acetyltransferase 6 [Homo sapiens] 28 2.7
gi|116235480 leucine zipper transcription regulator 2 [Homo sapi... 27 3.5
gi|239756530 PREDICTED: hypothetical protein [Homo sapiens] 27 3.5
gi|15082238 heat shock protein, alpha-crystallin-related, B9 [Ho... 27 3.5
gi|38261973 adiponectin receptor 2 [Homo sapiens] 27 6.0
gi|24308390 tRNA splicing endonuclease 15 isoform 1 [Homo sapiens] 27 6.0
gi|188528677 tRNA splicing endonuclease 15 isoform 2 [Homo sapiens] 27 6.0
gi|55956788 nucleolin [Homo sapiens] 26 7.8
gi|115527076 src kinase associated phosphoprotein 1 isoform 2 [H... 26 7.8
>gi|169217085 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 273 bits (699), Expect = 2e-74
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG 60
MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG
Sbjct: 1 MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG 60
Query: 61 GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW 120
GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW
Sbjct: 61 GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW 120
Query: 121 ADRLSLAEKS 130
ADRLSLAEKS
Sbjct: 121 ADRLSLAEKS 130
>gi|239752331 PREDICTED: hypothetical protein XP_002348206 [Homo
sapiens]
Length = 130
Score = 273 bits (699), Expect = 2e-74
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG 60
MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG
Sbjct: 1 MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG 60
Query: 61 GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW 120
GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW
Sbjct: 61 GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW 120
Query: 121 ADRLSLAEKS 130
ADRLSLAEKS
Sbjct: 121 ADRLSLAEKS 130
>gi|239746844 PREDICTED: hypothetical protein XP_002343865 [Homo
sapiens]
Length = 130
Score = 273 bits (699), Expect = 2e-74
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG 60
MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG
Sbjct: 1 MKSKREFATAQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVFQVG 60
Query: 61 GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW 120
GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW
Sbjct: 61 GRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQDW 120
Query: 121 ADRLSLAEKS 130
ADRLSLAEKS
Sbjct: 121 ADRLSLAEKS 130
>gi|169214011 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 29.3 bits (64), Expect = 0.92
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 86 GSRVVREGLGLAPEFSRGRGGGWGRGAWFPP 116
G + R GLG A + RGR GG G G PP
Sbjct: 118 GRGLHRRGLGRAEQPERGRAGGPGAGPRTPP 148
>gi|113428768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 29.3 bits (64), Expect = 0.92
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 86 GSRVVREGLGLAPEFSRGRGGGWGRGAWFPP 116
G + R GLG A + RGR GG G G PP
Sbjct: 118 GRGLHRRGLGRAEQPERGRAGGPGAGPRTPP 148
>gi|113428351 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 29.3 bits (64), Expect = 0.92
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 86 GSRVVREGLGLAPEFSRGRGGGWGRGAWFPP 116
G + R GLG A + RGR GG G G PP
Sbjct: 118 GRGLHRRGLGRAEQPERGRAGGPGAGPRTPP 148
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 29.3 bits (64), Expect = 0.92
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 46 QGHGAMQNTVVFQVGGRQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRG 105
+G+GA + V + GG G + + +L R G R +R L P RGRG
Sbjct: 36 RGNGAERVRVALRRGGGATGPGGAEPGEDTALLRLLGLRRGLRRLRR-LWAGPRVQRGRG 94
Query: 106 GGWGRGAWFP 115
G GRG W P
Sbjct: 95 RGRGRG-WGP 103
>gi|169213725 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 94 LGLAPEFSRGRGGGWGRGAWFPPSQDW 120
L L ++ RG GG W GAW P S W
Sbjct: 57 LSLHWDWGRGAGGSWSGGAW-PGSPGW 82
>gi|169214202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 94 LGLAPEFSRGRGGGWGRGAWFPPSQDW 120
L L ++ RG GG W GAW P S W
Sbjct: 57 LSLHWDWGRGAGGSWSGGAW-PGSPGW 82
>gi|169213543 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 94 LGLAPEFSRGRGGGWGRGAWFPPSQDW 120
L L ++ RG GG W GAW P S W
Sbjct: 57 LSLHWDWGRGAGGSWSGGAW-PGSPGW 82
>gi|47458048 hemojuvelin isoform a precursor [Homo sapiens]
Length = 426
Score = 28.9 bits (63), Expect = 1.2
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 54 TVVFQVGGRQIGRCQSLFCQTVHTATMLERRGG--SRVVREGLGLAPEFSRGRGGGWGRG 111
T++ + G +C+ L C + ++ L RGG S +R G G GRGGG G G
Sbjct: 24 TLLLLLCGHAHSQCKILRCNAEYVSSTLSLRGGGSSGALRGGGG------GGRGGGVGSG 77
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 28.5 bits (62), Expect = 1.6
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 86 GSRVVREGLGLAPEFSRGRGGGWGRGAWFPPSQD 119
G+R R G G AP SR GGWG GA P D
Sbjct: 61 GARGGRGGGG-APRGSRREPGGWGAGASAPVEDD 93
>gi|46048439 N-acetyltransferase 6 [Homo sapiens]
Length = 308
Score = 27.7 bits (60), Expect = 2.7
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 62 RQIGRCQSLFCQTVHTATMLERRGGSRVVREGLGLAPEFSRGRG 105
R + + QSL +TV A L RG R + EGL + F+R RG
Sbjct: 150 RVLNQPQSLLVETVVVARALRGRGFGRRLMEGLEV---FARARG 190
>gi|116235480 leucine zipper transcription regulator 2 [Homo
sapiens]
Length = 1060
Score = 27.3 bits (59), Expect = 3.5
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 100 FSRGRGGGWGRGA 112
FSRGRGGG GRG+
Sbjct: 973 FSRGRGGGEGRGS 985
>gi|239756530 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 27.3 bits (59), Expect = 3.5
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 78 ATMLERRGGSRVVREGLGLAPEFS-RGRGGGWGRGAWFPPSQDWADRL 124
AT ERR G + L PE GR GG R PP WA +L
Sbjct: 189 ATAAERRAGGKDASLVQHLVPEVRVGGRRGGSSRDHPAPPGAYWAGQL 236
>gi|15082238 heat shock protein, alpha-crystallin-related, B9
[Homo sapiens]
Length = 159
Score = 27.3 bits (59), Expect = 3.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 31 QEDYNHGKNDYSLHIQGHGAMQNTVVFQVGGR 62
QED +H ++ + + + HG +V QV G+
Sbjct: 44 QEDNDHARDGFQMKLDAHGFAPEELVVQVDGQ 75
>gi|38261973 adiponectin receptor 2 [Homo sapiens]
Length = 386
Score = 26.6 bits (57), Expect = 6.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 10 AQVAGLHSARSQEKHEYDIDKQEDYNHGKNDYSLHIQGHGAMQNTVVF 57
A V H +S E+HEY D+ + G S +Q H AM+ F
Sbjct: 48 ASVLSSHHKKSSEEHEYS-DEAPQEDEGFMGMSPLLQAHHAMEKMEEF 94
>gi|24308390 tRNA splicing endonuclease 15 isoform 1 [Homo sapiens]
Length = 171
Score = 26.6 bits (57), Expect = 6.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 81 LERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFP 115
+E RG S GL P RG G G G +W P
Sbjct: 1 MEERGDSEPTPGCSGLGPGGVRGFGDGGGAPSWAP 35
>gi|188528677 tRNA splicing endonuclease 15 isoform 2 [Homo sapiens]
Length = 129
Score = 26.6 bits (57), Expect = 6.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 81 LERRGGSRVVREGLGLAPEFSRGRGGGWGRGAWFP 115
+E RG S GL P RG G G G +W P
Sbjct: 1 MEERGDSEPTPGCSGLGPGGVRGFGDGGGAPSWAP 35
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 26.2 bits (56), Expect = 7.8
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 84 RGGSRVVREGLGLAPEFSRGRGGGWGRGAW 113
RGG R R G G RGRGG GRG +
Sbjct: 666 RGGGRGGRGGFG-----GRGRGGFGGRGGF 690
>gi|115527076 src kinase associated phosphoprotein 1 isoform 2 [Homo
sapiens]
Length = 358
Score = 26.2 bits (56), Expect = 7.8
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 25 EYDIDKQEDYNHGKNDYSLHIQG----HGAMQNTVVFQVG 60
E+D+++ E K DY+ + QG HG + + FQ G
Sbjct: 278 EHDLEEDESGTRRKGDYASYYQGLWDCHGDQPDELSFQRG 317
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,135,943
Number of Sequences: 37866
Number of extensions: 219502
Number of successful extensions: 736
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 719
Number of HSP's gapped (non-prelim): 24
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.